For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4467 (-)

annotation: ABC transporter, permease protein UspE
coordinates: 4548976 - 4549770
length: 264

VIYAGLLLGAVITLLPFGLGLLTSFTSAQQFVTESPLSLPRPPTLANYLGLADAGFGRAIAVTALMTAVI
LLGQLVFSVLAAYAFARLEFPGRDVLFWVYLATLMVPATVTVVPLYLIMAEAGLRNTFWALVLPFVFGSP
YAIFLLREYFRGIPGDLINAARLDGANTLDIITHVVVPASRPILVTLAMITVVSQWNNFLWPLVISSGDT
WRVLTVATAGLQTQYNAQWTLVMAATTVAIVPLIVVFATLSRHIVRSIVVTGIK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4467--100% (264)ABC transporter, permease protein UspE
M. smegmatis MC2 155MSMEG_0517-3e-4235.63% (261) sugar binding-protein dependent transporter system permease
M. smegmatis MC2 155MSMEG_0507-1e-3734.11% (258) sugar ABC transporter, permease protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2344uspB1e-11879.47% (263) sugar-transport integral membrane protein ABC transporter
M. gilvum PYR-GCKMflv_3853-7e-2927.92% (265) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv2317uspB1e-11879.47% (263) sugar-transport integral membrane protein ABC transporter
M. leprae Br4923MLBr_01769uspE1e-11777.27% (264) sugar transport integral membrane protein
M. abscessus ATCC 19977MAB_1716c-1e-11071.59% (264) sugar ABC transporter, permease protein
M. marinum MMMAR_3618uspB1e-12079.55% (264) sugar-transport integral membrane protein ABC transporter
M. avium 104MAV_2089uspE1e-11877.57% (263) ABC transporter, permease protein UspE
M. thermoresistible (build 8)TH_2009-7e-2728.57% (259) sugar ABC transporter permease protein
M. ulcerans Agy99MUL_1247uspB1e-11878.03% (264) sugar-transport integral membrane protein ABC transporter
M. vanbaalenii PYR-1Mvan_2542-2e-2827.55% (265) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3618|M.marinum_M               -------------MTSLSRRLSRRVPTTVIYAGLVLGALITLLPFALGLL
MUL_1247|M.ulcerans_Agy99           ------------------------MPTRVIYAGLVLGALITLLPFALGLL
MLBr_01769|M.leprae_Br4923          -------------MSSPSR-----LSNAVTYAGLTLGALITVAPFALGLL
MAV_2089|M.avium_104                -------------MTSPDR----ARANIAIYAGLLVGALITLAPFTLGLL
Mb2344|M.bovis_AF2122/97            -------------MSSPSR-----VSNTAVYAVLTIGAVITLSPFLLGLL
Rv2317|M.tuberculosis_H37Rv         -------------MSSPSR-----VSNTAVYAVLTIGAVITLSPFLLGLL
MSMEG_4467|M.smegmatis_MC2_155      ----------------------------MIYAGLLLGAVITLLPFGLGLL
MAB_1716c|M.abscessus_ATCC_199      --------------MTWSR-------NVLVYLLLTVGAVLTLGPFLLAVS
Mflv_3853|M.gilvum_PYR-GCK          ----------------------MTKNTKWWTIAGIVIVIYSFVPMLWMIS
Mvan_2542|M.vanbaalenii_PYR-1       ----------------------MTKNTKWWTIAGIVIVIYSFVPMLWMIS
TH_2009|M.thermoresistible__bu      MSTATVTTTAPVPTEPSKAAKVKRRSFDPWGVVAWIAAIGFFFPVFWMVL
                                                                       : .:  . *.   : 

MMAR_3618|M.marinum_M               TSFTSAHQFATGTPLQLPHPPTLANYADLGG-AGFGRAALVTALMTAVIL
MUL_1247|M.ulcerans_Agy99           TSFTSAHQFATGTPLQLPHPPTLTNYADLGG-AGFGRAALVTALMTTVIL
MLBr_01769|M.leprae_Br4923          TSFTSAHQFTTGTPLQLPRPPTLANYAGLSG-AGFLRATAVTALMTAVIL
MAV_2089|M.avium_104                TAFTSAHQFVTGTPLQLPRPPTLSNFADLAG-AGFGRAGAVTALMTAVIL
Mb2344|M.bovis_AF2122/97            TSFTSAHQFATGTPLQLPRPPTLANYADIAD-AGFRRAAVVTALMTAVIL
Rv2317|M.tuberculosis_H37Rv         TSFTSAHQFATGTPLQLPRPPTLANYADIAD-AGFRRAAVVTALMTAVIL
MSMEG_4467|M.smegmatis_MC2_155      TSFTSAQQFVTESPLSLPRPPTLANYLGLAD-AGFGRAIAVTALMTAVIL
MAB_1716c|M.abscessus_ATCC_199      ASLKTAKQFATGTPLAPPNPFTLANYTGLAD-AGFGRAALVTVLMTAIIV
Mflv_3853|M.gilvum_PYR-GCK          LAFKPPSDIVSGEPSFLPSTVTFDNFAQIFSNPLFTRALINSIGIALVAT
Mvan_2542|M.vanbaalenii_PYR-1       LAFKPPSDIVSGKPSFLPSSITFDNFAQIFSQPLFTRALINSIGIAVIAT
TH_2009|M.thermoresistible__bu      TAFKQEVDAYTTTPKVFFAP-TLDQFRAVFD-QGIGTALLNSLFATVVST
                                     ::.   :  :  *     . *: ::  : .   :  *   :   : :  

MMAR_3618|M.marinum_M               LGQMTFSVLAAYAFARLEFPGRDGLFWVYIATLMVPATVTVVPLYLMMAQ
MUL_1247|M.ulcerans_Agy99           LGQMTFSVLAAYAFARLEFPGRDGLFWVYIATLMVPATVTVVPLYLMMAQ
MLBr_01769|M.leprae_Br4923          LGQLTFSVLAGYAFARLRFPGRDTLFWAYIMTLMVPATVTVVPMYMMMAQ
MAV_2089|M.avium_104                VGQLTFSVLAGYAFARLRFPGRDALFWVYIATLMVPGTVTIVPMYLMMAQ
Mb2344|M.bovis_AF2122/97            LGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQ
Rv2317|M.tuberculosis_H37Rv         LGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQ
MSMEG_4467|M.smegmatis_MC2_155      LGQLVFSVLAAYAFARLEFPGRDVLFWVYLATLMVPATVTVVPLYLIMAE
MAB_1716c|M.abscessus_ATCC_199      IGQLTFSVLAAYAFARLRFPGRDGLFWIYLATLMIPATVTVVPMYLMLTQ
Mflv_3853|M.gilvum_PYR-GCK          VISVIIAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRG
Mvan_2542|M.vanbaalenii_PYR-1       VISVIIAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRG
TH_2009|M.thermoresistible__bu      LLVLALGVPAAFALSLRPVRKTQDALFFFMSTKMLPIVAAIIPLYVIVSN
                                    :  : :.: *.:*::   .   .  :   :   *.* .. : *:: :   

MMAR_3618|M.marinum_M               LGLRNTFWALVLPFL-FGSPYAIFLLREHFRIIPNDMINAARLDGANTLD
MUL_1247|M.ulcerans_Agy99           LGLRNTFWALVLPFL-FGSPYAIFLLREHFRIIPNDMINAARLDGANTLD
MLBr_01769|M.leprae_Br4923          VGLRNTFWALVLPFM-FGSPYAIFLLREHFRIIPNDLINAARLDGANTLD
MAV_2089|M.avium_104                LGLRNTFWALVLPFM-FGSPYAIFLLREHFRMIPNDLVNAARLDGAHTLD
Mb2344|M.bovis_AF2122/97            LGLRNTFWALVLPFM-FGSPYAIFLLREHFRLIPDDLINAARLDGANTLD
Rv2317|M.tuberculosis_H37Rv         LGLRNTFWALVLPFM-FGSPYAIFLLREHFRLIPDDLINAARLDGANTLD
MSMEG_4467|M.smegmatis_MC2_155      AGLRNTFWALVLPFV-FGSPYAIFLLREYFRGIPGDLINAARLDGANTLD
MAB_1716c|M.abscessus_ATCC_199      VGLRNTFWALVIPFM-FGSPYAIFLLREHFRTIPDDLIRAARLDGANTLD
Mflv_3853|M.gilvum_PYR-GCK          LGIYDTWLGLIIPYLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQ
Mvan_2542|M.vanbaalenii_PYR-1       LGIYDTWLGLIIPYLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQ
TH_2009|M.thermoresistible__bu      VGLLDNIWALIILYTAMNLPIAVWMMRSFFLEVPGELLEAASLDGAGTWR
                                     *: :.  .*:: :  :  * ::: :  .*  :* :: .** :***    

MMAR_3618|M.marinum_M               LLVHVVIPSSRPVLAAMTLITVVSQWNNFMWPLVITSGHKWRVLTVATAD
MUL_1247|M.ulcerans_Agy99           VLVHVVIPSNRPVLAAMTLITVVSQWNNFMWPLVITSGHKWRVLTVATAD
MLBr_01769|M.leprae_Br4923          VIVHVVIPSNRSVLAALTLITVVSQWNNFMWPLVITSGNKWRVLTVATAD
MAV_2089|M.avium_104                VIVHVVIPSSRPVLAALALITVVSQWNNFMWPLVITSGHKWRVLTVATAD
Mb2344|M.bovis_AF2122/97            VIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATAD
Rv2317|M.tuberculosis_H37Rv         VIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATAD
MSMEG_4467|M.smegmatis_MC2_155      IITHVVVPASRPILVTLAMITVVSQWNNFLWPLVISSGDTWRVLTVATAG
MAB_1716c|M.abscessus_ATCC_199      ILWHVVVPVSRPILITLTLITVVSQWNNFMWPLVITSGGNWRVLTVATAG
Mflv_3853|M.gilvum_PYR-GCK          AFRKVIVPLAAPGVFTTAILTFFFCWNDFLFAISLTSTDSARTVPAALAF
Mvan_2542|M.vanbaalenii_PYR-1       AFRKVIVPLAAPGVFTTAILTFFFCWNDFLFAISLTSTDSARTVPAALAF
TH_2009|M.thermoresistible__bu      TMREVILPIVSPGIAATALICVIFAWNEFFFAVNLTAVQAQTMPVFLVGF
                                     : .*::*   . : : ::: ..  **:*::.: :::           . 

MMAR_3618|M.marinum_M               LQ--SRFNAQWTLVMAATTVAIVPLIVLFVAAQRHIVSSIVVSGLK-
MUL_1247|M.ulcerans_Agy99           LQ--SRFNAQWTLVMAATTVAIVPLIVLFVAAQRHIVSSIAVSGLK-
MLBr_01769|M.leprae_Br4923          LQ--SRFNAQWTLVMAATTVAIVPLIVLFVGFQRHIIPSIVVSGLK-
MAV_2089|M.avium_104                LQ--TRFNAQWTLVMAATTIAIVPLVTLFVIFQRHIVASIVVSGLK-
Mb2344|M.bovis_AF2122/97            LQ--SRFNDQWTLVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK-
Rv2317|M.tuberculosis_H37Rv         LQ--SRFNDQWTLVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK-
MSMEG_4467|M.smegmatis_MC2_155      LQ--TQYNAQWTLVMAATTVAIVPLIVVFATLSRHIVRSIVVTGIK-
MAB_1716c|M.abscessus_ATCC_199      LQ--SQFNAQWPIVMAATTVAIVPLVILFVAFQKYIVRSITLSGLK-
Mflv_3853|M.gilvum_PYR-GCK          FQGASYFESPVPYIMAASVIVTIPVVILVLVFQRRIVAGLTSGAVKG
Mvan_2542|M.vanbaalenii_PYR-1       FQGASYFESPVPYIMAASVIVTIPVVILVLIFQRRIVAGLTSGAVKG
TH_2009|M.thermoresistible__bu      IAG---EGLYWAKLCAASTMAALPVILAGWLAQNKLVRGLSFGAIK-
                                    :          . : **:.:. :*::      .. :: .:   .:*