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M. smegmatis MC2 155 MSMEG_4130 (-)

AVYIGLNVEYFLLDHPSTSIWQGTADLRPDALNHGWREYGARVGIWRTIESLDRHGVRPSVLLNSVVVDE
YPQIVAAGVQRDWVWLAHGQTNSILHTGLSVDDERRVLAEITDTITEATGRRPRGWMGPGLTETHHTPEL
LAELGFQYVLDWTNDDQPYPLSVPGILSVPYTVELNDLLIFSKGITGPEFVQMVRDQYEQLHADSATSGR
VLALALHPFVIGQPFRHKYLDQALSFLTAQPDVWLTTSDDIATHYQTQTAIDQSPAGRPSMSAPRTEKPF
PV*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_4130	-	-	100% (283)	polysaccharide deacetylase family protein
M. smegmatis MC2 155	MSMEG_3412	-	e-142	90.80% (261)	polysaccharide deacetylase family protein
M. smegmatis MC2 155	MSMEG_5728	-	6e-22	31.72% (227)	polysaccharide deacetylase family protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_0796	-	9e-17	27.82% (248)	polysaccharide deacetylase
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	MAB_2935c	-	5e-21	29.69% (229)	polysaccharide deacetylase family protein
M. marinum M	MMAR_1211	-	4e-21	31.11% (225)	chitinase
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	MUL_2681	-	3e-21	31.11% (225)	chitinase
M. vanbaalenii PYR-1	Mvan_3154	-	3e-31	31.15% (260)	polysaccharide deacetylase

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1211|M.marinum_M               MTG----------YPRDMTGYGRTPPDPQWPGGALIAVQFVLNYEEGAES
MUL_2681|M.ulcerans_Agy99           MTG----------YPRDMTGYGRTPPDPQWRGGALIAVQFVLNYEEGAES
MAB_2935c|M.abscessus_ATCC_199      MAHNEAHDEAPPATPRDMVGYGRTPPHPRWPGNARIAVQFVLNYEEGAEN
MSMEG_4130|M.smegmatis_MC2_155      -----------------------------------MAVYIGLN----VEY
Mvan_3154|M.vanbaalenii_PYR-1       -----------MTERRAPAPFALSTQAPRLTP--PAAATVLVNVVVNLEH
Mflv_0796|M.gilvum_PYR-GCK          -----------------------------------MDAFRWPDGKTAAAA
                                                                         .    :       

MMAR_1211|M.marinum_M               SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MUL_2681|M.ulcerans_Agy99           SVLDGDSGSETFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQ
MAB_2935c|M.abscessus_ATCC_199      NVLDGSAGSETFLSEMVPVEAFPNRHMSMESLYEYGSRAGLWRVLRVFER
MSMEG_4130|M.smegmatis_MC2_155      FLLDHPSTSIWQGTADLRPDALN------HGWREYGARVGIWRTIESLDR
Mvan_3154|M.vanbaalenii_PYR-1       WTLDQPMPRAALPAPHGVSVVPDVAN---HSWVLYGLRSGLPRLAEALAP
Mflv_0796|M.gilvum_PYR-GCK          FTFDVDAESAVLWGDESVGARMS-----VMSHQAYGPLVGIPRILDLLEQ
                                      :*                          .   **   *: *       

MMAR_1211|M.marinum_M               SGVPLTIFAVAQAMQRNPEVAKVFRELGHEIACHGLR-WKSYQEIDRDTE
MUL_2681|M.ulcerans_Agy99           SGVPLTIFAVAQAMQRNPEVAKGFRELGHEIACHGLR-WKSYQEIDRDTE
MAB_2935c|M.abscessus_ATCC_199      RGLPLTIFAVATALQRNPEAVSAFGELGHEIACHGLR-WQSYQLVPPDIE
MSMEG_4130|M.smegmatis_MC2_155      HGVRPSVLLNSVVVDEYPQIVAAGVQRDWVWLAHGQTNSILHTGLSVDDE
Mvan_3154|M.vanbaalenii_PYR-1       LGSAVTVALNADVIDHYPQVADLIDERGWEVVAHGVR---QRSIQSYDEE
Mflv_0796|M.gilvum_PYR-GCK          HQITSTFFVPGHTADRYPEAVRSIVGAGHEIAHHGYL-HEQPTALTLEEE
                                         :.   . . :. *: .      .     **            : *

MMAR_1211|M.marinum_M               RAHLSEAVRIHHELTGSA--PRGWYGG--RDSPHTRELVVEHGGFLYDSD
MUL_2681|M.ulcerans_Agy99           RAHLSEAVRIHHELTGSA--PRGWYGG--RDSPHTRELVVEHGGFLYDSD
MAB_2935c|M.abscessus_ATCC_199      REHMAQAVQILRDLTGQA--PLGWYTG--RDSPQTRQLVVEHGGFSYDSD
MSMEG_4130|M.smegmatis_MC2_155      RRVLAEITDTITEATGRR--PRGWMGPGLTETHHTPELLAELG-FQYVLD
Mvan_3154|M.vanbaalenii_PYR-1       EPVVAEAVSRIRQRFGAGGWPRGWLSPGMNQTDESLRIMREHG-LEFNHD
Mflv_0796|M.gilvum_PYR-GCK          IDALDRGLAALADVAGVR--PAGYRAPMWDLSWRTPALLAERG-FLYDSS
                                       : .      :  *    * *:       : .:  :: * * : :  .

MMAR_1211|M.marinum_M               SYADDLPYWVRV----GASDHLVVPYTLDTNDMRFASPAGFSNGDEFFAH
MUL_2681|M.ulcerans_Agy99           SYADDLPYWVRV----GASDHLVVPYTLDTNDMRFASPAGFSNGDEFFAH
MAB_2935c|M.abscessus_ATCC_199      SYADDLPYWVRVPAPGGVADHLVVPYTLDTNDMRFSSPAGFPSGEQFFTH
MSMEG_4130|M.smegmatis_MC2_155      WTNDDQPYPLSVP------GILSVPYTVELNDLLIFSKG--ITGPEFVQM
Mvan_3154|M.vanbaalenii_PYR-1       WMIDDRPVWLTTP----AGPILGLPYTLTLNDVTTYQIGLQADGALADRT
Mflv_0796|M.gilvum_PYR-GCK          LMDADHPYELAVTPG-AAQSLVEIPIQWALDDWEQYCFLPDISGSGLIES
                                        * *  : .         : :*     :*           *      

MMAR_1211|M.marinum_M               LRDAFDVLYAEG--RAGSPKMLSVGLHCRLVGRPARTAALQRFLDHVRSH
MUL_2681|M.ulcerans_Agy99           LRDAFDVLYAEG--RAGSPKMLSVGLHCRLVGRPARTAALQRFLDHVRSH
MAB_2935c|M.abscessus_ATCC_199      LRDAFDCLYAEG--EAGSPKMLSVGLHCRLVGRPARTVALERFVDHVQAH
MSMEG_4130|M.smegmatis_MC2_155      VRDQYEQLHADS--ATSG-RVLALALHPFVIGQPFRHKYLDQALSFLTAQ
Mvan_3154|M.vanbaalenii_PYR-1       LR-SLERHRVEG--AVNP-VVMPIGLHPHIVGVAHRIGEIDEIVAAVVGA
Mflv_0796|M.gilvum_PYR-GCK          PRKARELWQLEFDALRRVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDH
                                     *   :    :            :  *  : * . *   : . :  :   

MMAR_1211|M.marinum_M               DRVWLARRVEIAEHWR---EVHPAPTG---------------
MUL_2681|M.ulcerans_Agy99           DRVWLARRVEIAEHWR---EVHPAPTG---------------
MAB_2935c|M.abscessus_ATCC_199      DGVWITKRIDIAEHWR---RVHPAGTEPNESSSPA-------
MSMEG_4130|M.smegmatis_MC2_155      PDVWLTTSDDIATHYQTQTAIDQSPAGRPSMSAPRTEKPFPV
Mvan_3154|M.vanbaalenii_PYR-1       PDVAAVTSSQIHDWFVG-----QVPAP---------------
Mflv_0796|M.gilvum_PYR-GCK          DDVWVVSQA---------------------------------
                                      *  .