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CGNGDSEQDQGEKVSGPQGSDPAQPWPGQQPEPGRDQPAGGEAWQPPTGGTEEPTTHNPAWQPPAYTQQP QPQYPQYQPPAQPGYGQPQQGYPSPEQFGQQPPYGQQPQYGQPGQYGQPSQPGQYGQPGQYPQPGQYGQQ PQYGQPGQYGQPGQPGQYGQPGQFGPYTPPGSADGSKKSLLLFGGLGAAALVLIVLAVLFFWVPGWAVTT ELDIDKAQTGVQQILTDETNGYGAKNVKDVKCNGGKNPVVKKGDTFTCEVSIDGTKRQVTVTFQNDDGTY EVGRPK*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3884 | - | - | 100% (287) | hypothetical protein MSMEG_3884 |
M. smegmatis MC2 155 | MSMEG_4894 | - | 2e-25 | 34.76% (210) | hypothetical protein MSMEG_4894 |
M. smegmatis MC2 155 | MSMEG_2420 | - | 3e-21 | 44.32% (176) | hypothetical protein MSMEG_2420 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2118c | - | 7e-75 | 55.32% (282) | hypothetical protein Mb2118c |
M. gilvum PYR-GCK | Mflv_3096 | - | 4e-90 | 64.06% (281) | hypothetical protein Mflv_3096 |
M. tuberculosis H37Rv | Rv2091c | - | 7e-75 | 55.32% (282) | hypothetical protein Rv2091c |
M. leprae Br4923 | MLBr_01334 | - | 4e-64 | 48.91% (276) | hypothetical protein MLBr_01334 |
M. abscessus ATCC 19977 | MAB_2190 | - | 4e-74 | 54.45% (281) | hypothetical protein MAB_2190 |
M. marinum M | MMAR_3077 | - | 2e-79 | 57.71% (279) | hypothetical protein MMAR_3077 |
M. avium 104 | MAV_2412 | - | 2e-75 | 59.58% (240) | hypothetical protein MAV_2412 |
M. thermoresistible (build 8) | TH_1424 | - | 3e-77 | 54.42% (283) | Probable membrane protein |
M. ulcerans Agy99 | MUL_2323 | - | 4e-79 | 57.35% (279) | hypothetical protein MUL_2323 |
M. vanbaalenii PYR-1 | Mvan_3439 | - | 1e-91 | 63.93% (280) | hypothetical protein Mvan_3439 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3096|M.gilvum_PYR-GCK --------------MSGP----QGSDPTQPWSG-----QQPEQGTDQ--- Mvan_3439|M.vanbaalenii_PYR-1 --------------MSGP----QGSDPTQPWPG-----QQPEQGTDQ--- TH_1424|M.thermoresistible__bu --------------MSGP----QGPDPTQPWSG-----Q-PAPGQDQ--- MSMEG_3884|M.smegmatis_MC2_155 MCGNGDSEQDQGEKVSGP----QGSDPAQPWPG-----QQPEPGRDQ--- Mb2118c|M.bovis_AF2122/97 --------------MSGP----QGSDPRQPW-------QPPGQGAD---- Rv2091c|M.tuberculosis_H37Rv --------------MSGP----QGSDPRQPW-------QPPGQGAD---- MMAR_3077|M.marinum_M --------------MSGP----QGPDPRQSW-------QPPGQGGD---- MUL_2323|M.ulcerans_Agy99 --------------MSGP----QGPDPRQSW-------QPPGQGGD---- MAV_2412|M.avium_104 -------------------------------------------------- MLBr_01334|M.leprae_Br4923 --------------MSEP----QGSDPGKQW-------QSPGEGVEN--- MAB_2190|M.abscessus_ATCC_1997 --------------MASLPLMAHKVEQTLRWSVSTLLHTGKKQGRDTGGT Mflv_3096|M.gilvum_PYR-GCK PAGD-AAANQG-WQPPS----------TEQPAWQPPAYQPQ---QYPQYQ Mvan_3439|M.vanbaalenii_PYR-1 PAGD-SAANQG-WQPPTPGAGQ----QPEQPSWQPPAYTPQ---QYPQYQ TH_1424|M.thermoresistible__bu PSGDPTAAGQNPWQPTASGSEQPQAGAEGQQQWQPPAYGQQ---PYPPYQ MSMEG_3884|M.smegmatis_MC2_155 PAGG------EAWQPPTGGTEEP---TTHNPAWQPPAYTQQPQPQYPQYQ Mb2118c|M.bovis_AF2122/97 HSSDPTVAAGYPWQQQ----------PTQEATWQAPAYTP-------QYQ Rv2091c|M.tuberculosis_H37Rv HSSDPTVAAGYPWQQQ----------PTQEATWQAPAYTP-------QYQ MMAR_3077|M.marinum_M HSSDPTMAAGSPWQQ-----------PGQEGSWQPPSYPAA---DYQQYQ MUL_2323|M.ulcerans_Agy99 HSSDPTMAAGSPWQQ-----------PGQEGSWQPPSYPAA---DYQQYQ MAV_2412|M.avium_104 ------MAP--TWQDH----------ATQEASWQAPAYTPPA--EYPQYQ MLBr_01334|M.leprae_Br4923 HSSDQPTQAASPWQQQP---------STQDSTWHPPAYASP---ECYNYP MAB_2190|M.abscessus_ATCC_1997 MSGPQGTEPGGQWAPQP---------GQGQDPWQTPQSSDP---AQQGEQ * : *:.* Mflv_3096|M.gilvum_PYR-GCK QPTQPPTYSPQQ-YPPGDQYGQP----QTGEYN-PAAYPPP----GQYGQ Mvan_3439|M.vanbaalenii_PYR-1 QPAQPPTYSPQQ-YP-ADQYGQ-----QPAEYS-PAGYPPP----GQYGQ TH_1424|M.thermoresistible__bu QPGQP-AYPPP----------------QPTEYN-PAAYGQP----GQPGQ MSMEG_3884|M.smegmatis_MC2_155 PPAQPGYGQPQQGYPSPEQFGQQPPYGQQPQYGQPGQYGQPS-QPGQYGQ Mb2118c|M.bovis_AF2122/97 QPADPAYPQQYPQ--------------PTPGYAQPEQFGA---QPTQLGV Rv2091c|M.tuberculosis_H37Rv QPADPAYPQQYPQ--------------PTPGYAQPEQFGA---QPTQLGV MMAR_3077|M.marinum_M QPVEPAYPQQYP---------------AAPGYGQSD-FGS---QPTQFGA MUL_2323|M.ulcerans_Agy99 QPVEPAYPQQYP---------------AAPGYGQSD-FGS---QPTRFGA MAV_2412|M.avium_104 QPGEQAYPQPYP---------------QQQGYAQPGQYGQYG-QPGQYGQ MLBr_01334|M.leprae_Br4923 QLTEPVYPHQYPS--------------ATPGYGQPGYFGA---QFSQCGI MAB_2190|M.abscessus_ATCC_1997 GWQQPAYGQGQQ----------------YPQYQQPGFPGGGFGDPSQFGQ : * . : * Mflv_3096|M.gilvum_PYR-GCK Q------PGYGQ---YGQQPQYGQ-PGQYGQ---QPG---QYGQYPGAP- Mvan_3439|M.vanbaalenii_PYR-1 P------GGYGQ---QYGQP-YGQ-PGQYGQ---QPGQAGQYGQYPGAPG TH_1424|M.thermoresistible__bu F------GQYGQPPGQFGAPPYGQQPGQFGQ---QPG---QYGQFPPYD- MSMEG_3884|M.smegmatis_MC2_155 P------GQYPQPGQYGQQPQYGQ-PGQYGQP-GQPG---QYGQPGQFG- Mb2118c|M.bovis_AF2122/97 P------GQYG----QYQQPGQYGQPGQYGQ----PG---QYAPPGQYPG Rv2091c|M.tuberculosis_H37Rv P------GQYG----QYQQPGQYGQPGQYGQ----PG---QYAPPGQYPG MMAR_3077|M.marinum_M PPQFGQPGQYGQP-GQYGQPGQYGQPGQPGQ----PG---QYGQPGQYPG MUL_2323|M.ulcerans_Agy99 PPQFGQPGQYGQP-GQYGQPGQYGQPGQPGQ----PG---QYGQPGQYPG MAV_2412|M.avium_104 P------GQYAQP-GQYPQPGQYPQPGQYPQ----PGQYGQYGQPGQYPQ MLBr_01334|M.leprae_Br4923 P-------------GQYPQSG---SPGQYGP----PG---QYGPPGQYSQ MAB_2190|M.abscessus_ATCC_1997 QPG----QGFGEP-SQFGQPGAYGQQGQYGQQGAYPG---QYGQPQGQPF . ** ** **. Mflv_3096|M.gilvum_PYR-GCK --GYPGQGGDEGSKRSMAVIGGVIGALVAVILAVVLVTGFWKPGFFVTTK Mvan_3439|M.vanbaalenii_PYR-1 APGYPAPGSEEGSKRSLAVIGGVVGVLAAVVIAAVLVLGFWKPGFFVTTK TH_1424|M.thermoresistible__bu --AARAEGSGPKSKMLLGVLGGVLG----LVVIAVLVLGLWKPGFLITTK MSMEG_3884|M.smegmatis_MC2_155 --PYTPPGSADGSKKSLLLFGGLGAA--ALVLIVLAVLFFWVPGWAVTTE Mb2118c|M.bovis_AF2122/97 -QYGPYGQSGQGSKRSVAVIGGVIAVMAVLFIGAVLILGFWAPGFFVTTK Rv2091c|M.tuberculosis_H37Rv -QYGPYGQSGQGSKRSVAVIGGVIAVMAVLFIGAVLILGFWAPGFFVTTK MMAR_3077|M.marinum_M -QFSPYDQSGQGSKRSMALIGGVVGGIALLFVVVILVLGFWVPGFFVTTK MUL_2323|M.ulcerans_Agy99 -QFSPYDQSGQGSKRSMALIGGVVGGIALLFVVVILVLGFWVPGFFVTTK MAV_2412|M.avium_104 -QYQPYEQPGK--KRPVGLIAGVAGGIALLLIAVVLVLGFWQPGFFVTTK MLBr_01334|M.leprae_Br4923 -QFQPYEQPGT--KGFVALIGSIAGVIGVLIFAAILVTGFLWPAWLVTTK MAB_2190|M.abscessus_ATCC_1997 --PQFGAGKPQRSTKTIAIIGGIVAA--AVVLIVLLVTAFLAPGWAVTTT . : ::..: . :.. .: : : *.: :** Mflv_3096|M.gilvum_PYR-GCK LDVDAAQTGVRQILTDETNGYGAKNVNDVTCNGGVSPTVKKGDTFTCEVS Mvan_3439|M.vanbaalenii_PYR-1 LDVNAAQNGVKQILTDETNGYGATNVNDVKCNNGVSPTVKKGDTFNCEVS TH_1424|M.thermoresistible__bu LDVNAAQTGVQQILTDETNGYGAKNVRDVVCNDGESPTVKKDTSFTCEVS MSMEG_3884|M.smegmatis_MC2_155 LDIDKAQTGVQQILTDETNGYGAKNVKDVKCNGGKNPVVKKGDTFTCEVS Mb2118c|M.bovis_AF2122/97 LDVIKAQAGVQQVLTDETTGYGAKNVKDVKCNNGSDPTVKKGATFECTVS Rv2091c|M.tuberculosis_H37Rv LDVIKAQAGVQQVLTDETTGYGAKNVKDVKCNNGSDPTVKKGATFECTVS MMAR_3077|M.marinum_M LDVSKANAGVQQVLTDETNGYGAKNVKDVKCNDGTDPTVKKGATFDCTVS MUL_2323|M.ulcerans_Agy99 LDVSKANAGVQQVLTDETNGYGAKNVKDVKCNDGTDPTVKKGATFDCTVS MAV_2412|M.avium_104 LDVNKAQAGVQQVLSDETNGYGAKNVKDVKCNHGQNPTVKKGATFDCDVS MLBr_01334|M.leprae_Br4923 LDVNKAQASVQQVLTDETNGYGAKNVKDVKCNNGADPTVKKGDTFDCSVS MAB_2190|M.abscessus_ATCC_1997 LDVNKAQDGVTKILTDETNGYGAKNVKDVKCNDGNNPEVKKGATFTCDVS **: *: .* ::*:***.****.**.** ** * .* ***. :* * ** Mflv_3096|M.gilvum_PYR-GCK IDGTKRQVTVTFQDDDGTYEVGRPR Mvan_3439|M.vanbaalenii_PYR-1 IDGTKRQVTVTFQDDNGTYEVGRPK TH_1424|M.thermoresistible__bu IDGTKRRVTVTFLDDDGTYQVGRPQ MSMEG_3884|M.smegmatis_MC2_155 IDGTKRQVTVTFQNDDGTYEVGRPK Mb2118c|M.bovis_AF2122/97 IDGTSKRVTVTFQDNKGTYEVGRPQ Rv2091c|M.tuberculosis_H37Rv IDGTSKRVTVTFQDNKGTYEVGRPQ MMAR_3077|M.marinum_M IDGASKHVTVTFQDNKGTYEVGRPQ MUL_2323|M.ulcerans_Agy99 IDGASKHVTVTFQDNKGTYEVGRPQ MAV_2412|M.avium_104 IDGAPKHVTVTFQDNKGTYEVGRPQ MLBr_01334|M.leprae_Br4923 IDGMQKRVTVTFQDDKGTYEVGRPQ MAB_2190|M.abscessus_ATCC_1997 IDGTKRQVTVTFQNDKGTYEVGRPK *** ::***** ::.***:****: