For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSAPEPVYILGAGMHPWGKWGRDFTEYGVVAARAALAEAGLDWRQIQLVAGADTIRNGYPGFVAGATFAQ KLGWNGVPVTSSYAACASGSQALQSARAQILAGFCDVALVVGADTTPKGFFAPVGGERKNDPDWQRFHLI GATNTVYFALLARRRMDLYGATLEDFAQVKVKNARHGLNNPNARYRKEASVEDVLASPVVSDPLRLLDIC ATSDGAAALVVASKSFVEKHLGSVEGVPSVRAISLQSPQYPQHLPELPDIATDSTAVVKAPERVFKDQIL DAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCEKGEAEQLLRSGATTIGGRIPVNASGGLACFGE AIPAQAIAQVCELTWQLKGQATGRQVEGAKVGITANQGLFGHGSSVIVAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3844 | - | - | 100% (400) | lipid-transfer protein |
M. smegmatis MC2 155 | MSMEG_4778 | - | 3e-50 | 33.42% (395) | putative thiolase |
M. smegmatis MC2 155 | MSMEG_2236 | - | 1e-46 | 32.67% (401) | putative thiolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1653c | - | 0.0 | 91.50% (400) | lipid-transfer protein |
M. gilvum PYR-GCK | Mflv_4527 | - | 0.0 | 91.46% (398) | lipid-transfer protein |
M. tuberculosis H37Rv | Rv1627c | - | 0.0 | 91.50% (400) | lipid-transfer protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2619 | - | 0.0 | 88.66% (397) | lipid-transfer protein |
M. marinum M | MMAR_2430 | - | 0.0 | 90.75% (400) | nonspecific lipid-transfer protein |
M. avium 104 | MAV_3157 | - | 0.0 | 90.68% (397) | lipid-transfer protein |
M. thermoresistible (build 8) | TH_2429 | - | 0.0 | 92.96% (398) | PUTATIVE lipid-transfer protein |
M. ulcerans Agy99 | MUL_2143 | ltp1 | 4e-51 | 33.41% (413) | lipid-transfer protein |
M. vanbaalenii PYR-1 | Mvan_2862 | - | 0.0 | 92.96% (398) | lipid-transfer protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4527|M.gilvum_PYR-GCK -----MSPEPVYILGAGMHPWGKWGR----DFTEYGVVAARAALADAGLN Mvan_2862|M.vanbaalenii_PYR-1 -----MSPEPVYILGAGMHPWGKWGR----DFTEYGVVAARAALAEAGLH MSMEG_3844|M.smegmatis_MC2_155 ----MSAPEPVYILGAGMHPWGKWGR----DFTEYGVVAARAALAEAGLD TH_2429|M.thermoresistible__bu -----MSPEPVYILGAGMHPWGKWGR----DFTEYGVAAARAALAEAGLD Mb1653c|M.bovis_AF2122/97 --MRMSAPEPVYILGAGMHPWGKWGN----DFTEYGVVAARAALRDAGVD Rv1627c|M.tuberculosis_H37Rv --MRMSAPEPVYILGAGMHPWGKWGN----DFTEYGVVAARAALRDAGVD MMAR_2430|M.marinum_M ----MSAPEPLYILGAGMHPWGKWGN----DFTEYGVAAARAALREAGLE MAV_3157|M.avium_104 MTTPSTPPEPLYILGAGMHPWGKWGN----DFTEYGVAAARAALAEAGLD MAB_2619|M.abscessus_ATCC_1997 ---MSRTPDPVYILGAGMHPWGKWGR----DFTEYGVAAARTALQDAELD MUL_2143|M.ulcerans_Agy99 --MPNNGSNRVFVIGVGMTKFEKPGRREGWDYPDMARESGTNALNDAGIE .: ::::*.** : * *. *:.: . :. ** :* :. Mflv_4527|M.gilvum_PYR-GCK WQQIQLVAGADTIRNGYPGFVAGATFAQKLGWNGIPVTSSYAACASGSQA Mvan_2862|M.vanbaalenii_PYR-1 WRQIQLVAGADTIRNGYPGFVAGATFAQKLGWNGIPITSSYAACASGSQA MSMEG_3844|M.smegmatis_MC2_155 WRQIQLVAGADTIRNGYPGFVAGATFAQKLGWNGVPVTSSYAACASGSQA TH_2429|M.thermoresistible__bu WRQIQFVAGADTIRNGYPGFVAGSTFAQKLGWNGVPVSSSYAACASGSQA Mb1653c|M.bovis_AF2122/97 WRHVQLVAGADTIRNGYPGFVAGATFAQKLGWTGVPVSSSYAACASGSQA Rv1627c|M.tuberculosis_H37Rv WRHVQLVAGADTIRNGYPGFVAGATFAQKLGWTGVPVSSSYAACASGSQA MMAR_2430|M.marinum_M WRQIQLVAGADTIRNGYPGFVAGATFAQKLGWNGVPVSSSYAACASGSQA MAV_3157|M.avium_104 WRQIQLVAGADTIRNGYPGFVAGATFAQKLGWNGVPVSSSYAACASGSQA MAB_2619|M.abscessus_ATCC_1997 WRQIQFVAGADTIRNGYPGFIAGSTFAQKLGWNGVPISSTYAACASGSQA MUL_2143|M.ulcerans_Agy99 YREVEHAY----VGYVYGESTSGQRAVYELGMTGIPVVNVNNNCSTGSTA ::.:: . : * :* . :** .*:*: . *::** * Mflv_4527|M.gilvum_PYR-GCK LQSARAHILAGLCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGA Mvan_2862|M.vanbaalenii_PYR-1 LQSARAQILAGLCDVALVIGADTTPKGFFAPVGGERRNDPDWQRFHLIGA MSMEG_3844|M.smegmatis_MC2_155 LQSARAQILAGFCDVALVVGADTTPKGFFAPVGGERKNDPDWQRFHLIGA TH_2429|M.thermoresistible__bu LQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGA Mb1653c|M.bovis_AF2122/97 LQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKGDPDWQRFHLIGA Rv1627c|M.tuberculosis_H37Rv LQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKGDPDWQRFHLIGA MMAR_2430|M.marinum_M LQSARAQILAGFCDVALVVGADTTPKGFFAPVGGERKNDPDWQRFHLIGA MAV_3157|M.avium_104 LQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGA MAB_2619|M.abscessus_ATCC_1997 LQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKADPDWQRFHLIGA MUL_2143|M.ulcerans_Agy99 LFLAAQAIRGGLADCTVALGFEKMKPGSLSSSYDDRTQPMDKHVKALAQI * * * .*:.* ::.:* :. * ::. .:* * : * Mflv_4527|M.gilvum_PYR-GCK TNTVY------FALLARRRMDLYGATTDDFATVKVKNARHGLANPNARYR Mvan_2862|M.vanbaalenii_PYR-1 TNTVY------FALLARRRMDLYGATVDDFAQVKVKNARHGLHNPNARYR MSMEG_3844|M.smegmatis_MC2_155 TNTVY------FALLARRRMDLYGATLEDFAQVKVKNARHGLNNPNARYR TH_2429|M.thermoresistible__bu TNTVY------FALLARRRMDLYGATAEDFAAVKVKNARHGLHNPYARYR Mb1653c|M.bovis_AF2122/97 TNTVY------FALLARRRMDLYGATVEDFAQVKVKNSRHGLDNPNARYR Rv1627c|M.tuberculosis_H37Rv TNTVY------FALLARRRMDLYGATVEDFAQVKVKNSRHGLDNPNARYR MMAR_2430|M.marinum_M TNPVY------FALLARRRMDLYGATLEDFAQVKVKNSRHGLQNPNARYR MAV_3157|M.avium_104 TNPVY------FALLARRRMDLYGATLEDFAQVKVKNSRHGLQNPNARYR MAB_2619|M.abscessus_ATCC_1997 TNPVY------FALLARRRMDLFGATVEDFAQVKVKNSRHGLNNPNARFR MUL_2143|M.ulcerans_Agy99 AEFAFPVAPWMFGAAGREHMQQYGSTAEHFAKIGFKNHKHSVNNPFAQFQ :: .: *. .*.:*: :*:* :.** : .** :*.: ** *::: Mflv_4527|M.gilvum_PYR-GCK KEATLDDVHASPVVSDPLRLLDICATSDGAAALIVASKAFTEKHLGSAAG Mvan_2862|M.vanbaalenii_PYR-1 KEATLDDVAASPVVSDPLRLLDICATSDGAAALIVASKAFTEKHLGSVNG MSMEG_3844|M.smegmatis_MC2_155 KEASVEDVLASPVVSDPLRLLDICATSDGAAALVVASKSFVEKHLGSVEG TH_2429|M.thermoresistible__bu KETSIEDVLASPVVSDPLRLLDICATSDGAAALIVASRSFAEKHLGSVQG Mb1653c|M.bovis_AF2122/97 KENSIDDVLASPVVSDPLRLLDICATSDGAAALIVASKSFTEKHLGSVAG Rv1627c|M.tuberculosis_H37Rv KENSIDDVLASPVVSDPLRLLDICATSDGAAALIVASKSFTEKHLGSVAG MMAR_2430|M.marinum_M KEVSVEDVLASQVVAEPLRLLDICATSDGAAALIVASAKFAREHLGSLDG MAV_3157|M.avium_104 KEVSVEDVLASAVVADPLRLLDICATSDGAAALVVASAKFAREHLGSLAG MAB_2619|M.abscessus_ATCC_1997 KESSVADVLASPVVSDPLRLLDICATSDGAAALIVASADFAKKHLGSVDG MUL_2143|M.ulcerans_Agy99 EAYTLDDILASRMIYEPLTKLRCSPTSDGSGAAILASESFVDSHG--LAG : :: *: ** :: :** * ..****:.* ::** *. .* * Mflv_4527|M.gilvum_PYR-GCK VPSVRAISLQSPQYPQHLPELPDIATDSTAVVPGPDRVFKDQILDAAYTE Mvan_2862|M.vanbaalenii_PYR-1 VPSVRAISLQSPQYPQHLPELPDIATDSTAVVPAPERVFKDQILDAAYTE MSMEG_3844|M.smegmatis_MC2_155 VPSVRAISLQSPQYPQHLPELPDIATDSTAVVKAPERVFKDQILDAAYAE TH_2429|M.thermoresistible__bu VPSVRAVSTVTPRYPQHLPELPDIATDSTAVVDAPERVFKDQILDAAYAE Mb1653c|M.bovis_AF2122/97 VPSVRAISTVTPKYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAE Rv1627c|M.tuberculosis_H37Rv VPSVRAISTVTPKYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAE MMAR_2430|M.marinum_M VPSVRAVSTVTPRYPQHLPELPDIATDSTAVVPAPERVFKDQILDAAYTE MAV_3157|M.avium_104 VPSVRAVSTVTPRYPQHLPELPDIATDSTAAVPAPDRVFKDQIIDAAYAE MAB_2619|M.abscessus_ATCC_1997 VPSVRAVATITPKYPQHLPELPDIATDSTAVVPAPERVFKDQIVDAAYAE MUL_2143|M.ulcerans_Agy99 RAVEIVGQAMTTDFASTFDGSAKNLIGYDMNVQAARRVYQ---------Q . . :. :.. : .. . * .. **:: : Mflv_4527|M.gilvum_PYR-GCK AGIAPQDLSLAEVYDLSTALELDWYEHLGLCAKGEAEHLLRSGATTIGGR Mvan_2862|M.vanbaalenii_PYR-1 AGIGPQDLSLAEVYDLSTALELDWYEHLGLCAKGEAEHLLRSGATTLGGT MSMEG_3844|M.smegmatis_MC2_155 AGIGPEDLSLAEVYDLSTALELDWYEHLGLCEKGEAEQLLRSGATTIGGR TH_2429|M.thermoresistible__bu AGIGPEDLSLAEVYDLSTALELDWYEHLGLCAKGEAEQLLRSGATALGGR Mb1653c|M.bovis_AF2122/97 AGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR Rv1627c|M.tuberculosis_H37Rv AGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR MMAR_2430|M.marinum_M AGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTIGGR MAV_3157|M.avium_104 AGVAPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR MAB_2619|M.abscessus_ATCC_1997 AGIGPEDISLAEVYDLSTALELDWYEHLGLCAKGEGEQLLRSGATTVGGR MUL_2143|M.ulcerans_Agy99 SGLGPEDFQVIELHDCFSANELLLYEALGLCGQGEAPKLIDNGDTTYGGR :*:.*:*:.: *::* :* ** ** **** :**. *: .* *: ** Mflv_4527|M.gilvum_PYR-GCK IPVNPSGGLASFGEAIPAQAIAQVCELTWQLKGQATGRQVENATVGITAN Mvan_2862|M.vanbaalenii_PYR-1 IPVNPSGGLASFGEAIPAQAIAQVCELTWQLKGQATGRQVEGATVGITAN MSMEG_3844|M.smegmatis_MC2_155 IPVNASGGLACFGEAIPAQAIAQVCELTWQLKGQATGRQVEGAKVGITAN TH_2429|M.thermoresistible__bu IPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVENAKVGITAN Mb1653c|M.bovis_AF2122/97 VPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVADAKVGVTAN Rv1627c|M.tuberculosis_H37Rv VPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVADAKVGVTAN MMAR_2430|M.marinum_M VPVNPSGGLACFGEAIPAQAIAQVCELNWQLRGQATGRQVENARVGVTAN MAV_3157|M.avium_104 VPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVENATVGITAN MAB_2619|M.abscessus_ATCC_1997 VPVNASGGLACFGEAIPAQAIAQVCELTWQLRGQAGDRQVEGARVGITAN MUL_2143|M.ulcerans_Agy99 WVVNPSGGLISKGHPLGATGLAQCCELTWQLRGTADRRQVDNVTAALQHN **.**** . *..: * .:** ***.***:* * *** .. ..: * Mflv_4527|M.gilvum_PYR-GCK QGLFGHGSSVILAR--- Mvan_2862|M.vanbaalenii_PYR-1 QGLFGHGSSVIVAR--- MSMEG_3844|M.smegmatis_MC2_155 QGLFGHGSSVIVAR--- TH_2429|M.thermoresistible__bu QGLFGHGSSVIVAR--- Mb1653c|M.bovis_AF2122/97 QGLFGHGSSVIVAR--- Rv1627c|M.tuberculosis_H37Rv QGLFGHGSSVIVAR--- MMAR_2430|M.marinum_M QGLFGHGSSVIVAR--- MAV_3157|M.avium_104 QGLFGHGSSVIVAR--- MAB_2619|M.abscessus_ATCC_1997 QGLFGNGSSVIVAR--- MUL_2143|M.ulcerans_Agy99 IGLGGAAVVTAYQRAER ** * . . *