For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDQPETFRRRIFSRSSWPEWQRVSELLRTETVGGALLLVAALAALVWANSPWSAGYDQVSDFVVGPHSL HLDLSISAWAADGLLAIFFFVVGVELKREFVVGDLRDPAKAALPIAAAVGGMIVPAVIFVGVNLVAGHTE NLGGWAIPVATDIAFALAVLAVIATHLPSALRIFLLTLAVVDDLLAIIVIAVFYTTQLSFGPLAGALVTI AVFGLAVQRGVRTPFLLLPLAVVAWALMHASGVHATVAGVLLGFTIPVLGRHACADRMEHRLRPLSAGFA VPVFAFFAAGVTVGGLSGFASALSHPVTYGVIAGLVLGKPIGVFLTTYVLARFTNASLDEDLAWRDVLGL ALLAGIGFTVSLLIGELAFENSPIAHDDAKIAVLTGSVLAGLLAAVVLLSRNAVYRRIHEAETVDADDDG VPDIYQPRQDQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2775 | nhaA | - | 100% (431) | Na+/H+ antiporter NhaA |
M. smegmatis MC2 155 | MSMEG_6769 | - | 1e-07 | 25.27% (277) | transporter, monovalent cation:proton antiporter-2 (CPA2) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3924 | nhaA | 1e-149 | 63.70% (438) | Na+/H+ antiporter NhaA |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2991c | - | 1e-154 | 65.58% (430) | Na+/H+ antiporter NhaA |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3766 | - | 1e-144 | 63.17% (429) | PUTATIVE Na+/H+ antiporter NhaA |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2476 | nhaA | 1e-148 | 63.16% (437) | Na+/H+ antiporter NhaA |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3924|M.gilvum_PYR-GCK ----------------MAATPLPPPR---RPVFSRGSWAETRRVTEILRK Mvan_2476|M.vanbaalenii_PYR-1 MCREDWSASIRRRPVRQAVTSDPRARRIRRALLARGSWSETNRVTEILRK TH_3766|M.thermoresistible__bu ----------------VIARPLRRPP---RRLLTRGSWAETSRITAILRR MAB_2991c|M.abscessus_ATCC_199 ----------------MRLS---------QRVFTRGSWAESSRVAEILRK MSMEG_2775|M.smegmatis_MC2_155 ----------------MTDQPETFR----RRIFSRSSWPEWQRVSELLRT : :::*.**.* *:: :** Mflv_3924|M.gilvum_PYR-GCK ETVGGVILLVAAAAALIWANSPWAEGYFALRDLELGGEWFGLHLNLTLGA Mvan_2476|M.vanbaalenii_PYR-1 ETVGGIILLVAAAAALIWANSPWSQSYFALRDFELGGEWLGLHLNLTLGA TH_3766|M.thermoresistible__bu ETVGGGVLLVVAAAALLWANSPWSAGYFGLRDATVGGEPLGLHLNLTVGT MAB_2991c|M.abscessus_ATCC_199 ETVGGVLLVVAAVAALLWANSPWSSWYYRLGAITVGPE--QLHLHLTLAG MSMEG_2775|M.smegmatis_MC2_155 ETVGGALLLVAALAALVWANSPWSAGYDQVSDFVVGPH--SLHLDLSISA ***** :*:*.* ***:******: * : :* . ***.*::. Mflv_3924|M.gilvum_PYR-GCK WAADGLLAIFFLVVGLELKREFVAGDLRDPSRAALPIAAAVGGMVVPALI Mvan_2476|M.vanbaalenii_PYR-1 WAADGLLAIFFLVVGLELKREFVAGDLRDPSRAALPIAAAVGGMVVPALI TH_3766|M.thermoresistible__bu WAADGLLAIFFLVVGLELKREFVAGDLRDPARAVLPIVAAVGGMVAPALI MAB_2991c|M.abscessus_ATCC_199 WATDGLLAIFFFVVGVELKREFVAGDLRDPGRAALPIVAAVGGMLVPAAI MSMEG_2775|M.smegmatis_MC2_155 WAADGLLAIFFFVVGVELKREFVVGDLRDPAKAALPIAAAVGGMIVPAVI **:********:***:*******.******.:*.***.******:.** * Mflv_3924|M.gilvum_PYR-GCK FVLVNLNTGD-GALRGWAIPTATDIAFAVAVLAVIGTHLPSALRTFLLTL Mvan_2476|M.vanbaalenii_PYR-1 FVLVNLNTGD-GALRGWAIPTATDIAFAVAVLAVISTHLPSALRTFLLTL TH_3766|M.thermoresistible__bu FVVVAAGGGE-GALRGWAIPTATDIAFAVAVLAVLSTHLPAALRTFLLTL MAB_2991c|M.abscessus_ATCC_199 YLAVNASGGG-AAMRGWAIPTATDIAFALAVLAVISTHLPTALRTFLLTL MSMEG_2775|M.smegmatis_MC2_155 FVGVNLVAGHTENLGGWAIPVATDIAFALAVLAVIATHLPSALRIFLLTL :: * * : *****.*******:*****:.****:*** ***** Mflv_3924|M.gilvum_PYR-GCK AVVDDLLAITVIAVFYTEDINGLALALAAVPLALFALCVQRGVQKWWVLV Mvan_2476|M.vanbaalenii_PYR-1 AVVDDLLAITVIAVFYTDDIKAWALALAVVPLALFTVCAQRGVQKWWLLV TH_3766|M.thermoresistible__bu AVVDDLLAVTVIAVFYTEEINTTALGLTLVPLAAFTVCVQRRIRAWWLLI MAB_2991c|M.abscessus_ATCC_199 AVVDDLLAVIVIAVFYTDELHWGPLGLALVPLGLFALAVQRRRREWWLLV MSMEG_2775|M.smegmatis_MC2_155 AVVDDLLAIIVIAVFYTTQLSFGPLAGALVTIAVFGLAVQRGVRTPFLLL ********: ******* :: .*. : *.:. * :..** : ::*: Mflv_3924|M.gilvum_PYR-GCK PLSVATWVLMHESGVHATVAGVLLGFAVPVRRQATPRGRGPAPSQRVGMA Mvan_2476|M.vanbaalenii_PYR-1 PLSVATWVLVHESGVHATVAGVLLGFAVPVHRSATRRGQQVDHAERVGMA TH_3766|M.thermoresistible__bu PLGVATWVLMHESGVHATVAGVLLGFAVPVRRSAAAGG----PAAGPGMA MAB_2991c|M.abscessus_ATCC_199 PLAVATWALVHASGVHATVAGVLLGFTVPVLR---RDG----RTDAHGMA MSMEG_2775|M.smegmatis_MC2_155 PLAVVAWALMHASGVHATVAGVLLGFTIPVLG-------------RHACA **.*.:*.*:* **************::** . * Mflv_3924|M.gilvum_PYR-GCK EYFEHRVRPVSAGIAIPVFAFFAAGVSIGGLDGFTRALSDPITLGIVLGL Mvan_2476|M.vanbaalenii_PYR-1 EYFEHRVRPISAGIAIPVFAFFAAGVSIGGLSGLSRALGDPITLGIVLGL TH_3766|M.thermoresistible__bu EHFEHRLRPLSAGLAVPVFAFFAAGVDFGGLSGLGDALRDPVTLGIIGGL MAB_2991c|M.abscessus_ATCC_199 EQFEHRLRPLSAGVAVPVFAFFAAGVTLGGFAGLGQALLDPVALGVVLGL MSMEG_2775|M.smegmatis_MC2_155 DRMEHRLRPLSAGFAVPVFAFFAAGVTVGGLSGFASALSHPVTYGVIAGL : :***:**:***.*:********** .**: *: ** .*:: *:: ** Mflv_3924|M.gilvum_PYR-GCK VLGKPIGIVLTTRVLSAVTRANLDASLRWVDVVGMSMLAGIGFTVSLLIG Mvan_2476|M.vanbaalenii_PYR-1 VAGKPIGILVTTRVLSAVTRASLDSSLRWVDVLGMSMLAGIGFTVSLLIG TH_3766|M.thermoresistible__bu VVGKPVGIWLTTRLLAAFTRARLDATLRWVDVFGVSLLAGIGFTVSLLIG MAB_2991c|M.abscessus_ATCC_199 LVGKPVGVFLTTYLLARFTRASLDDDLSWLDIAGVALLAGIGFTVSLLIG MSMEG_2775|M.smegmatis_MC2_155 VLGKPIGVFLTTYVLARFTNASLDEDLAWRDVLGLALLAGIGFTVSLLIG : ***:*: :** :*: .*.* ** * * *: *:::************* Mflv_3924|M.gilvum_PYR-GCK DLAY--------GLGSERDEFVKIGVLFGSLLAAGVAAVVLLTRNRAYRR Mvan_2476|M.vanbaalenii_PYR-1 DLAF--------GMGSERDEFVKIGVLSGSLLAASLAAIVLLTRNRAYRR TH_3766|M.thermoresistible__bu DLAY--------GTGSIRDDHVKVGVLLGSVTAAALAAAVLRMRNRYYRI MAB_2991c|M.abscessus_ATCC_199 ELAFGAAESATSGVGAETASHVKVGVLAGSLTSAAVASVVLRLRNRVYQR MSMEG_2775|M.smegmatis_MC2_155 ELAFE--------NSPIAHDDAKIAVLTGSVLAGLLAAVVLLSRNAVYRR :**: .. . .*:.** **: :. :*: ** ** *: Mflv_3924|M.gilvum_PYR-GCK IYREETVDEDRDGVPDVYQTRQDRT- Mvan_2476|M.vanbaalenii_PYR-1 IHREETADDDHDGVPDVYQTRQD--- TH_3766|M.thermoresistible__bu LHQQETEDADRDGVPDIYQSPNT--- MAB_2991c|M.abscessus_ATCC_199 IEAKETLDADHDGVPDVFGSAPGDRI MSMEG_2775|M.smegmatis_MC2_155 IHEAETVDADDDGVPDIYQPRQDQ-- : ** * * *****:: .