For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MALTAEEETIVKTVHDFVEKQVKPVVRELEHANTYPEELIETMKEIGIFGLAIPEPYGFGAVSMPCYVQV AEELARGWMSLAGAMGGHTVVSKLLLLFGTEEQKQKYLPRMATGELRATMALTEPGGGSDLQAMRTVARR DGDDYVINGSKTWISNARRSDLVALMCKTDPDAQPAHKGVSILLVEKVPGFDVSRDLPKLGYKGVESCEL NFTDARVPVSSLLGDDEGRGFAQMMKGLEVGRLQVAARATGVARAAFEDALRYSQERESFGKPIWQHQSV GNMLADMGTKLYAARSLLLSAAEKFDAGQRCDMEAGMAKLFASETAMQIALDAVRVHGGYGYSTEYDVER YFRDAPLMIVGEGTNEIQRNVIAKQLVARGGLDI
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1991 | - | - | 100% (384) | isovaleryl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_2208 | - | e-103 | 47.15% (386) | acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_0108 | - | 6e-74 | 40.05% (372) | acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0221c | fadE3 | 1e-161 | 73.44% (384) | acyl-CoA dehydrogenase FADE3 |
M. gilvum PYR-GCK | Mflv_0446 | - | 1e-165 | 74.02% (381) | butyryl-CoA dehydrogenase |
M. tuberculosis H37Rv | Rv0215c | fadE3 | 1e-144 | 71.88% (352) | acyl-CoA dehydrogenase FADE3 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 5e-59 | 34.75% (377) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_2081 | - | 7e-64 | 39.38% (353) | acyl CoA dehydrogenase |
M. marinum M | MMAR_0455 | fadE3_2 | 1e-161 | 72.44% (381) | acyl-CoA dehydrogenase FadE3_2 |
M. avium 104 | MAV_2590 | - | 1e-170 | 76.44% (382) | putative acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_3837 | - | 1e-160 | 72.97% (381) | PUTATIVE Butyryl-CoA dehydrogenase |
M. ulcerans Agy99 | MUL_4024 | fadE3 | 1e-161 | 72.18% (381) | acyl-CoA dehydrogenase FadE3 |
M. vanbaalenii PYR-1 | Mvan_0221 | - | 1e-162 | 74.02% (381) | butyryl-CoA dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0221c|M.bovis_AF2122/97 -----MRN-----ELNDDEAMLVATVRAFIDRDVKPTVREVEHANSYPEA Rv0215c|M.tuberculosis_H37Rv -----MRN-----ELNDDEAMLVATVRAFIDRDVKPTVREVEHANSYPEA MMAR_0455|M.marinum_M -----MDNQRADSQLDEDEAMLVATVRAFIDRDVKPSVREVEHANTYPQA MUL_4024|M.ulcerans_Agy99 ----MMNNDSPDSQLDEDEAMLVATVRAFIDRDVRPSVREVEHANTYPQA TH_3837|M.thermoresistible__bu ------VN----VVLNDEETMLVETVRAFIDRDVKPTVREVEHANEYPQA Mflv_0446|M.gilvum_PYR-GCK -----MVDG-----LSSEEAMLVQTVRAFIDRDVKPTVRDVEHANTYPEA Mvan_0221|M.vanbaalenii_PYR-1 -----MVEG-----LSSEEAMLVETVRTFIDREVRPTVRDVEHANTYPEA MAV_2590|M.avium_104 -----MTVA-----LSDEETMLVETVRAFVDRDVKPTVRAVEHANEYPEA MSMEG_1991|M.smegmatis_MC2_155 ------------MALTAEEETIVKTVHDFVEKQVKPVVRELEHANTYPEE MAB_2081|M.abscessus_ATCC_1997 ------MSSPISPWMNAELLELRDLAAKFFSAELAPHANRFADQHHVDRE MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE : : : : . :: * . . . . Mb0221c|M.bovis_AF2122/97 WIEQMKHIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGH Rv0215c|M.tuberculosis_H37Rv WIEQMKHIGIYGLAIDEQYGGSPVSMPCYVQVTQELARGWMSLAGAMGGH MMAR_0455|M.marinum_M WIEQMKRIGIYGLAIGEAYGGSPVSMPCYVQVTQELARGWMSLAGAMGGH MUL_4024|M.ulcerans_Agy99 WIEQMKRIGIYGLAIGEAYGGSPVSMPCYVQVTQELARGWMSLAGAMGGH TH_3837|M.thermoresistible__bu WIEQMKRIGIYGLAIPESYGGSPVSMPCYVEVTQELSRGWMSLAGAMGGH Mflv_0446|M.gilvum_PYR-GCK WIDQMKQIGIYGLAVPESYGGTPVSTRCYVLVTQELARGWMSLAGAMGGH Mvan_0221|M.vanbaalenii_PYR-1 WIEKMKQIGIFGLAIPESEGGAPVSTRCYVLVTQELARGWMSLAGAMGGH MAV_2590|M.avium_104 WIEQMKRIGIFGLAVPEEYGGSPVSMPCYVKVTEELARGWMSLAGAMGGH MSMEG_1991|M.smegmatis_MC2_155 LIETMKEIGIFGLAIPEPYGFGAVSMPCYVQVAEELARGWMSLAGAMGGH MAB_2081|M.abscessus_ATCC_1997 LWNRAGELGLLCMSIPEEYGGGGGTFAHEAVVLEEQARIGDSSWGAGLHS MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN *: : : * * * :* :* * Mb0221c|M.bovis_AF2122/97 TVVAKLLTLFGTEEQRRTYLPPMASGELRATMALTEPGGGSDLQNMSTTA Rv0215c|M.tuberculosis_H37Rv TVVAKLLTLFGTEEQRRTYLPPMASGELRATMALTEPGGGSDLQNMSTTA MMAR_0455|M.marinum_M TVVAKLLMLFGTDEQKSTYLPAMATGELRATMALTEPGGGSDLQNMSTTA MUL_4024|M.ulcerans_Agy99 TVVAKLLMLFGTDEQKSTYLPAMATGELRATMALTEPGGGSDLQNMSTTA TH_3837|M.thermoresistible__bu TVVAKLLTLFGTEEQKQRYLPAMATGEIRATMALTEPGGGSDLQNMTTTA Mflv_0446|M.gilvum_PYR-GCK TVVAKLLTLFGTEEQKQRYLPAMATGEIRATMALTEPGGGSDLQAMGTVA Mvan_0221|M.vanbaalenii_PYR-1 TVVAKLLSLFGTDEQKQRYLPPMATGELRATMALTEPGGGSDLQAMSTVA MAV_2590|M.avium_104 TVVAKLISLYGTEEQKQKYLPRMASGEMRATMALTEPGGGSDLQAMTTTA MSMEG_1991|M.smegmatis_MC2_155 TVVSKLLLLFGTEEQKQKYLPRMATGELRATMALTEPGGGSDLQAMRTVA MAB_2081|M.abscessus_ATCC_1997 GIVAHYILQYATEELRAQWLPKMASGEMIGAIAMTEPGTGSDLQSVKTKA MLBr_00737|M.leprae_Br4923 KLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRA : : : .::* : ** :*: .: *::* *** : * * Mb0221c|M.bovis_AF2122/97 LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVL Rv0215c|M.tuberculosis_H37Rv LADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQGMSIVL MMAR_0455|M.marinum_M MADGPDQ---LLITGAKTWISNARRSGLIALLCKTDPHATPRHHGISIVL MUL_4024|M.ulcerans_Agy99 MADGPDQ---LLITGAKTWISNARRSGLIALLCKTDPHATPRHHGISIVL TH_3837|M.thermoresistible__bu LP-GPGG--GLVINGAKTWISNARRSGLIALLCKTDPDATPRHRGISVVL Mflv_0446|M.gilvum_PYR-GCK RRDGDD----LVLSGTKTWISNARRSGLIALLCKTDPDATPKHSGISVVL Mvan_0221|M.vanbaalenii_PYR-1 RRDGDE----LVISGAKTWISNARRSGLIALLCKTDPEATPRHSGISVVL MAV_2590|M.avium_104 RAEGNE----LVINGAKTWISNARRSGLIALLCKTDPQAQPRHKGISIVL MSMEG_1991|M.smegmatis_MC2_155 RRDGDD----YVINGSKTWISNARRSDLVALMCKTDPDAQPAHKGVSILL MAB_2081|M.abscessus_ATCC_1997 LLDGDE----YVITGSKTFITNGQQADLIIVVAKTDPSQG--AAGISLIV MLBr_00737|M.leprae_Br4923 KADGDD----WILNGFKCWITNGGKSTWYTVMAVTDPDKG--ANGISAFI * ::.* * :*:*. :: ::. *** *:* .: Mb0221c|M.bovis_AF2122/97 VEPGP-GLTVSRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQ Rv0215c|M.tuberculosis_H37Rv VEPGP-GLTVSRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQ MMAR_0455|M.marinum_M VEPGP-GLNISADLPKLGYKGVEACELSFDNYRAPTSAILGGQPGQGFSQ MUL_4024|M.ulcerans_Agy99 VEPGP-GLNISADLPKLGYKGVEACELSFDNYRAPTSAILGGQPGQGFSQ TH_3837|M.thermoresistible__bu VEQGTTGLSVSRDLPKLGYKGVESCELVFDDCRVPASAILGGEPGKGFTQ Mflv_0446|M.gilvum_PYR-GCK VDNPTPGLTVSRDLPKLGYKGVESCELAFDACRVPASAILGGTPGKGFSQ Mvan_0221|M.vanbaalenii_PYR-1 VDNPTDGLTVSRDLPKLGYKGVESCELTFDGCRVPESAILGGAAGRGFAQ MAV_2590|M.avium_104 VEHGQ-GLTVSRDLPKLGYKGVESCELSFDECRVPAAAILGDEPGRGFAQ MSMEG_1991|M.smegmatis_MC2_155 VEKVP-GFDVSRDLPKLGYKGVESCELNFTDARVPVSSLLGDDEGRGFAQ MAB_2081|M.abscessus_ATCC_1997 VEADRAGFRRGKVLDKIGQRGQDTSELFFDEVRVPRSHLLGQAEGQGFIQ MLBr_00737|M.leprae_Br4923 VHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIG-EPGTGFKT *. *: . *:* :* : ** * * * ::* * ** Mb0221c|M.bovis_AF2122/97 MMKGLETGRIQVAARALGVATAALEDSLAYAQQRESFGRPIWQHQAVGNY Rv0215c|M.tuberculosis_H37Rv MMKGLETGRIQVAARALGVATAALEDSLAYAQQRESFGRPIWQHQAVGNY MMAR_0455|M.marinum_M MMKGLETGRIQVAARALGVASAALDDALAYAQQRHSFGQPIWKHQAIGNY MUL_4024|M.ulcerans_Agy99 MMKGLETGRIQVAARALGVASAALDDALAYAQQRHSFGQPIWKHQAIGNY TH_3837|M.thermoresistible__bu MMKGLETGRIQVAARALGVATAALEDALAYAQQRESFGQPIWKHQAIGHY Mflv_0446|M.gilvum_PYR-GCK MMKGLETGRIQVASRALGVASAALEDALAYAQDRESFGRPIWKHQAVGHY Mvan_0221|M.vanbaalenii_PYR-1 MMKGLETGRIQVASRALGVASAALADALAYAQDRESFGQPIWKHQAVGHY MAV_2590|M.avium_104 MMKGLETGRIQVASRALGVASAALEDALKYAQERESFGQPIWKHQSVGNY MSMEG_1991|M.smegmatis_MC2_155 MMKGLEVGRLQVAARATGVARAAFEDALRYSQERESFGKPIWQHQSVGNM MAB_2081|M.abscessus_ATCC_1997 LMTQLPQERLIVAVGAVAAMELALEQTLKYTREREAFGRPVFGFQNTKFT MLBr_00737|M.leprae_Br4923 ALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFM : * * :. * . *: :: *:::*. **..: .* Mb0221c|M.bovis_AF2122/97 LADMATKLTAARQLTRYAAERYDSGQR-CDMEAGMAKLFASEVAMEIALN Rv0215c|M.tuberculosis_H37Rv LADMATKLTAARQLTRYAAERYDSGQR-CDMEAGMAKLFASEVAMEIALN MMAR_0455|M.marinum_M LADMATKLTAARQLTHYAAQRYDSGQR-CDMEAGMAKLFASETAMEIALN MUL_4024|M.ulcerans_Agy99 LADMATKLTAARQLTHYAAQRYDSGQR-CDMEAGMAKLFASETAMEIALN TH_3837|M.thermoresistible__bu LADMATKLTAARQLTRYAAERYDSGQR-CDMEAGMAKLFASEVAMEIALN Mflv_0446|M.gilvum_PYR-GCK LADMATKLTAARQLTLYAADRYDSGER-ADMEAGMAKLFASEVAMEIALN Mvan_0221|M.vanbaalenii_PYR-1 LADMATKLTAARQLTLYAADRYDSGAR-ADMEAGMAKLFASEVAMEIALN MAV_2590|M.avium_104 LADMATKLTAARQLTRYAAEKYDSGER-CDMEAGMAKLFASEVAMEIALN MSMEG_1991|M.smegmatis_MC2_155 LADMGTKLYAARSLLLSAAEKFDAGQR-CDMEAGMAKLFASETAMQIALD MAB_2081|M.abscessus_ATCC_1997 LAEAATETRIARVFLDYCIDLHLAGQL-DVQTVAMAKWWTTERAMKVLDD MLBr_00737|M.leprae_Br4923 LADMAMKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEVTTD **: . : ** : . * . :* :::: **:: : Mb0221c|M.bovis_AF2122/97 AVRIHGGYGYSTEYDVERYFRDAPLMILGEGTNEIQRNVIAGQLVARGGI Rv0215c|M.tuberculosis_H37Rv AVRIHGGYGYSTEYDVERR------------------------------- MMAR_0455|M.marinum_M AVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLIARGGI MUL_4024|M.ulcerans_Agy99 AVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIARQLIARGGI TH_3837|M.thermoresistible__bu AVRIHGGYGYSTEFDVERYFRDAPLMIVGEGTNEIQRNVIVSQLVARNTV Mflv_0446|M.gilvum_PYR-GCK AVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAGQLVARGGI Mvan_0221|M.vanbaalenii_PYR-1 AVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAGQLVARGGI MAV_2590|M.avium_104 AVRIHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAAQLVSRGKL MSMEG_1991|M.smegmatis_MC2_155 AVRVHGGYGYSTEYDVERYFRDAPLMIVGEGTNEIQRNVIAKQLVARGGL MAB_2081|M.abscessus_ATCC_1997 CMQLHGGYGYMTEYPISRLWVDQRVQKIYAGTNEVMKEIISRSL------ MLBr_00737|M.leprae_Br4923 AVQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR---- .:::.** ** ::: :.* Mb0221c|M.bovis_AF2122/97 -- Rv0215c|M.tuberculosis_H37Rv -- MMAR_0455|M.marinum_M -- MUL_4024|M.ulcerans_Agy99 -- TH_3837|M.thermoresistible__bu -- Mflv_0446|M.gilvum_PYR-GCK -- Mvan_0221|M.vanbaalenii_PYR-1 -- MAV_2590|M.avium_104 -- MSMEG_1991|M.smegmatis_MC2_155 DI MAB_2081|M.abscessus_ATCC_1997 -- MLBr_00737|M.leprae_Br4923 --