For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PTISVAKRSSPHSGSHAPQRAHFTTEQINTATAVVTVHGDLDASNAGLLTDYALKALTRNAKLVLDLSDV AFFGAACFTALHTLNVRCAGADAEWVVVPSKAVTRVLRICDPDSGLTTAPDVVSALSRKSDQRPLQLVEN T*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1786 | - | - | 100% (142) | STAS domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_0586 | - | 3e-07 | 30.91% (110) | STAS domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0529c | - | 3e-07 | 32.43% (74) | hypothetical protein Mb0529c |
| M. gilvum PYR-GCK | Mflv_4788 | - | 5e-26 | 50.00% (114) | anti-sigma-factor antagonist |
| M. tuberculosis H37Rv | Rv0516c | - | 3e-07 | 32.43% (74) | hypothetical protein Rv0516c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3465 | - | 2e-13 | 35.40% (113) | putative sulfate transporter/antisigma-factor |
| M. marinum M | MMAR_0853 | - | 4e-07 | 32.43% (74) | hypothetical protein MMAR_0853 |
| M. avium 104 | MAV_4257 | - | 4e-19 | 41.60% (125) | STAS domain-containing protein |
| M. thermoresistible (build 8) | TH_2508 | - | 4e-24 | 49.17% (120) | PUTATIVE putative anti-sigma-factor antagonist |
| M. ulcerans Agy99 | MUL_0605 | - | 3e-07 | 32.43% (74) | hypothetical protein MUL_0605 |
| M. vanbaalenii PYR-1 | Mvan_1661 | - | 4e-24 | 46.56% (131) | anti-sigma-factor antagonist |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4788|M.gilvum_PYR-GCK ----MPHVPGP---PTPPVPDSLICHTARFDTTWTDPATAIVAGKGEVDA
Mvan_1661|M.vanbaalenii_PYR-1 ----MPHVPDQHPAPPAPVSDNVVCHTARFETRWPQPDTAIVSGLGELDA
MSMEG_1786|M.smegmatis_MC2_155 ----MPTISVAK--RSSPHSGSHAPQRAHFTTEQINTATAVVTVHGDLDA
TH_2508|M.thermoresistible__bu -----MILPVPR--PSPGGGEAVTCHAADFATRWVNSATVVIRVDGELDA
MAV_4257|M.avium_104 ---------------MSVAQSWQQSRTAQFTARWGLTGT-LITVDGELDA
Mb0529c|M.bovis_AF2122/97 MTTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLAT-VVTIRGEIDA
Rv0516c|M.tuberculosis_H37Rv MTTTIPTSKSACSVTTRPGNAAVDYGGAQIRAYLHHLAT-VVTIRGEIDA
MMAR_0853|M.marinum_M ----MGIAITASSFADRQKNGTFECSGAVVRAHCRHLAT-IVTIRGEIDA
MUL_0605|M.ulcerans_Agy99 ----MGIAITASSFADRQKNGTFECSGAVVRAHCRHLAT-IVTIRGEIDA
MAB_3465|M.abscessus_ATCC_1997 -------MESDPRRGISFSLVPYASSTGRFTTQWHRDQVVAIAACGDLDA
. . : . : *::**
Mflv_4788|M.gilvum_PYR-GCK ANGIRFVDYALRHADQTQWLVIDLSGLSFFSTAGFSALHTLNVQCVGEDI
Mvan_1661|M.vanbaalenii_PYR-1 ANGIDFVGYALRHSDRAHWLVVDLSGLTFFSTAGFSALHTLNVQCVSEDI
MSMEG_1786|M.smegmatis_MC2_155 SNAGLLTDYALKALTRNAKLVLDLSDVAFFGAACFTALHTLNVRCAGADA
TH_2508|M.thermoresistible__bu ANSPQLVDYALRHAGRIKYLVADLTGVEFFGIAGFSAAHDINGRCAHAKL
MAV_4257|M.avium_104 ANADQLAAYVQQSVNRSRRVILDLRGLNFIGTAGFSALHRINVICSAAQT
Mb0529c|M.bovis_AF2122/97 ANVEQISEHVRRFSLGTNPMVLDLSELSHFSGAGISLLCILDEDCRAAGV
Rv0516c|M.tuberculosis_H37Rv ANVEQISEHVRRFSLGTNPMVLDLSELSHFSGAGISLLCILDEDCRAAGV
MMAR_0853|M.marinum_M VNVDQVTERIQHFIHGTNPVVLDVGDVSHFSPAGISLLAAIDEECHAAGA
MUL_0605|M.ulcerans_Agy99 VNVDQVTERIQHFIHGTNPVVLDVGDVSHFSPAGISLLAAIDEECHAAGA
MAB_3465|M.abscessus_ATCC_1997 TNAGCFVEYALRHIDEKHALVLDLRKLEFLGTEGFLALKTVWSYAHQRAI
* . : :: *: : .:. : : .
Mflv_4788|M.gilvum_PYR-GCK RWALVPGTAVHRVLR----ICDPDSALPICPDVPSALVAV-----QEDPP
Mvan_1661|M.vanbaalenii_PYR-1 RWALVPSKAVDRLLR----ICDPDHALPTCADVPTALTVV-----QQEPP
MSMEG_1786|M.smegmatis_MC2_155 EWVVVPSKAVTRVLR----ICDPDSGLTTAPDVVSALSRK-----SDQ--
TH_2508|M.thermoresistible__bu TWTLVPSPAVVRLLQ----ICDPDGTLPLNTTVPDSVWDN-----GGSG-
MAV_4257|M.avium_104 SWAMAPSPAVARLLR----LCDPDGTLPVTTPKAEPLLEPRRANGDESPG
Mb0529c|M.bovis_AF2122/97 QWALVASPAVVEQLGGRCDQGEHESMFPMARSVHKALHDLADAI-DRRRQ
Rv0516c|M.tuberculosis_H37Rv QWALVASPAVVEQLGGRCDQGEHESMFPMARSVHKALHDLADAI-DRRRQ
MMAR_0853|M.marinum_M EWTLVAGPAVVELLG-----EDMATMFPVAHSVHEALRNLAEAN-SSRRQ
MUL_0605|M.ulcerans_Agy99 EWTLVAGPAVVELLG-----EDMATMFPVAHSVHEALRNLAEAN-SSRRQ
MAB_3465|M.abscessus_ATCC_1997 DCTVLPSAAVDRLLE----IGDPECTVSTADSLREVLNRLALPPTSNSDN
.: .. ** . * : .. :
Mflv_4788|M.gilvum_PYR-GCK RSFELITKTR--
Mvan_1661|M.vanbaalenii_PYR-1 RSLQLVAESR--
MSMEG_1786|M.smegmatis_MC2_155 RPLQLVENT---
TH_2508|M.thermoresistible__bu GLFQLIPEAG--
MAV_4257|M.avium_104 PLLQLVTKPR--
Mb0529c|M.bovis_AF2122/97 LVLPLISRSA--
Rv0516c|M.tuberculosis_H37Rv LVLPLISRSA--
MMAR_0853|M.marinum_M LMLSLVRKTA--
MUL_0605|M.ulcerans_Agy99 LMLSLVRKTA--
MAB_3465|M.abscessus_ATCC_1997 YESAMGPPRLAG
: