For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_1738 (-)

annotation: transmembrane protein
coordinates: 1831699 - 1832286
length: 195

PVTSRRRWWVLRALGKNPLVRRTDRIEALAVVLAIVVSVLVIPYVISFGDEVHADQLREATVQAQTRHQV
DATVVNDSQSNVEGANVRIVGIKWNVNGEERTGALRPTGKVQPGDKVQIWVDAKGQRVPPPISPTTARAY
ATGSAVALWAAITVLCGLLAALTRKVLDHQRAHAWSDELHLLLDHGDGRTKWPG*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1738--100% (195)transmembrane protein
M. smegmatis MC2 155MSMEG_6676-4e-2637.57% (189) transmembrane protein
M. smegmatis MC2 155MSMEG_1127-6e-2637.71% (175) transmembrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1762c-5e-3039.23% (181) transmembrane protein
M. gilvum PYR-GCKMflv_4998-1e-2134.08% (179) putative transmembrane protein
M. tuberculosis H37RvRv1733c-5e-2938.67% (181) transmembrane protein
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum MMMAR_3501-3e-2634.95% (186) hypothetical protein MMAR_3501
M. avium 104MAV_1986-1e-2437.79% (172) transmembrane protein
M. thermoresistible (build 8)TH_3263-8e-0537.74% (53) PUTATIVE -
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_1379-3e-2236.36% (187) putative transmembrane protein

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3501|M.marinum_M               ----------------------METFKLDP-RDWWIARIAGRNPLLRRAD
MAV_1986|M.avium_104                MTTKGRDHQRLTGGRGGDAAAELETVHIPL-PRILLAHLFGRNPLVRVSD
Mb1762c|M.bovis_AF2122/97           MIATTRDRE----------GATMITFRLRL-PCRTILRVFSRNPLVRGTD
Rv1733c|M.tuberculosis_H37Rv        MIATTRDRE----------GATMITFRLRL-PCRTILRVFSRNPLVRGTD
MSMEG_1738|M.smegmatis_MC2_155      ------------------------MPVTSR-RRWWVLRALGKNPLVRRTD
Mflv_4998|M.gilvum_PYR-GCK          ----------------------MQTFTLG--FGVWLRRLASRSPLVRSTD
Mvan_1379|M.vanbaalenii_PYR-1       ----------------------MQSNTFG--TRVWMRRLVARSPIVRGTD
TH_3263|M.thermoresistible__bu      ----------------------VTGFVIRPPRPPVLTRLYGRNPLLRPID
                                                                       : :  .:.*::*  *

MMAR_3501|M.marinum_M               RVEALVVLIALAASLVAIPVAAVLGAVVFNARADQYAEQAQVRHPVTAEV
MAV_1986|M.avium_104                RVQALIFVLAVAVSLAAVPVAATIGTAVHESRSRVYAEQSQTWRTVTATA
Mb1762c|M.bovis_AF2122/97           RLEAVVMLLAVTVSLLTIPFAAAAGTAVHDSRSHVYAHQAQTRHPATATV
Rv1733c|M.tuberculosis_H37Rv        RLEAVVMLLAVTVSLLTIPFAAAAGTAVQDSRSHVYAHQAQTRHPATATV
MSMEG_1738|M.smegmatis_MC2_155      RIEALAVVLAIVVSVLVIPYVISFGDEVHADQLREATVQAQTRHQVDATV
Mflv_4998|M.gilvum_PYR-GCK          RVEAAVMTLIVVAGVCAVPIAGAVGTAEYDRLTNSLAAERLTHREVDATV
Mvan_1379|M.vanbaalenii_PYR-1       RIEAAGLLLVVALSILTVPIAGAVGTAEYDRLAHTFAEQRLVKHEVDATA
TH_3263|M.thermoresistible__bu      RVEATIMTLTVVLSVIGLPFALAVTSEQVR--------------------
                                    *::*  . : :. .:  :* .                             

MMAR_3501|M.marinum_M               T-------GTT---RNPNTEAVVVQVRWPGAAAQHSGSLQRTSPVKAGQR
MAV_1986|M.avium_104                V-------GDSHPRRDLDSPTVRVPARWQYAGAEHAGDVIAPLNVKAGDR
Mb1762c|M.bovis_AF2122/97           IDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDR
Rv1733c|M.tuberculosis_H37Rv        IDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDR
MSMEG_1738|M.smegmatis_MC2_155      V--------NDSQSNVEGANVRIVGIKWNVNGEERTGALRPTGKVQPGDK
Mflv_4998|M.gilvum_PYR-GCK          V-------RDSRTVSEPYETTYLTEIGWNVGSVARTAEITTTR-KSAGDR
Mvan_1379|M.vanbaalenii_PYR-1       V-------SDSRGVPQPYEKPYVTEVSWNYAGTTHTAEIRTRQ-MSAGDR
TH_3263|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

MMAR_3501|M.marinum_M               IQVWVDRDDNLVRPPTPTWHAAVDAVGVTMVILLSMCVVLAALVAAVRTQ
MAV_1986|M.avium_104                VEIWVDDTGSPVTPPD--RTALDEAVAFAVVSWCAVSLPAAALFAAARAA
Mb1762c|M.bovis_AF2122/97           VGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAGALLALTRAI
Rv1733c|M.tuberculosis_H37Rv        VGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAGALLALTRAI
MSMEG_1738|M.smegmatis_MC2_155      VQIWVDAKGQRVPPPISPTTARAYATGSAVALWAAITVLCGLLAALTRKV
Mflv_4998|M.gilvum_PYR-GCK          LTIWVDDSGDLVRKGLTDGDAATQAVVGALGVWFAVTGLGVATWMLLRLR
Mvan_1379|M.vanbaalenii_PYR-1       VRIWVDDAGNRTVMVPSDHDAAAEAVIAALALWSVASGTGLAGWLLLRMR
TH_3263|M.thermoresistible__bu      ----------------ADTAPAAAAVAAAVMAGVAVTAAAMCG--VTRVV
                                                        .   *.  ::                 *  

MMAR_3501|M.marinum_M               LDRVRDAQWDRELSCLQDDGGRTNRY--
MAV_1986|M.avium_104                LDRRRYAAWQRDFDRLVDQR--------
Mb1762c|M.bovis_AF2122/97           LIRVRNASWQHDIDSLFCTQR-------
Rv1733c|M.tuberculosis_H37Rv        LIRVRNASWQHDIDSLFCTQR-------
MSMEG_1738|M.smegmatis_MC2_155      LDHQRAHAWSDELHLLLDHGDGRTKWPG
Mflv_4998|M.gilvum_PYR-GCK          LDHLRSQNWDRELDDLADNGGRSNNTT-
Mvan_1379|M.vanbaalenii_PYR-1       LNRMRFQAWDRELDDLADNGGRTNNNTP
TH_3263|M.thermoresistible__bu      CDRIRTARWEHGLDSLEDAVWP------
                                      : *   *.  :  *