For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTKGRDHQRLTGGRGGDAAAELETVHIPLPRILLAHLFGRNPLVRVSDRVQALIFVLAVAVSLAAVPVAA TIGTAVHESRSRVYAEQSQTWRTVTATAVGDSHPRRDLDSPTVRVPARWQYAGAEHAGDVIAPLNVKAGD RVEIWVDDTGSPVTPPDRTALDEAVAFAVVSWCAVSLPAAALFAAARAALDRRRYAAWQRDFDRLVDQR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1986 | - | - | 100% (210) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1762c | - | 1e-35 | 44.90% (196) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_4998 | - | 1e-20 | 34.27% (178) | putative transmembrane protein |
| M. tuberculosis H37Rv | Rv1733c | - | 1e-34 | 44.39% (196) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3501 | - | 4e-30 | 41.48% (176) | hypothetical protein MMAR_3501 |
| M. smegmatis MC2 155 | MSMEG_1127 | - | 3e-36 | 44.39% (187) | transmembrane protein |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_1379 | - | 1e-26 | 37.78% (180) | putative transmembrane protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1762c|M.bovis_AF2122/97 MIATTRDRE----------GATMITFRLRLPCR-TILRVFSRNPLVRGTD
Rv1733c|M.tuberculosis_H37Rv MIATTRDRE----------GATMITFRLRLPCR-TILRVFSRNPLVRGTD
MAV_1986|M.avium_104 MTTKGRDHQRLTGGRGGDAAAELETVHIPLPRI-LLAHLFGRNPLVRVSD
MMAR_3501|M.marinum_M ----------------------METFKLDPRDW-WIARIAGRNPLLRRAD
MSMEG_1127|M.smegmatis_MC2_155 ----------------------MDTFTLGMPRWPFLLRLWGRHPLVRPTD
Mflv_4998|M.gilvum_PYR-GCK ----------------------MQTFTLGFGVW--LRRLASRSPLVRSTD
Mvan_1379|M.vanbaalenii_PYR-1 ----------------------MQSNTFGTRVW--MRRLVARSPIVRGTD
: : : : :: .* *::* :*
Mb1762c|M.bovis_AF2122/97 RLEAVVMLLAVTVSLLTIPFAAAAGTAVHDSRSHVYAHQAQTRHPATATV
Rv1733c|M.tuberculosis_H37Rv RLEAVVMLLAVTVSLLTIPFAAAAGTAVQDSRSHVYAHQAQTRHPATATV
MAV_1986|M.avium_104 RVQALIFVLAVAVSLAAVPVAATIGTAVHESRSRVYAEQSQTWRTVTATA
MMAR_3501|M.marinum_M RVEALVVLIALAASLVAIPVAAVLGAVVFNARADQYAEQAQVRHPVTAEV
MSMEG_1127|M.smegmatis_MC2_155 RIEAFAVVLTVVVMLVTAPIAAAIGTTVYDARRTMYAEQADTRQVVTATV
Mflv_4998|M.gilvum_PYR-GCK RVEAAVMTLIVVAGVCAVPIAGAVGTAEYDRLTNSLAAERLTHREVDATV
Mvan_1379|M.vanbaalenii_PYR-1 RIEAAGLLLVVALSILTVPIAGAVGTAEYDRLAHTFAEQRLVKHEVDATA
*::* . : :. : : *.*.. *:. : * : . : . * .
Mb1762c|M.bovis_AF2122/97 IDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDR
Rv1733c|M.tuberculosis_H37Rv IDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDR
MAV_1986|M.avium_104 V-------GDSHPRRDLDSPTVRVPARWQYAGAEHAGDVIAPLNVKAGDR
MMAR_3501|M.marinum_M T-------GTT---RNPNTEAVVVQVRWPGAAAQHSGSLQRTSPVKAGQR
MSMEG_1127|M.smegmatis_MC2_155 I-------DDDAAQAVLRTNTALMPARWSVAGVEHTGAVDVASTAKTGDV
Mflv_4998|M.gilvum_PYR-GCK VR-------DSRTVSEPYETTYLTEIGWNVGSVARTAEITTTRKS-AGDR
Mvan_1379|M.vanbaalenii_PYR-1 VS-------DSRGVPQPYEKPYVTEVSWNYAGTTHTAEIRTRQMS-AGDR
* . ::. : :*:
Mb1762c|M.bovis_AF2122/97 VGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAGALLALTRAI
Rv1733c|M.tuberculosis_H37Rv VGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAGALLALTRAI
MAV_1986|M.avium_104 VEIWVDDTGSPVTPPD--RTALDEAVAFAVVSWCAVSLPAAALFAAARAA
MMAR_3501|M.marinum_M IQVWVDRDDNLVRPPTPTWHAAVDAVGVTMVILLSMCVVLAALVAAVRTQ
MSMEG_1127|M.smegmatis_MC2_155 VEIWVDDRGERTSAPTPVGLAAVEAVTGALVLWLVVGGIQGGLLMAIRAL
Mflv_4998|M.gilvum_PYR-GCK LTIWVDDSGDLVRKGLTDGDAATQAVVGALGVWFAVTGLGVATWMLLRLR
Mvan_1379|M.vanbaalenii_PYR-1 VRIWVDDAGNRTVMVPSDHDAAAEAVIAALALWSVASGTGLAGWLLLRMR
: :*** .. . * :*. :: . *
Mb1762c|M.bovis_AF2122/97 LIRVRNASWQHDIDSLFCTQR-------
Rv1733c|M.tuberculosis_H37Rv LIRVRNASWQHDIDSLFCTQR-------
MAV_1986|M.avium_104 LDRRRYAAWQRDFDRLVDQR--------
MMAR_3501|M.marinum_M LDRVRDAQWDRELSCLQDDGGRTNRY--
MSMEG_1127|M.smegmatis_MC2_155 CDRVRSAAWQRELDHLAGTDGFQYPTP-
Mflv_4998|M.gilvum_PYR-GCK LDHLRSQNWDRELDDLADNGGRSNNTT-
Mvan_1379|M.vanbaalenii_PYR-1 LNRMRFQAWDRELDDLADNGGRTNNNTP
: * *::::. *