For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MQSNTFGTRVWMRRLVARSPIVRGTDRIEAAGLLLVVALSILTVPIAGAVGTAEYDRLAHTFAEQRLVKH EVDATAVSDSRGVPQPYEKPYVTEVSWNYAGTTHTAEIRTRQMSAGDRVRIWVDDAGNRTVMVPSDHDAA AEAVIAALALWSVASGTGLAGWLLLRMRLNRMRFQAWDRELDDLADNGGRTNNNTP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1379 | - | - | 100% (196) | putative transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1762c | - | 2e-24 | 34.64% (179) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_4998 | - | 5e-62 | 56.92% (195) | putative transmembrane protein |
| M. tuberculosis H37Rv | Rv1733c | - | 3e-24 | 34.64% (179) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3501 | - | 4e-24 | 32.79% (183) | hypothetical protein MMAR_3501 |
| M. avium 104 | MAV_1986 | - | 9e-27 | 37.78% (180) | transmembrane protein |
| M. smegmatis MC2 155 | MSMEG_1127 | - | 1e-27 | 39.18% (194) | transmembrane protein |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3501|M.marinum_M ----------------------METFKLDPRDW-WIARIAGRNPLLRRAD
MAV_1986|M.avium_104 MTTKGRDHQRLTGGRGGDAAAELETVHIPLPRI-LLAHLFGRNPLVRVSD
Mb1762c|M.bovis_AF2122/97 MIATTRDRE----------GATMITFRLRLPCR-TILRVFSRNPLVRGTD
Rv1733c|M.tuberculosis_H37Rv MIATTRDRE----------GATMITFRLRLPCR-TILRVFSRNPLVRGTD
MSMEG_1127|M.smegmatis_MC2_155 ----------------------MDTFTLGMPRWPFLLRLWGRHPLVRPTD
Mvan_1379|M.vanbaalenii_PYR-1 ----------------------MQSNTFGTRVW--MRRLVARSPIVRGTD
Mflv_4998|M.gilvum_PYR-GCK ----------------------MQTFTLGFGVW--LRRLASRSPLVRSTD
: : : : :: .* *::* :*
MMAR_3501|M.marinum_M RVEALVVLIALAASLVAIPVAAVLGAVVFNARADQYAEQAQVRHPVTAEV
MAV_1986|M.avium_104 RVQALIFVLAVAVSLAAVPVAATIGTAVHESRSRVYAEQSQTWRTVTATA
Mb1762c|M.bovis_AF2122/97 RLEAVVMLLAVTVSLLTIPFAAAAGTAVHDSRSHVYAHQAQTRHPATATV
Rv1733c|M.tuberculosis_H37Rv RLEAVVMLLAVTVSLLTIPFAAAAGTAVQDSRSHVYAHQAQTRHPATATV
MSMEG_1127|M.smegmatis_MC2_155 RIEAFAVVLTVVVMLVTAPIAAAIGTTVYDARRTMYAEQADTRQVVTATV
Mvan_1379|M.vanbaalenii_PYR-1 RIEAAGLLLVVALSILTVPIAGAVGTAEYDRLAHTFAEQRLVKHEVDATA
Mflv_4998|M.gilvum_PYR-GCK RVEAAVMTLIVVAGVCAVPIAGAVGTAEYDRLTNSLAAERLTHREVDATV
*::* . : :. : : *.*.. *:. : * : . : . * .
MMAR_3501|M.marinum_M T-------GTT---RNPNTEAVVVQVRWPGAAAQHSGSLQRTSPVKAGQR
MAV_1986|M.avium_104 V-------GDSHPRRDLDSPTVRVPARWQYAGAEHAGDVIAPLNVKAGDR
Mb1762c|M.bovis_AF2122/97 IDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDR
Rv1733c|M.tuberculosis_H37Rv IDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDR
MSMEG_1127|M.smegmatis_MC2_155 I-------DDDAAQAVLRTNTALMPARWSVAGVEHTGAVDVASTAKTGDV
Mvan_1379|M.vanbaalenii_PYR-1 VS-------DSRGVPQPYEKPYVTEVSWNYAGTTHTAEIRTRQMS-AGDR
Mflv_4998|M.gilvum_PYR-GCK VR-------DSRTVSEPYETTYLTEIGWNVGSVARTAEITTTRKS-AGDR
* . ::. : :*:
MMAR_3501|M.marinum_M IQVWVDRDDNLVRPPTPTWHAAVDAVGVTMVILLSMCVVLAALVAAVRTQ
MAV_1986|M.avium_104 VEIWVDDTGSPVTPPD--RTALDEAVAFAVVSWCAVSLPAAALFAAARAA
Mb1762c|M.bovis_AF2122/97 VGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAGALLALTRAI
Rv1733c|M.tuberculosis_H37Rv VGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAGALLALTRAI
MSMEG_1127|M.smegmatis_MC2_155 VEIWVDDRGERTSAPTPVGLAAVEAVTGALVLWLVVGGIQGGLLMAIRAL
Mvan_1379|M.vanbaalenii_PYR-1 VRIWVDDAGNRTVMVPSDHDAAAEAVIAALALWSVASGTGLAGWLLLRMR
Mflv_4998|M.gilvum_PYR-GCK LTIWVDDSGDLVRKGLTDGDAATQAVVGALGVWFAVTGLGVATWMLLRLR
: :*** .. . * :*. :: . *
MMAR_3501|M.marinum_M LDRVRDAQWDRELSCLQDDGGRTNRY--
MAV_1986|M.avium_104 LDRRRYAAWQRDFDRLVDQR--------
Mb1762c|M.bovis_AF2122/97 LIRVRNASWQHDIDSLFCTQR-------
Rv1733c|M.tuberculosis_H37Rv LIRVRNASWQHDIDSLFCTQR-------
MSMEG_1127|M.smegmatis_MC2_155 CDRVRSAAWQRELDHLAGTDGFQYPTP-
Mvan_1379|M.vanbaalenii_PYR-1 LNRMRFQAWDRELDDLADNGGRTNNNTP
Mflv_4998|M.gilvum_PYR-GCK LDHLRSQNWDRELDDLADNGGRSNNTT-
: * *::::. *