For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSSFRVPAIDISPYVTQGSASSRAAVAEAMDHACSTVGFVQIHGHGIDPGVIAGLTDAADAFFGLPLAEK NRWRRPASENRGYSPPKSESLRLSLDAASTNNMNDFFEAFNVGRSLDDYPNVPDDVRHHYATNTWPDVDG FDSAVWAYFGEAERVATTMTTIFADALHLPVDYFTSRTGHSVNTLRINNYALPEDTRVPTDGELIGMGEH TDYGIVTVLWADQAPGLQILGSDGAWHDVRPDDGALLINLGDLTARLTNERWLSTLHRVRPPVVDGRVQR RRSAAFFFDANADAVIAPHPSFVDASRPALYEPVTVDEHLRAKLADSRIGIPNTAAERESARLHASSSSG AQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1299 | - | - | 100% (352) | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
M. smegmatis MC2 155 | MSMEG_4008 | - | 2e-47 | 36.65% (322) | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
M. smegmatis MC2 155 | MSMEG_4685 | - | 5e-38 | 33.03% (327) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2580 | - | 5e-29 | 30.85% (295) | 2OG-Fe(II) oxygenase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4434c | - | 8e-14 | 26.67% (315) | putative iron/ascorbate dependent oxidoreductase |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_4913 | - | 4e-16 | 28.62% (276) | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
M. thermoresistible (build 8) | TH_4524 | - | 2e-37 | 35.37% (328) | PUTATIVE 2OG-Fe(II) oxygenase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4054 | - | 9e-31 | 29.66% (327) | 2OG-Fe(II) oxygenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2580|M.gilvum_PYR-GCK ---------MSVIATVDLSRWREGG--PAAEDVAAQVDAGLQRAGFILVT Mvan_4054|M.vanbaalenii_PYR-1 ---------MSVIATVDLSRWRAGG--AAADAVAADVDEGLQRAGFILVS MSMEG_1299|M.smegmatis_MC2_155 ------MSSFR-VPAIDISPYVTQGSASSRAAVAEAMDHACSTVGFVQIH TH_4524|M.thermoresistible__bu -----MAGDFTSVPVIDIS-ALRHGSGPGYRRAVTALGDAARHVGFAQLV MAB_4434c|M.abscessus_ATCC_199 MAVKTVAPKRLASNHGRVAELPVIDLSSDSNQLRAALREVAHEVGFFYLT MAV_4913|M.avium_104 ------MSNDMCPVPG-VTAVPGVDLRADPDVLRDGLREAAHRVGFFYLT :: . . : .** : Mflv_2580|M.gilvum_PYR-GCK GHGVDPDLARDVRAAAREFFALDPTVKAGYSV--PVGGRGWIGPGAEANG Mvan_4054|M.vanbaalenii_PYR-1 GHGVSASLARDVRAAAREFFALPDEVKSGYSV--PVGGHGWIGPGAEANG MSMEG_1299|M.smegmatis_MC2_155 GHGIDPGVIAGLTDAADAFFGLPLAEKNRWRR-PASENRGYSPPKSESLR TH_4524|M.thermoresistible__bu GHGIDPALFDALVDRTRAFFALPAAEKHRVYIGNSTNHRGYVPPGEE--- MAB_4434c|M.abscessus_ATCC_199 GHGVSPQLVHEVLSAARKLFALSEADKEAIAMVRSPHFRGFTRLGGE--- MAV_4913|M.avium_104 GHGVPADLVDRVLDAARRFFRLPQADKDAVAMVRSPHFRGYTRLGGE--- ***: . : : : :* * * . :*: * Mflv_2580|M.gilvum_PYR-GCK ---YAEGTETPPDLKESFSLGAETATG--DAEVDRIWFA-PNVWPREVPE Mvan_4054|M.vanbaalenii_PYR-1 ---YAEGTETPPDLKETFSLGAETATG--DAEVDRIWFA-PNVWPREVPA MSMEG_1299|M.smegmatis_MC2_155 LSLDAASTNNMNDFFEAFNVGRSLDDYPNVPDDVRHHYA-TNTWP-DVDG TH_4524|M.thermoresistible__bu -----VFAGGTADTKEAFDLSYELPADDPRYLAGDPLLG-PNQWP-ELTG MAB_4434c|M.abscessus_ATCC_199 ------LTGGLTDWREQIDVGPERAASPTADGRDYMWLQGPNQWPAAVPE MAV_4913|M.avium_104 ------RTRGAVDWREQIDIGPQRPPIGGLDKSDYRWLQGPNQWPAALPE : * * :.:. . .* ** : Mflv_2580|M.gilvum_PYR-GCK LAPLVEEYTAQMRRVADDLLALCAHALGLSVNPFAALAS-APTWTMNINH Mvan_4054|M.vanbaalenii_PYR-1 LQPLLTEYTAQMRGVADDLLALFAHALKLPANPFAELAS-TPTWTMNINH MSMEG_1299|M.smegmatis_MC2_155 FDSAVWAYFGEAERVATTMTTIFADALHLPVDYFTSRTG-HSVNTLRINN TH_4524|M.thermoresistible__bu FREAVTAWYDAVFALSRAILRAFAVALGQPPDRFDRYVT-TPPSQLRLIH MAB_4434c|M.abscessus_ATCC_199 LRPALESWDIALAEVGRKLLREWAIALGSDGAVFSEAFGDKPATLIKVIR MAV_4913|M.avium_104 LPGLIAEWDAALSGVARTLLRHWAAALGSPADVFDAAFADAPATLIKIIR : : : :. : * ** * . :.: . Mflv_2580|M.gilvum_PYR-GCK YPPVSVVGEPEPGQ-FRIGPHTDFGTVTILDREPGAGGLQVYSEQ---AG Mvan_4054|M.vanbaalenii_PYR-1 YPPVSVVGEPEPGQ-FRIGPHTDFGTVTILDREPGAGGLQVYSED---AG MSMEG_1299|M.smegmatis_MC2_155 YALPEDTRVPTDGELIGMGEHTDYGIVTVLWAD-QAPGLQILGSD---GA TH_4524|M.thermoresistible__bu YPA-----DPSAVDRPGIGAHTDYECFTLLRP--TAPGLEVLNAA---GQ MAB_4434c|M.abscessus_ATCC_199 YPS-------DGTTSQGVGAHRDSGVLTLLLTEPEVGGLQVEVDG----A MAV_4913|M.avium_104 YPG-------RAAGPQGVGAHRDAGVLTLLLAEPGSRGLQVRRGGPRGDG *. :* * * .*:* **:: Mflv_2580|M.gilvum_PYR-GCK WENAPYDPAALTVNIGDLLEYWSGRRWPSGRHRVLPPQPDAPEEDLVSLI Mvan_4054|M.vanbaalenii_PYR-1 WQDAPYDPDALTVNIGDLLEYWSGRRWPSGRHRVLPPQPGAPEEDLVSLI MSMEG_1299|M.smegmatis_MC2_155 WHDVRPDDGALLINLGDLTARLTNERWLSTLHRVRPPVVDGRVQRRRSAA TH_4524|M.thermoresistible__bu WIDVPYLDDAFVLNIGDLLEIWTNGAFVATTHRVR-----RVTSERYSFP MAB_4434c|M.abscessus_ATCC_199 WLEAPGREGAFIVNIGELLERASGGYLRATRHRVT---LTG--APRISVA MAV_4913|M.avium_104 WIDVPPRQGAFIVNIGELLEAATRGYLRATEHRVN---LAGSTAERISVP * :. *: :*:*:* : : *** * Mflv_2580|M.gilvum_PYR-GCK YFYEANHDALVTPLSPPIGR--AEGLEPVLSADFIKQRLDAITVS----- Mvan_4054|M.vanbaalenii_PYR-1 YFYEANHDALVTPLDPPVGR--VSGLAPVTSADFIKERLDAITVG----- MSMEG_1299|M.smegmatis_MC2_155 FFFDANADAVIAPHPSFVDASRPALYEPVTVDEHLRAKLADSRIGIPNTA TH_4524|M.thermoresistible__bu LFVNVDADTEVAPLAEFVDG--TARYAPVIAGEHLFAQTARSFRYLQDRI MAB_4434c|M.abscessus_ATCC_199 YFFNPRLDARIPVLELPPELRDRARG---VSADPDDPIHATYGENAWKSR MAV_4913|M.avium_104 YFFNPRLDARIPVLSLPPELRARAGERWTPSEDPADPIFSVYGRNAWKSR * : *: :. : Mflv_2580|M.gilvum_PYR-GCK ------------------------- Mvan_4054|M.vanbaalenii_PYR-1 ------------------------- MSMEG_1299|M.smegmatis_MC2_155 AERESARLHASSSSGAQ-------- TH_4524|M.thermoresistible__bu RRGEVSLPDGAYPLSAFGRRAASPR MAB_4434c|M.abscessus_ATCC_199 LRAHPDVAAVHGHLDS--------- MAV_4913|M.avium_104 LRSHPDVASAHGFSAHHGAAD----