For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVMVKAVLFDFSGTLFRLEEDESWFEGMTVDEREVDGHVQAELMRRLTAPTGRSVQMSDEQYHAWVNRDL APHLHREAYLHVLRESGLADPHAESLYGRVIDPDSWTAYPDTATVLKSLKQQDIKTAVVSNIAFDVRPAF TALGIDADVDEFVLSYEVGAVKPDAAIFTTTLQRLGVAPQDALMVGDSEEADGGATAVGCAFALVDPLPT TERPDGLIAAVSSVGIAT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1078 | - | - | 100% (229) | hydrolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3410 | - | 6e-07 | 27.73% (119) | hypothetical protein Mb3410 |
M. gilvum PYR-GCK | Mflv_0023 | - | 8e-90 | 72.93% (229) | HAD family hydrolase |
M. tuberculosis H37Rv | Rv3376 | - | 6e-07 | 27.73% (119) | hypothetical protein Rv3376 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_4652 | - | 2e-12 | 80.00% (40) | PUTATIVE - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0949 | - | 5e-91 | 73.04% (230) | HAD family hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0023|M.gilvum_PYR-GCK -MTDLDAVLFDFSGTLF-----RLEEDESWFDGMTLDS----AGNRDVDE Mvan_0949|M.vanbaalenii_PYR-1 -MSDLQAVLFDYSGTLF-----RLEEDESWFAGMELDTPLSPDANREIDG MSMEG_1078|M.smegmatis_MC2_155 MVVMVKAVLFDFSGTLF-----RLEEDESWFEGMTVDE-------REVDG TH_4652|M.thermoresistible__bu -------VLFDFSGTLF-----RLEEDASWFGGMTIAE------QREVDR Mb3410|M.bovis_AF2122/97 --MSISAVVFDRDGVLTSFDWTRAEEDVRRITGLPLEE-----IERRWGG Rv3376|M.tuberculosis_H37Rv --MSISAVVFDRDGVLTSFDWTRAEEDVRRITGLPLEE-----IERRWGG *:** .*.* * *** : *: : * . Mflv_0023|M.gilvum_PYR-GCK HVQAELMRRLTAPTGRSVSMTPEALEAWMKRDLAPHLHREAYLHVLRESG Mvan_0949|M.vanbaalenii_PYR-1 HVQAELMRRLTAPTGHSVSMTPDALDAWLNRDLAPHLHREAYLHVLRESG MSMEG_1078|M.smegmatis_MC2_155 HVQAELMRRLTAPTGRSVQMSDEQYHAWVNRDLAPHLHREAYLHVLRESG TH_4652|M.thermoresistible__bu HVQVELMR------------------------------------------ Mb3410|M.bovis_AF2122/97 WLNGLTIDDAFVETQP----------------------ISEFLSSLAREL Rv3376|M.tuberculosis_H37Rv WLNGLTIDDAFVETQP----------------------ISEFLSSLAREL :: : Mflv_0023|M.gilvum_PYR-GCK LACEHAESLYSRVIDPACWTPYPDTATVLTGLRRRGIRTAVVSN--IAFD Mvan_0949|M.vanbaalenii_PYR-1 LAHHHAESLYSRVIDPACWTPYPDTATVLDGLHRRGISTAVVSN--IAFD MSMEG_1078|M.smegmatis_MC2_155 LADPHAESLYGRVIDPDSWTAYPDTATVLKSLKQQDIKTAVVSN--IAFD TH_4652|M.thermoresistible__bu -------------------------------------------------- Mb3410|M.bovis_AF2122/97 ELGSKARDELVRLDYMAFAQGYPDARPALEEARRRGLKVGVLTNNSLLVS Rv3376|M.tuberculosis_H37Rv ELGSKARDELVRLDYMAFAQGYPDARPALEEARRRGLKVGVLTNNSLLVS Mflv_0023|M.gilvum_PYR-GCK LRPAFDGVG---TVDEFVLSFEVGAVKPDPSIFQTALDRLGVPAERALMV Mvan_0949|M.vanbaalenii_PYR-1 VRPAFEVLGAAGHVDEFVLSFEVGAVKPDPAIFQTALDRLGVAADRALMV MSMEG_1078|M.smegmatis_MC2_155 VRPAFTALGIDADVDEFVLSYEVGAVKPDAAIFTTTLQRLGVAPQDALMV TH_4652|M.thermoresistible__bu -------------------------------------------------- Mb3410|M.bovis_AF2122/97 ARSLLQCAALHDLVDVVLSSQMIGAAKPDPRAYQAIAEALGVSTTSCLFF Rv3376|M.tuberculosis_H37Rv ARSLLQCAALHDLVDVVLSSQMIGAAKPDPRAYQAIAEALGVSTTSCLFF Mflv_0023|M.gilvum_PYR-GCK GDSDEADGGARALGCAFALVDPLPTRERSDGLLGALRAHGIRL----- Mvan_0949|M.vanbaalenii_PYR-1 GDSDEADGGARTLGCAFALVDPLPTAERKDGLVAALWANGIQL----- MSMEG_1078|M.smegmatis_MC2_155 GDSEEADGGATAVGCAFALVDPLPTTERPDGLIAAVSSVGIAT----- TH_4652|M.thermoresistible__bu ----------------LVLVDPLPSGQRPDGLRTALRDHGLRV----- Mb3410|M.bovis_AF2122/97 DDIADWVEGARCAGMRAYLVD--RSGQTRDGVVRDLSSLGAILDGAGP Rv3376|M.tuberculosis_H37Rv DDIADWVEGARCAGMRAYLVD--RSGQTRDGVVRDLSSLGAILDGAGP *** : : **: : *