For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RRGTGWWVMVAVLAVGSVAALGLGLWQMSEKNRPAPVLVADQAAARDEVTQFVSDNLEKLLSYTPRTDDT DIADLASVLSGKAADTYRDDMRTKLSVARTNGVTQTSTIRQTAVESLTDDTAAVLAFVDQTVASTGNQTR SQSGYAMRVGLRKSGGAWTIEALEPL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0885 | - | - | 100% (167) | hypothetical protein MSMEG_0885 |
| M. smegmatis MC2 155 | MSMEG_5207 | - | 2e-10 | 28.14% (167) | hypothetical protein MSMEG_5207 |
| M. smegmatis MC2 155 | MSMEG_2865 | - | 2e-10 | 28.57% (168) | hypothetical protein MSMEG_2865 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1397c | - | 3e-10 | 32.72% (162) | hypothetical protein Mb1397c |
| M. gilvum PYR-GCK | Mflv_2527 | - | 6e-11 | 28.12% (160) | hypothetical protein Mflv_2527 |
| M. tuberculosis H37Rv | Rv1362c | - | 6e-11 | 33.33% (162) | hypothetical protein Rv1362c |
| M. leprae Br4923 | MLBr_02598 | - | 9e-06 | 26.28% (156) | putative secreted protein |
| M. abscessus ATCC 19977 | MAB_4534c | - | 5e-08 | 25.00% (160) | hypothetical protein MAB_4534c |
| M. marinum M | MMAR_4175 | - | 5e-26 | 36.75% (166) | hypothetical protein MMAR_4175 |
| M. avium 104 | MAV_0955 | - | 1e-12 | 31.37% (153) | hypothetical protein MAV_0955 |
| M. thermoresistible (build 8) | TH_3191 | - | 2e-11 | 25.62% (160) | PUTATIVE twin-arginine translocation pathway signal |
| M. ulcerans Agy99 | MUL_2863 | - | 3e-10 | 28.32% (173) | Mce associated membrane protein |
| M. vanbaalenii PYR-1 | Mvan_4131 | - | 3e-12 | 27.75% (173) | twin-arginine translocation pathway signal |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_0885|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_4175|M.marinum_M --------------------------------------------------
Mb1397c|M.bovis_AF2122/97 MTDDVRDVNTETTDATEVAEIDSAAGEAGDSATEAFDTDSATES------
Rv1362c|M.tuberculosis_H37Rv MTDDVRDVNTETTDATEVAEIDSAAGEAGDSATEAFDTDSATES------
MAV_0955|M.avium_104 --------------------MTVEHGSSLDDVETTDRTESPSAG------
Mflv_2527|M.gilvum_PYR-GCK MSDREQTPDE-DVDATVVAEDPTPE----------DEVVTGTEP------
Mvan_4131|M.vanbaalenii_PYR-1 MTDENRTEDAAETDAALVEGDVIADVDSTDEADDVDEAAAGREPGDDDKA
TH_3191|M.thermoresistible__bu VTDEVKHTADTTEKAGGVAVGVA-D----------EAVAAAPDT------
MUL_2863|M.ulcerans_Agy99 --------------MTAVSRPGAGECG---------DTDTAGSG------
MLBr_02598|M.leprae_Br4923 --------------------------------------------------
MAB_4534c|M.abscessus_ATCC_199 MSRNMLRVILFDLLAPVVTVLAIVELGVILRWPVWWVVVCTAVCVLIVEG
MSMEG_0885|M.smegmatis_MC2_155 --MRRG----TGWWVMVAVLAVGSVAALGLGLWQMSEKNR-----PAPVL
MMAR_4175|M.marinum_M --MTQHGAPRAAWWVVVLALTAATMMAAALGGWQMLAKNRQLPPVAGPAL
Mb1397c|M.bovis_AF2122/97 -TAQKG-QRHRDLWRMQVTLKPVPVILILLMLISGGATGWLYLEQYRPDQ
Rv1362c|M.tuberculosis_H37Rv -TAQKG-QRHRDLWRMQVTLKPVPVILILLMLISGGATGWLYLEQYRPDQ
MAV_0955|M.avium_104 -SARAGRLATIKLWAGRCAARWRSIVATALVAGAVGVTVSLYFVLYRPDQ
Mflv_2527|M.gilvum_PYR-GCK --EPAPATPRATSRRSGRVLIGAIVAAVLMLAGSAGLAGWLYYNEYRPDR
Mvan_4131|M.vanbaalenii_PYR-1 EADSGAATTKPPTRRPVRGLVTAILLAVALLA-SAGMAGWLYLNDYRPDQ
TH_3191|M.thermoresistible__bu ---PGDNGRDRTAWRAVLKEPSGLILLIVALVAAAAVTASLWKFQYRLDV
MUL_2863|M.ulcerans_Agy99 --EPPAVVRRRLRWWPVIAYG-LLPALALLLAGGTGFAKWQDCAVRDAAQ
MLBr_02598|M.leprae_Br4923 ----MAAAEGGGSWRNRRAGQRTAIAVVVAAVLFVGSAAFAGAAVQPYLA
MAB_4534c|M.abscessus_ATCC_199 MAVNAYLARRDSVTVGTDDDGPALRTGIVALATASVLAVAVVGYARWTLP
MSMEG_0885|M.smegmatis_MC2_155 VADQAAARDEVTQFVSDNLEKLLSYTPRTDDTDIADLASVLSGKAADTYR
MMAR_4175|M.marinum_M VADQPAAREAVLKVAKTNVAKILTYTPQNVEEVASAAERLLTGEFLSYYR
Mb1397c|M.bovis_AF2122/97 QTDSGAARAAGAAASDG-TIALLSYSPDTLDQDFATARSHLAGDFLSYYD
Rv1362c|M.tuberculosis_H37Rv QTDSGAARAAVAAASDG-TIALLSYSPDTLDQDFATARSHLAGDFLSYYD
MAV_0955|M.avium_104 RVGDAAAHRAVQAASDG-AAAVLSYAPESLNRDFAKAQSYLTGDFLAYYT
Mflv_2527|M.gilvum_PYR-GCK ETDPAAAQVALEAAKTG-TIALLSYSPESLDQDFANAKSKLTGDFLDYYT
Mvan_4131|M.vanbaalenii_PYR-1 QTDPAAAQVALDAARTG-TVALLSYSPESLDQDFANAKAKLTGEFLSYYT
TH_3191|M.thermoresistible__bu QTNTDAAQVAVDAATEG-TIALLSYAPETLQEDFAAAKEHLTGEFLDYYT
MUL_2863|M.ulcerans_Agy99 -----ARAESVQAATAG-TIALLSYRPDTVRSDLEAARAKLTGAFLSDYT
MLBr_02598|M.leprae_Br4923 DRATVAVKLEVARTAANAITVLWTYTPENMDTLADRAATYVSGDFGAQYR
MAB_4534c|M.abscessus_ATCC_199 DREGNADRAAVTDVAATVSEAVVNFAPDNPDTSVRQATEHMTATQGQSFT
* : .: * . ::. :
MSMEG_0885|M.smegmatis_MC2_155 DDM-RTKLSVARTNGVTQTSTIRQTAVESLTDDTAAVLAFVDQTVAS-TG
MMAR_4175|M.marinum_M QFTGQTVVPTARREGISTTATVSGAGVESLTSQRASILAFVDQSTTT-RD
Mb1397c|M.bovis_AF2122/97 QFTQQIVAPAAKQKSLKTTAKVVRAAVSELHPDSAVVLVFVDQSTTS-KD
Rv1362c|M.tuberculosis_H37Rv QFTQQIVAPAAKQKSLKTTAKVVRAAVSELHPDSAVVLVFVDQSTTS-KD
MAV_0955|M.avium_104 KFTEQIAALAQ-QKQVTETAKVVRAAVSELHPDSAVVLVFINQTATS-KQ
Mflv_2527|M.gilvum_PYR-GCK QFTEQIVTPAAKEKSVKTAASVVRAGVSQIAADSAEVLVFINQTTTS-KE
Mvan_4131|M.vanbaalenii_PYR-1 QFTEQIVTPAAKEKSVKTAASVVRAAVADIQPESAEVLVFINQTTTS-KE
TH_3191|M.thermoresistible__bu EFTDTVVTPAAMEKQVSTSANVVKAAISEIHPDSAVVLVFLNQMTTS-KE
MUL_2863|M.ulcerans_Agy99 SLTRDVVIPGAKQKDISAVATVPAAASVSATGEHAIVLLFVNQTIIV-SQ
MLBr_02598|M.leprae_Br4923 KFVDAIVGPNK-QAKITNSTEVTGVAVESLDASNAIAIVYTNTTSTSPLT
MAB_4534c|M.abscessus_ATCC_199 RDFGRATAELK-AKGISQQGEIVSVGIEALGPGDAVMATLVRRTSVA--A
:. : .. *
MSMEG_0885|M.smegmatis_MC2_155 NQTRSQSGYAMRVGLRKSGGAWTIEALEPL----------
MMAR_4175|M.marinum_M QPSPKRATSSVRVGLTKVQGTWLIDSFKPT----------
Mb1397c|M.bovis_AF2122/97 SPNPSMAASSVMVTLAKVDGNWLITKFTPV----------
Rv1362c|M.tuberculosis_H37Rv SPNPSMAASSVMVTLAKVDGNWLITKFTPV----------
MAV_0955|M.avium_104 KPEPQTTASSARVTLTKVKGSWLISKLDPLS---------
Mflv_2527|M.gilvum_PYR-GCK NPDGAFAASSVKVGMKKIDGNWLIASFDPV----------
Mvan_4131|M.vanbaalenii_PYR-1 NPDGAFAASSVKVGLKKIDGNWLIESFDPV----------
TH_3191|M.thermoresistible__bu NPDGAFAASSVKVGLKKVDGRWLIEAFDPV----------
MUL_2863|M.ulcerans_Agy99 DP-PTSTASSVRVTLDKVDGRWLISRFDPV----------
MLBr_02598|M.leprae_Br4923 KNIPALKYLSYRLFMKRSAVRWLVTRMTTITSLDLTPQL-
MAB_4534c|M.abscessus_ATCC_199 KTRPEQSVLALRLTLTKRDGRWLVDNIAPIDRIGAQVPKN
. : : : : * : : .