For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTAPLLLRGVDLAALAVALVDRLRAAGVAVSAVGPSTLVAAMHVVAPVRRSQLYWAARLTLVSRAEDLPA FDGVFDAVFSDAVLGVDPPNLKRSQAPPGIPGQQYANGADSGESGDELPWTTRPASITAAAHPPAGSAIP DRAPSWLAGRTDESFDQFDQDDLHRLGTWLQGAEAHWPRRRTLRHRRHPSGRRIDLRETIRASRTTGWEP VRLARTRRRTRPRRVVLVCDVSGSMQPYAVVYLHLMRAAAVSRRGAAHPEVFAFATTLTRLTAALSHRSP EVAVTRANAKVHDRYGGTRLGRSIAALLAAPHGNLLRGAVVVIASDGWDADAPEVLRHAMSRLRRRAHLV VWLNPRAAAPGYEPLAGAMAAALPYCDHFLPAHTLTGLRELFDVLGA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0751 | - | - | 100% (397) | hypothetical protein MSMEG_0751 |
M. smegmatis MC2 155 | MSMEG_4582 | - | 2e-10 | 27.60% (221) | hypothetical protein MSMEG_4582 |
M. smegmatis MC2 155 | MSMEG_6240 | - | 4e-08 | 26.00% (250) | hypothetical protein MSMEG_6240 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0375c | - | 1e-123 | 57.14% (399) | hypothetical protein Mb0375c |
M. gilvum PYR-GCK | Mflv_2646 | - | 3e-10 | 28.57% (224) | VWA containing CoxE family protein |
M. tuberculosis H37Rv | Rv0368c | - | 1e-122 | 57.14% (399) | hypothetical protein Rv0368c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1620 | - | 2e-08 | 30.60% (183) | hypothetical protein MAB_1620 |
M. marinum M | MMAR_0662 | - | 1e-128 | 60.85% (401) | von Willebrand factor type A domain-containing protein |
M. avium 104 | MAV_1749 | - | 3e-11 | 29.41% (221) | hypothetical protein MAV_1749 |
M. thermoresistible (build 8) | TH_1639 | - | 1e-105 | 66.90% (284) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0110 | - | 1e-125 | 60.10% (401) | von Willebrand factor type A domain-containing protein |
M. vanbaalenii PYR-1 | Mvan_3932 | - | 3e-10 | 29.46% (224) | VWA containing CoxE family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0375c|M.bovis_AF2122/97 ------MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQ Rv0368c|M.tuberculosis_H37Rv ------MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQ MMAR_0662|M.marinum_M ------MTAPLLLRGVDLAAFAAALVARLRGVGVLVSASGQANFVQAMRQ MUL_0110|M.ulcerans_Agy99 ------MTAPLLLRGVDLAAFAAALVARLRGVGVLVSASGQANFVQAMRQ TH_1639|M.thermoresistible__bu -----------------------------------VDAEG---------- MSMEG_0751|M.smegmatis_MC2_155 ------MTAPLLLRGVDLAALAVALVDRLRAAGVAVSAVGPSTLVAAMHV Mflv_2646|M.gilvum_PYR-GCK MPPRR-TRPPQPPAPHGIPGHLVEFVEALRKQGIAVGPSETVDAGQVMAT Mvan_3932|M.vanbaalenii_PYR-1 MPPRR-TRPPQPLAPHGIPGHLVEFVEALRGQGISVGPSETVDAGQVMAT MAV_1749|M.avium_104 MATRR-IRPSRPLAPHGLPGHLVGFVEALRGAGISVGPSETVDAGRVMAT MAB_1620|M.abscessus_ATCC_1997 MPPRKPPKAVLPLAPHGLPGHLVGFVEALREQGISVGPSETVDAGRVMTV *.. Mb0375c|M.bovis_AF2122/97 LVPRTPAALYWGARLTLVSRVDELATFDAVFASLFGVFGSAEPDGANRPP Rv0368c|M.tuberculosis_H37Rv LVPRTPAALYWGARLTLVSRVDELATFDAVFASLFGVFGSAEPDGANRPP MMAR_0662|M.marinum_M LVPDSRSALYWAARLTLVNRMEDLVAFDLAFAAVFGALDAAGPEAADAAR MUL_0110|M.ulcerans_Agy99 LVPDSRSALYWAARLTLVNRMEDLVAFDLAFAAVFGALDAAGPEAADAAR TH_1639|M.thermoresistible__bu --------LPWATRPATVT--------------------ASADTGADTPT MSMEG_0751|M.smegmatis_MC2_155 VAPVRRSQLYWAARLTLVSRAEDLPAFDGVFDAVF----SDAVLGVDPPN Mflv_2646|M.gilvum_PYR-GCK LGLSDRNVLREGLACAVLRRSDHRETYDALFDLYFPAALGAKTVLDDDE- Mvan_3932|M.vanbaalenii_PYR-1 LGLADRDVLREGLACAVLRRSDHRETYDALFDLYFPAALGSRTVLDDES- MAV_1749|M.avium_104 LGLGNREVLREGLACAVLRRPDHRETYDAMFDLWFPAALGARAVVTDEDA MAB_1620|M.abscessus_ATCC_1997 LGLQSRSELREGLACAVLRRADHRPTFDVLFDLWFPPALGARFVEVGEE- * . : : . . Mb0375c|M.bovis_AF2122/97 P---------------------------------------------PIAG Rv0368c|M.tuberculosis_H37Rv P---------------------------------------------PIAG MMAR_0662|M.marinum_M ----------------------------------------------PLPG MUL_0110|M.ulcerans_Agy99 ----------------------------------------------PLPG TH_1639|M.thermoresistible__bu -------------------------------------------------- MSMEG_0751|M.smegmatis_MC2_155 L---------------------------------------------KRSQ Mflv_2646|M.gilvum_PYR-GCK ---DGE-GLPPEDIEALRSALVDLLADNEELANIDERLAAMIAQIVEAYG Mvan_3932|M.vanbaalenii_PYR-1 ---DGESGLPPEDIEAMRQALLDMLTDNEELANLDERLAAMIAQIVEAYG MAV_1749|M.avium_104 GPGSGEDALPPDDVEAMREMLLDLLTENPDLADMDERLVAMIARIVEAYG MAB_1620|M.abscessus_ATCC_1997 -------GIDIDDIEQVRDELVDLLASDAG----DLPLNSLIAQIVEAYG Mb0375c|M.bovis_AF2122/97 PRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLP Rv0368c|M.tuberculosis_H37Rv PRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLP MMAR_0662|M.marinum_M PKTPAAGIVHRNGGPSGAAGGQPLPWASR--IGDQDGSVRPSIQLPDLLP MUL_0110|M.ulcerans_Agy99 PKTPAAGIVHRNGGPSGAAGGQPLPWASR--VGDQDGSVRPSIQLPDLLP TH_1639|M.thermoresistible__bu -------------------------------------------RLPDLLP MSMEG_0751|M.smegmatis_MC2_155 APPGIPGQQYANGADSGESGDE-LPWTTRPASITAAAHPPAGSAIPDRAP Mflv_2646|M.gilvum_PYR-GCK RYNSSRGPSYSSYQALKAMSLDDLEGRLLAGLLAPYGDEP--TPTQEQIA Mvan_3932|M.vanbaalenii_PYR-1 RYNSSRGPSYSSYQALKAMSLDDLEGRLLAGLLAPYGDEP--TPTQEQIA MAV_1749|M.avium_104 KYSSSRGPSFSSYQALKAMALDELEGKLLAGLLAPYGDEP--TPTQEEIA MAB_1620|M.abscessus_ATCC_1997 KYNSTRGTSYSAYQAMKSLSLDQIEAKLLTGLLGGGDEDSPVSPTDQAVA : . Mb0375c|M.bovis_AF2122/97 SRIVAR-----------------------------------ADEPFDQFD Rv0368c|M.tuberculosis_H37Rv SRIVAR-----------------------------------ADEPFDQFD MMAR_0662|M.marinum_M SRIAAL-----------------------------------AEEPFDQFD MUL_0110|M.ulcerans_Agy99 SRIAAL-----------------------------------AEEPFDQFD TH_1639|M.thermoresistible__bu SHITAR-----------------------------------ADEPFERFD MSMEG_0751|M.smegmatis_MC2_155 SWLAGR-----------------------------------TDESFDQFD Mflv_2646|M.gilvum_PYR-GCK KAIAAQRIAQLRKMVEGETKRRTAEQLGRDHVQMYGVPQLSENVEFLRAS Mvan_3932|M.vanbaalenii_PYR-1 KAVAAQRIAALRKMVESETKRRTAEQLGRDHVQMYGVPQLAENVEFLRAS MAV_1749|M.avium_104 KALAAQRITQLRKLVDAETKRRTAEQLGRDHVQMYGIPQLSENVEFLRAS MAB_1620|M.abscessus_ATCC_1997 KAIAKERISKVRQLVEAETKRRTAEQLGRERVTAYGVPQLAENVEFLRAS . :. : * : . Mb0375c|M.bovis_AF2122/97 PDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWE Rv0368c|M.tuberculosis_H37Rv PDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWE MMAR_0662|M.marinum_M AEDLRRIGGWLESTVARWPRRRSLRFESSPHGKRIDLRATMNASRVTGWE MUL_0110|M.ulcerans_Agy99 AEDLRRIGGWLESTVARWPRRRSLRFESSPHGKRIDLRATMNASRATGWE TH_1639|M.thermoresistible__bu PDDLRLLGGWLEQAVAHWPRRRSLRRENHPHGKRIDLRETLRASRRTGFE MSMEG_0751|M.smegmatis_MC2_155 QDDLHRLGTWLQGAEAHWPRRRTLRHRRHPSGRRIDLRETIRASRTTGWE Mflv_2646|M.gilvum_PYR-GCK GEQLRQMRRVVGPLARTLATRLAARRRRSRAG-EIDLRKTLRKSMSTGGV Mvan_3932|M.vanbaalenii_PYR-1 GEQLRQMRRVVGPLARTLATRLAARRRRSRAG-EIDLRKTLRKSMSTGGV MAV_1749|M.avium_104 GEQLRQMQRVVAPLARTLATRLAARRRRSRAG-TIDLRKTLRKSMSTGGV MAB_1620|M.abscessus_ATCC_1997 GEQLRNMRRVVHPLARMLASRLAARRRRAHTG-QIDLRRTLRKSMSTGGV ::*: : : . * : * . * **** *:. * ** Mb0375c|M.bovis_AF2122/97 SVLLARIRPRRRPRRVLLLCDVSRSMQPYAAIYLHLMRAAVLRR-----A Rv0368c|M.tuberculosis_H37Rv SVLLARIRPRRRPRRVLLLCDVSRSMQPYAAIYLRLMRAAVLRR-----A MMAR_0662|M.marinum_M AVRLARIRPRRRPRRVVLLCDVSRSMQPYAAIYLHLMRALVARQ-----P MUL_0110|M.ulcerans_Agy99 AVRLARIRPRRRPRRVVLLCDVSRSMQPYAAIYLHLMRALVARQ-----P TH_1639|M.thermoresistible__bu TLRLARTRPRRRDRPVVLICDVSRSMQPYTTVYLHLMRAAALHRNSRRRS MSMEG_0751|M.smegmatis_MC2_155 PVRLARTRRRTRPRRVVLVCDVSGSMQPYAVVYLHLMRAAAVSR----RG Mflv_2646|M.gilvum_PYR-GCK PIDVVLKKPHPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFS----- Mvan_3932|M.vanbaalenii_PYR-1 PIDLVLKKPHPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFS----- MAV_1749|M.avium_104 PIDVVLAKPRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFS----- MAB_1620|M.abscessus_ATCC_1997 PIDVVQKKPRPARPELVVLCDVSGSVAGFSHFTLLLVNALRQQFS----- .: :. : : ::::**** *: :: . * *:.* Mb0375c|M.bovis_AF2122/97 GGHPEVFAFSTSLTRLTSVLSHR---SAEMALHRANARVTDRYGGTFIGR Rv0368c|M.tuberculosis_H37Rv GGHPEVFAFSTSLTRLTSVLSHR---SAEMALHRANARVTDRYGGTFIGR MMAR_0662|M.marinum_M GIRPEVFAFSTSLTRLTPVLAHR---SAEVALDRANAKVADRYGGTFIGR MUL_0110|M.ulcerans_Agy99 GIRPEVFAFSTSLTRLTPVLAHR---SAEVALDRANAKVADRYGGTFIGR TH_1639|M.thermoresistible__bu GIRPEVFAFSTRLTRLTAVLAHR---SPEVARDRADAKVVDRYGGTHLGR MSMEG_0751|M.smegmatis_MC2_155 AAHPEVFAFATTLTRLTAALSHR---SPEVAVTRANAKVHDRYGGTRLGR Mflv_2646|M.gilvum_PYR-GCK --RVRVFAFIDTTDEVTELFGPDSDLAVAVQRITREAAVFTRDGHSDYGH Mvan_3932|M.vanbaalenii_PYR-1 --RVRVFAFIDTTDEVTELFGPDADLAVAVQRITREAAVYTRDGHSDYGH MAV_1749|M.avium_104 --RVRVFAFIDTTDEVTHMFGPEADLAVAIQRITREAGVYSRDGHSDYGN MAB_1620|M.abscessus_ATCC_1997 --RVRVFAFIDTTDEVTHLFTPDTDLAEAIVRITREAQVFTGDGHSDYGH : .**** .:* : : : :* * * : *. Mb0375c|M.bovis_AF2122/97 SVAALLAPPHGNALRGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVW Rv0368c|M.tuberculosis_H37Rv SVAALLAPPHGNALRGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVW MMAR_0662|M.marinum_M SVGALLEAPHGNALRGAVVIIASDGWDSEAPEVLCHALARVRRRAQLLVW MUL_0110|M.ulcerans_Agy99 SVGALLEPPHGNALRGAVVIIASDGWDSEAPKVLCHALARVRRRAQLLVC TH_1639|M.thermoresistible__bu SLAELLASPHGNALRGAVVIIASDGWDSDPPELLGHTMARLRRRAQRVVW MSMEG_0751|M.smegmatis_MC2_155 SIAALLAAPHGNLLRGAVVVIASDGWDADAPEVLRHAMSRLRRRAHLVVW Mflv_2646|M.gilvum_PYR-GCK AFVSFLDKFPNVLSPRSSLLVLGDGR-NNYRNPETDLLAHMVNAARHAHW Mvan_3932|M.vanbaalenii_PYR-1 AFVSFLDKFPNVLSPRSSLLVLGDGR-NNYRNPEAHLLAHMVNASRHAHW MAV_1749|M.avium_104 AFASFEQKFPNVLSPRTSLLVLGDGR-TNYRNPEVELLSHMVTASRHAHW MAB_1620|M.abscessus_ATCC_1997 AFKTFVEKFPTVLSPRSALLILGDGR-TNYRNPAVEVLSSMVSSSRHAHW :. : : ::: .** : . . :: : :. Mb0375c|M.bovis_AF2122/97 LNPRAAHPEFQPRASSMAAALPYCDLFLPAHSLAGLHQLLLALAGAR-- Rv0368c|M.tuberculosis_H37Rv LNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAGAR-- MMAR_0662|M.marinum_M LNPRAAQSDFEPLTGSMAAALPYCDLFLPAHSLTGVQQLLRALGGDLR- MUL_0110|M.ulcerans_Agy99 LNPRAAQSDFEPLTGSMAAALPYCDLFLPAHSLTGVQQLLRALGGDLR- TH_1639|M.thermoresistible__bu LNPRAGRPGFAPLTGAMAAALPYCDAMLPAHSLTALHEVFVTLANQ--- MSMEG_0751|M.smegmatis_MC2_155 LNPRAAAPGYEPLAGAMAAALPYCDHFLPAHTLTGLRELFDVLGA---- Mflv_2646|M.gilvum_PYR-GCK LNPEPKH-----LWGSGDSAVPRYQDVITMHECRSAKQLASVIDALLPV Mvan_3932|M.vanbaalenii_PYR-1 LNPEPRH-----LWGSGDSAVPRYQDVITMHECRSAKQLASVIDALLPV MAV_1749|M.avium_104 LNPEPKH-----LWGSGDSAVPRYQQVIPMHECRSAKQLAAVIDQLLPV MAB_1620|M.abscessus_ATCC_1997 LNPEPKN-----HWGTGDSAAKRYQDAITMHECRSAKQLAAVIDNLLPV ***.. .: :* : :. * . ::: .: