For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TPSKILDLVAAAFGELLRRAGVATSPAEVIEVRRVLGLLGARDQEALRAALRATCAKYVREQRGFDRAFD AMFGVASIVTEHDVADPSRAHTGSGLPDHLEIDEDQEIGRYAEYNERAAEVGDHFDTPDADKGFNPHKDD DDFSVSGADNQLSVSAESDAGRRGVRYTVEVDRAASSLAGDLADSVAPVVAGALHWDDPESILAWLDAYD PARTYGDDAGDQPLTAEQLDQLTQAVESFVAALADRCGLTAEPDTPAGPTDATVATDVDLACHEVLRRMR GAPRPRPAEMRGRLDMRRTTRHSLRTDGVPFRLITRTPRPDRVRLLVIADVSLSVRPVTAFTLRLAQAMH RRAHRCRVMAFVDRPVDVTEILLQTGGDDALAAVLAEAQIDLEASSDYGQVFDEMLSAQAEALDSRTAVL IVGDGRSPGLPPRTDSLRALRRRVHRLAWITPEPTRYWRQATCAMPDYAEVCDKVVVARDAEQLIARAGE LAHALS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6240 | - | - | 100% (497) | hypothetical protein MSMEG_6240 |
M. smegmatis MC2 155 | MSMEG_4582 | - | 3e-31 | 26.88% (491) | hypothetical protein MSMEG_4582 |
M. smegmatis MC2 155 | MSMEG_0751 | - | 5e-08 | 26.00% (250) | hypothetical protein MSMEG_0751 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2449c | - | 4e-32 | 27.47% (495) | hypothetical protein Mb2449c |
M. gilvum PYR-GCK | Mflv_2646 | - | 5e-32 | 26.64% (488) | VWA containing CoxE family protein |
M. tuberculosis H37Rv | Rv2425c | - | 4e-32 | 27.47% (495) | hypothetical protein Rv2425c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1620 | - | 9e-31 | 26.18% (489) | hypothetical protein MAB_1620 |
M. marinum M | MMAR_3751 | - | 8e-32 | 27.59% (493) | hypothetical protein MMAR_3751 |
M. avium 104 | MAV_1749 | - | 4e-30 | 27.80% (500) | hypothetical protein MAV_1749 |
M. thermoresistible (build 8) | TH_0790 | - | 3e-31 | 27.31% (498) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3694 | - | 8e-33 | 27.79% (493) | hypothetical protein MUL_3694 |
M. vanbaalenii PYR-1 | Mvan_5477 | - | 1e-53 | 30.88% (502) | VWA containing CoxE family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb2449c|M.bovis_AF2122/97 MAARR-IRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMAT Rv2425c|M.tuberculosis_H37Rv MAARR-IRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMAT MMAR_3751|M.marinum_M MATRR-IRPSYPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMAA MUL_3694|M.ulcerans_Agy99 MATRR-IRPSYPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMAA MAV_1749|M.avium_104 MATRR-IRPSRPLAPHGLPGHLVGFVEALRGAGISVGPSETVDAGRVMAT Mflv_2646|M.gilvum_PYR-GCK MPPRR-TRPPQPPAPHGIPGHLVEFVEALRKQGIAVGPSETVDAGQVMAT TH_0790|M.thermoresistible__bu MAVRR-TRPPQPLAPHGIPGHLVEFIEALRAQGIYVGPSETVDAGRVVSV MAB_1620|M.abscessus_ATCC_1997 MPPRKPPKAVLPLAPHGLPGHLVGFVEALREQGISVGPSETVDAGRVMTV Mvan_5477|M.vanbaalenii_PYR-1 -----------------MEATLHRFVRLLRLGGVRVSIPEALDAMRCAGQ MSMEG_6240|M.smegmatis_MC2_155 -----------MTPSKILDLVAAAFGELLRRAGVATSPAEVIEVRRVLGL : * . ** *: .. .*.::. : Mb2449c|M.bovis_AF2122/97 LG-LGDREVLREGIACAVLRRPDHRDTYDAMFDLWFPAA----------- Rv2425c|M.tuberculosis_H37Rv LG-LGDREVLREGIACAVLRRPDHRDTYDAMFDLWFPAA----------- MMAR_3751|M.marinum_M LG-FEDREVLREGIACAVLRRPDHRDTYDAMFDLWFPAA----------- MUL_3694|M.ulcerans_Agy99 LG-FEDREVLREGIACAVLRRPDHRDTYDAMFDLWFPAA----------- MAV_1749|M.avium_104 LG-LGNREVLREGLACAVLRRPDHRETYDAMFDLWFPAA----------- Mflv_2646|M.gilvum_PYR-GCK LG-LSDRNVLREGLACAVLRRSDHRETYDALFDLYFPAA----------- TH_0790|M.thermoresistible__bu LG-LGDREVLREGIACAVLRRPDHRDTYDALFDLYFPAA----------- MAB_1620|M.abscessus_ATCC_1997 LG-LQSRSELREGLACAVLRRADHRPTFDVLFDLWFPPA----------- Mvan_5477|M.vanbaalenii_PYR-1 PGVLSSRAVLRTALRVALVKDQRDEPIFDEIFEAFFSLVRVGGDGHDAHA MSMEG_6240|M.smegmatis_MC2_155 LG-ARDQEALRAALRATCAKYVREQRGFDRAFDAMFGVASIVTEHDVADP * .: ** .: : : .. :* *: * . Mb2449c|M.bovis_AF2122/97 ----------LGARAVITTEDESAGSG--GLPPDDVEAMRQLLLDLLANN Rv2425c|M.tuberculosis_H37Rv ----------LGARAVITTEDESAGSG--GLPPDDVEAMRQLLLDLLANN MMAR_3751|M.marinum_M ----------LGARAVIT-EEQAGQSE--GLPPDDVEAMRQLLLDLLTDN MUL_3694|M.ulcerans_Agy99 ----------LGARAVIT-EEQAGQSE--GLPPDDVEAMRQMLLDLLTDN MAV_1749|M.avium_104 ----------LGARAVVTDEDAGPGSGEDALPPDDVEAMREMLLDLLTEN Mflv_2646|M.gilvum_PYR-GCK ----------LGAKTVLDDD---EDGE--GLPPEDIEALRSALVDLLADN TH_0790|M.thermoresistible__bu ----------LGARTVLDEDGEPTDDP--GLPAEDIEAMRAALLDLLADN MAB_1620|M.abscessus_ATCC_1997 ----------LGARFVEVGEE--------GIDIDDIEQVRDELVDLLASD Mvan_5477|M.vanbaalenii_PYR-1 HSHAHDDLVDTGELESFTLSEEPSETPEPGHEHGKPASIRDYFKQEDLAQ MSMEG_6240|M.smegmatis_MC2_155 SRAHTG----SGLPDHLEIDEDQEIGR-YAEYNERAAEVGDHFDTPDADK * . . : : . Mb2449c|M.bovis_AF2122/97 QDLAGKDERLVEMIARIVEAYGKYSS---SRGPSFSSYQALKAMALD--- Rv2425c|M.tuberculosis_H37Rv QDLAGKDERLVEMIARIVEAYGKYSS---SRGPSFSSYQALKAMALD--- MMAR_3751|M.marinum_M PDLADMDQRLVGMIARIVETYGKYNS---SRGPSFSSYQALKAMALD--- MUL_3694|M.ulcerans_Agy99 PDLADMDQRLVGMIARIVETYGKYNS---SQGPSFSSYQALKAMALD--- MAV_1749|M.avium_104 PDLADMDERLVAMIARIVEAYGKYSS---SRGPSFSSYQALKAMALD--- Mflv_2646|M.gilvum_PYR-GCK EELANIDERLAAMIAQIVEAYGRYNS---SRGPSYSSYQALKAMSLD--- TH_0790|M.thermoresistible__bu EELANLDERLAMMIAKIVEAYGRYNS---SRGPSYSSYQALKAMALD--- MAB_1620|M.abscessus_ATCC_1997 ---AG-DLPLNSLIAQIVEAYGKYNS---TRGTSYSAYQAMKSLSLD--- Mvan_5477|M.vanbaalenii_PYR-1 RYNLHQEANKIDLAALTDEIAFSKDS---RNGADDSYRIQLSTDRLGGAG MSMEG_6240|M.smegmatis_MC2_155 GFNPHKDDDDFSVSGADNQLSVSAESDAGRRGVRYTVEVDRAASSLAG-- : : . : .* .* : : * Mb2449c|M.bovis_AF2122/97 ---------------ELEGKLLAGLLAPYGDEP--TATQEQIAKALAAQK Rv2425c|M.tuberculosis_H37Rv ---------------ELEGKLLAGLLAPYGDEP--TATQEQIAKALAAQK MMAR_3751|M.marinum_M ---------------ELEGKLLAGLLAPYGDEP--TPTQEQIAKAIAAQR MUL_3694|M.ulcerans_Agy99 ---------------ELEGKLLAGLLAPYGDEL--TPTQEQIAKAIAAQR MAV_1749|M.avium_104 ---------------ELEGKLLAGLLAPYGDEP--TPTQEEIAKALAAQR Mflv_2646|M.gilvum_PYR-GCK ---------------DLEGRLLAGLLAPYGDEP--TPTQEQIAKAIAAQR TH_0790|M.thermoresistible__bu ---------------DLEGRLLAGLLAPYGDEP--TPSQEQIAKAIAAQR MAB_1620|M.abscessus_ATCC_1997 ---------------QIEAKLLTGLLGGGDEDSPVSPTDQAVAKAIAKER Mvan_5477|M.vanbaalenii_PYR-1 TAGDLATAAGTPVDAELTIAEQEALLGWLDDET--DYGGDEFDAAELRKR MSMEG_6240|M.smegmatis_MC2_155 ------------DLADSVAPVVAGALHWDDPES-ILAWLDAYDPARTYGD : . * . : : * Mb2449c|M.bovis_AF2122/97 IAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVEFLRASGEQLRQM Rv2425c|M.tuberculosis_H37Rv IAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVEFLRASGEQLRQM MMAR_3751|M.marinum_M VSQLRKMVDAETKRRTAEQLGRDHVQMYGIPQLSENVEFLRASGEQLRQM MUL_3694|M.ulcerans_Agy99 VSQLRKMVDAETKRRTAEQLGRDHVQMYGIPQLSENVEFLRASGEQLRQM MAV_1749|M.avium_104 ITQLRKLVDAETKRRTAEQLGRDHVQMYGIPQLSENVEFLRASGEQLRQM Mflv_2646|M.gilvum_PYR-GCK IAQLRKMVEGETKRRTAEQLGRDHVQMYGVPQLSENVEFLRASGEQLRQM TH_0790|M.thermoresistible__bu ILQLKQMVEAETKRRTAEQLGREHVQMYGVPQLAENVEFLRASGEQLRQM MAB_1620|M.abscessus_ATCC_1997 ISKVRQLVEAETKRRTAEQLGRERVTAYGVPQLAENVEFLRASGEQLRNM Mvan_5477|M.vanbaalenii_PYR-1 LAGVLENLPQALKRHLEALLALETKIVEGREQREARIDRIGE--RERAEL MSMEG_6240|M.smegmatis_MC2_155 DAGDQPLTAEQLDQLTQAVESFVAALADRCGLTAEPDTPAGPTDATVATD .: . Mb2449c|M.bovis_AF2122/97 RRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVLHK Rv2425c|M.tuberculosis_H37Rv RRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVLHK MMAR_3751|M.marinum_M RRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDVVLRK MUL_3694|M.ulcerans_Agy99 RRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDVVLRK MAV_1749|M.avium_104 QRVVAPLARTLATRLAARRRRSRAGTIDLRKTLRKSMSTGGVPIDVVLAK Mflv_2646|M.gilvum_PYR-GCK RRVVGPLARTLATRLAARRRRSRAGEIDLRKTLRKSMSTGGVPIDVVLKK TH_0790|M.thermoresistible__bu QRVVAPLARMLATRLAARRRRARAGEIDLRKTLRRSMSTGGVPIDLVLKK MAB_1620|M.abscessus_ATCC_1997 RRVVHPLARMLASRLAARRRRAHTGQIDLRRTLRKSMSTGGVPIDVVQKK Mvan_5477|M.vanbaalenii_PYR-1 EDSLRRLARTLHGALTHRRRTAAAGRVDSGQTMRRNMRFDGVPFMPVTVR MSMEG_6240|M.smegmatis_MC2_155 VDLACHEVLRRMRGAPRPRPAEMRGRLDMRRTTRHSLRTDGVPFRLITRT . . * * :* :* *:.: .***: : Mb2449c|M.bovis_AF2122/97 PRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDSTDE Rv2425c|M.tuberculosis_H37Rv PRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDSTDE MMAR_3751|M.marinum_M PRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDTTDE MUL_3694|M.ulcerans_Agy99 PRPARPELVVLCDVSGSVAGFSHFTLLLVHALRRQFSRVRVFAFIDTTDE MAV_1749|M.avium_104 PRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDTTDE Mflv_2646|M.gilvum_PYR-GCK PHPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDTTDE TH_0790|M.thermoresistible__bu PHPARPELAVLCDVSGSVAGFSHFTLMLVHALRQQFSRVRVFAFIDTTDE MAB_1620|M.abscessus_ATCC_1997 PRPARPELVVLCDVSGSVAGFSHFTLLLVNALRQQFSRVRVFAFIDTTDE Mvan_5477|M.vanbaalenii_PYR-1 RAEDRPRLVVLADVSLSVRATSRFTLNLVHGLQDLFTQVRSFVFVADVAE MSMEG_6240|M.smegmatis_MC2_155 PRPDRVRLLVIADVSLSVRPVTAFTLRLAQAMHRRAHRCRVMAFVDRPVD * .* *:.*** ** : *** *.:.:: : * :.*: : Mb2449c|M.bovis_AF2122/97 VTHMFGPESDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVLSP Rv2425c|M.tuberculosis_H37Rv VTHMFGPESDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVLSP MMAR_3751|M.marinum_M VTHMFGPDADLAVAIQRITREAGVYSRDGHSDYGNAFVSFMQGFPNVLSP MUL_3694|M.ulcerans_Agy99 VTHMFGPDADLAVAIQRITREAGVYSRDGHSDYGNAFVSFMQGFPNVLSP MAV_1749|M.avium_104 VTHMFGPEADLAVAIQRITREAGVYSRDGHSDYGNAFASFEQKFPNVLSP Mflv_2646|M.gilvum_PYR-GCK VTELFGPDSDLAVAVQRITREAAVFTRDGHSDYGHAFVSFLDKFPNVLSP TH_0790|M.thermoresistible__bu VTDLFGPDADLAVAVQRITREAEVFTRDGHSDYGHAFVSFLDKYPNALSP MAB_1620|M.abscessus_ATCC_1997 VTHLFTPDTDLAEAIVRITREAQVFTGDGHSDYGHAFKTFVEKFPTVLSP Mvan_5477|M.vanbaalenii_PYR-1 TTELFRDHP--SEKALGLIFGGDVVDLAANSDYGTVFGEFVAEHSSALTR MSMEG_6240|M.smegmatis_MC2_155 VTEILLQTG--GDDALAAVLAEAQIDLEASSDYGQVFDEMLSAQAEALDS .*.:: . . **** .* : . .* Mb2449c|M.bovis_AF2122/97 RSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPKHLWGSGDSAV Rv2425c|M.tuberculosis_H37Rv RSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPKHLWGSGDSAV MMAR_3751|M.marinum_M RSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPQHLWGSGDSAV MUL_3694|M.ulcerans_Agy99 RSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPQHLWGSGDSAV MAV_1749|M.avium_104 RTSLLVLGDGRTNYRNPEVELLSHMVTASRHAHWLNPEPKHLWGSGDSAV Mflv_2646|M.gilvum_PYR-GCK RSSLLVLGDGRNNYRNPETDLLAHMVNAARHAHWLNPEPKHLWGSGDSAV TH_0790|M.thermoresistible__bu RSSLLILGDGRNNYRNPELELLERMVDASRHAHWLNPEPRHLWGSGDSAV MAB_1620|M.abscessus_ATCC_1997 RSALLILGDGRTNYRNPAVEVLSSMVSSSRHAHWLNPEPKNHWGTGDSAA Mvan_5477|M.vanbaalenii_PYR-1 RTTVLVLGDGRTNAKDPNLAAFEEITRRARETVWLTPEPRYSWGLGSCEL MSMEG_6240|M.smegmatis_MC2_155 RTAVLIVGDGRSPGLPPRTDSLRALRRRVHRLAWITPEPTRYWRQATCAM *:::*::****. * : : :. *:.*** * . . Mb2449c|M.bovis_AF2122/97 PRYQEVIT-MHECRSAKQLATVIDQLLPV---- Rv2425c|M.tuberculosis_H37Rv PRYQEVIT-MHECRSAKQLATVIDQLLPV---- MMAR_3751|M.marinum_M PRYQEVIA-MHECRSAKQLATVIDELLPV---- MUL_3694|M.ulcerans_Agy99 PRYQEVIA-MHECRSAKQLATVIDELLPV---- MAV_1749|M.avium_104 PRYQQVIP-MHECRSAKQLAAVIDQLLPV---- Mflv_2646|M.gilvum_PYR-GCK PRYQDVIT-MHECRSAKQLASVIDALLPV---- TH_0790|M.thermoresistible__bu PRYSEVIT-MHECRSAKQLAAVIDQLLPV---- MAB_1620|M.abscessus_ATCC_1997 KRYQDAIT-MHECRSAKQLAAVIDNLLPV---- Mvan_5477|M.vanbaalenii_PYR-1 PAYAEFCDRVRVVRDLTGLESAAHDFAAEAVGR MSMEG_6240|M.smegmatis_MC2_155 PDYAEVCDKVVVARDAEQLIARAGELAHALS-- * : : *. * : :