For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0555 (-)

annotation: ABC transporter permease protein
coordinates: 632137 - 632928
length: 263

MKARAALVFAVLVALMPVGYLVSLALRPAEDVLNSSLFPTSLTLSNFVKVFDTIELGTMLQNSWVAAVGG
ALLAVLIAAPAAYFTARHTRGERLLTVLLASYCAPPIVAIIPLFFLLRHVGLTNNLAGLILVNGIANVPV
AVWLLDGFVRRIPIEIDEAAVIDGLSVAAAFRKIILPLLWPGIVAALLVAFFLSYNDFLFAVYLAVTKES
QTLTVGLSLFQGDRNVQFGQQAAAGLLGLAPVYVLALAAQRHLVGGLTTGATK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0555--100% (263)ABC transporter permease protein
M. smegmatis MC2 155MSMEG_5059-6e-3734.62% (260) ABC transporter, permease protein SugB
M. smegmatis MC2 155MSMEG_3268-2e-3431.73% (271) ABC transporter, permease protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1269sugB3e-3635.79% (271) sugar-transport integral membrane protein ABC transporter
M. gilvum PYR-GCKMflv_3853-7e-3733.59% (262) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv1237sugB3e-3635.79% (271) sugar-transport integral membrane protein ABC transporter
M. leprae Br4923MLBr_01088-1e-3736.78% (261) putative ABC-transport protein, inner membrane component
M. abscessus ATCC 19977MAB_1374-6e-3534.35% (262) sugar ABC transporter, permease protein SugB
M. marinum MMMAR_4204sugB1e-3838.13% (257) sugar-transport integral membrane protein ABC transporter
M. avium 104MAV_1376sugB4e-3737.07% (259) ABC transporter, permease protein SugB
M. thermoresistible (build 8)TH_2867-1e-3434.98% (263) PUTATIVE binding-protein-dependent transport systems inner
M. ulcerans Agy99MUL_4511sugB3e-3235.77% (246) sugar-transport integral membrane protein ABC transporter
M. vanbaalenii PYR-1Mvan_2542-3e-3734.35% (262) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_4204|M.marinum_M               -----------MTTGSGRRTFWVVIDTMVVVYALLPVLWILSLSLKPTST
MUL_4511|M.ulcerans_Agy99           ----------------------------------------MSLSPKPTST
Mb1269|M.bovis_AF2122/97            -------------MGARRATYWAVLDTLVVGYALLPVLWIFSLSLKPTST
Rv1237|M.tuberculosis_H37Rv         -------------MGARRATYWAVLDTLVVGYALLPVLWIFSLSLKPTST
MLBr_01088|M.leprae_Br4923          MGIEKVKVTAGVRVGARRATIWVIIDTFVVGYALLPVLWILSLSLKPAST
MAV_1376|M.avium_104                -----------------------MIDTLVVVYALLPVLWIFSLSLKPTST
TH_2867|M.thermoresistible__bu      ---------VNERVTARRATGWIVIDLLVILYALFPVLWILSLSLKSTAT
MAB_1374|M.abscessus_ATCC_1997      ----------MSRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSS
Mflv_3853|M.gilvum_PYR-GCK          --------------MTKNTKWWTIAGIVIVIYSFVPMLWMISLAFKPPSD
Mvan_2542|M.vanbaalenii_PYR-1       --------------MTKNTKWWTIAGIVIVIYSFVPMLWMISLAFKPPSD
MSMEG_0555|M.smegmatis_MC2_155      -------------------MKARAALVFAVLVALMPVGYLVSLALRPAED
                                                                            .**: :..  

MMAR_4204|M.marinum_M               VKDGR--LIPSSVTLDNYRGVFGG---DLFSSALINSIGIGLTTTVIAVL
MUL_4511|M.ulcerans_Agy99           VKDGR--LIPSSVTLDNYRGVFGG---DLFSSALINSIGIGLTTTVIAVL
Mb1269|M.bovis_AF2122/97            VKDGK--LIPSTVTFDNYRGIFRG---DLFSSALINSIGIGLITTVIAVV
Rv1237|M.tuberculosis_H37Rv         VKDGK--LIPSTVTFDNYRGIFRG---DLFSSALINSIGIGLITTVIAVV
MLBr_01088|M.leprae_Br4923          VKDGK--LIPSLVTFDNYRGIFRS---DLFSSALINSIGIGLTTTVIAVM
MAV_1376|M.avium_104                VKDGK--LIPSAISLENYRGIFRG---DFFSSALINSVGIGLITTAVAVL
TH_2867|M.thermoresistible__bu      VKDGK--LIPDEITFDNYKAIFRGGGSGVFTSALINSIGIGLITTVIAVV
MAB_1374|M.abscessus_ATCC_1997      VKDGK--FFPWPITLDNYRGIFSG---NVFTSALVNSIGIGLIATVIAVS
Mflv_3853|M.gilvum_PYR-GCK          IVSGEPSFLPSTVTFDNFAQIFSN---PLFTRALINSIGIALVATVISVI
Mvan_2542|M.vanbaalenii_PYR-1       IVSGKPSFLPSSITFDNFAQIFSQ---PLFTRALINSIGIAVIATVISVI
MSMEG_0555|M.smegmatis_MC2_155      VLNSS--LFPTSLTLSNFVKVFDT---IELGTMLQNSWVAAVGGALLAVL
                                    : ..   ::*  :::.*:  :*       :   * **   .:  : ::* 

MMAR_4204|M.marinum_M               LGAMAAYAVARLDFPGKRLLVGVALLITMFPAISLVTPLFNIERRIGLFD
MUL_4511|M.ulcerans_Agy99           LGAMAACAVARLDFPGKRLLVGVTLLITMFPAISLVTPLFNIERRIGLFD
Mb1269|M.bovis_AF2122/97            LGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERAIGLFD
Rv1237|M.tuberculosis_H37Rv         LGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERAIGLFD
MLBr_01088|M.leprae_Br4923          FGAMAAYAIARLAFPGKRLLVGTTLLVTMFPAISLVTPLFNIERRVGLFD
MAV_1376|M.avium_104                LGAMAAYAVARLDFPGKRLLIGATLLITMFPAISLVTPLFNIERFLGLFD
TH_2867|M.thermoresistible__bu      VGGMAAYAVARLNFPGKRLLIGVALLIAMFPQISLVTPLFNIERQLGLFD
MAB_1374|M.abscessus_ATCC_1997      VGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERSVGLFD
Mflv_3853|M.gilvum_PYR-GCK          IAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRGLGIYD
Mvan_2542|M.vanbaalenii_PYR-1       IAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRGLGIYD
MSMEG_0555|M.smegmatis_MC2_155      IAAPAAYFTARHTRGER--LLTVLLASYCAPPIVAIIPLFFLLRHVGLTN
                                    ..  **   **     :  *:   *     *    : *:* : * :*: :

MMAR_4204|M.marinum_M               TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAQMDGATPYQAFRKV
MUL_4511|M.ulcerans_Agy99           TWPELILPYITFALPLAIYTLSAFFREIPWDLEKAAQMDGATPYQAFRKV
Mb1269|M.bovis_AF2122/97            TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKV
Rv1237|M.tuberculosis_H37Rv         TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKV
MLBr_01088|M.leprae_Br4923          TWAGLILPYITFALPLAIYTLSAFFAEIPWDLEKAAKMDGATSGQAFRKV
MAV_1376|M.avium_104                TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKIDGATPAQAFRKV
TH_2867|M.thermoresistible__bu      TWAGLIIPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKV
MAB_1374|M.abscessus_ATCC_1997      TWPGLIIPYITFALPLAIYTLSAFFREIPWELEKAAKMDGATPAQAFWKV
Mflv_3853|M.gilvum_PYR-GCK          TWLGLIIPYLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQAFRKV
Mvan_2542|M.vanbaalenii_PYR-1       TWLGLIIPYLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQAFRKV
MSMEG_0555|M.smegmatis_MC2_155      NLAGLILVNGIANVPVAVWLLDGFVRRIPIEIDEAAVIDGLSVAAAFRKI
                                    .   **:      :*:::: :..*. .** :::.** :** :   ** *:

MMAR_4204|M.marinum_M               IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKASITAPVAIANFAGSS
MUL_4511|M.ulcerans_Agy99           IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKASITAPIAIANFAGSS
Mb1269|M.bovis_AF2122/97            IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSS
Rv1237|M.tuberculosis_H37Rv         IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSS
MLBr_01088|M.leprae_Br4923          IVPLAAPGLVTAAILVFIFAWNDLLLALSLTSTKAAITAPVAITNFTGSS
MAV_1376|M.avium_104                IVPLAAPGVVTAAILVFIFAWNDLLLALTLTATKAAITAPVAIVSFSGSS
TH_2867|M.thermoresistible__bu      IAPLAAPGIVTAAILVFIFAWNDLLLALSLTATERAITAPVAIANFTGSS
MAB_1374|M.abscessus_ATCC_1997      IAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSS
Mflv_3853|M.gilvum_PYR-GCK          IVPLAAPGVFTTAILTFFFCWNDFLFAISLTSTDSARTVPAALAFFQGAS
Mvan_2542|M.vanbaalenii_PYR-1       IVPLAAPGVFTTAILTFFFCWNDFLFAISLTSTDSARTVPAALAFFQGAS
MSMEG_0555|M.smegmatis_MC2_155      ILPLLWPGIVAALLVAFFLSYNDFLFAVYLAVTKESQTLTVGLSLFQGDR
                                    * **  **:.:: ::.*::.:**:*:*: *: *. : * . .:  * *  

MMAR_4204|M.marinum_M               QFEEPTGSIAAGAMVITVPIIVFVLIFQRRIVAGLTSGAVKG
MUL_4511|M.ulcerans_Agy99           QFEEPTGSIAAGAMVITVPIIVFVLIFQLRIVAGLTSGAVKG
Mb1269|M.bovis_AF2122/97            QFEEPTGSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVKG
Rv1237|M.tuberculosis_H37Rv         QFEEPTGSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVKG
MLBr_01088|M.leprae_Br4923          QFEEPTGSIAAGAIVITAPIIVFVWIFQRRIVAGLTSGAVKG
MAV_1376|M.avium_104                QFEEPTGSIAAGAVVITVPVILFVLIFQRRIVAGLTSGAVKG
TH_2867|M.thermoresistible__bu      QFEEPTGSIAAGAMVITIPIIVFVLIFQRRIVSGLTSGAVKG
MAB_1374|M.abscessus_ATCC_1997      QFEEPTGSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG
Mflv_3853|M.gilvum_PYR-GCK          YFESPVPYIMAASVIVTIPVVILVLVFQRRIVAGLTSGAVKG
Mvan_2542|M.vanbaalenii_PYR-1       YFESPVPYIMAASVIVTIPVVILVLIFQRRIVAGLTSGAVKG
MSMEG_0555|M.smegmatis_MC2_155      --NVQFGQQAAAGLLGLAPVYVLALAAQRHLVGGLTTGATK-
                                      :       *..::   *: ::.   * ::*.***:**.*