For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ASDLFSQVVNSGPGSFLAKQLGVPQPETLRRYRPGDPPLAGSLLIGGSGRVAEPLRTALADDYNLVSNNI GGRWADSFGGVVFDATGITEAEGLKELYTFFTPLLRNLAPCARVVVVGTTPAEAGSVHAQVVQRALEGFT RSLGKELRRGATVSLVYLSADAKPGATGLESTMRFILSAKSAYVDGQVFRVGAADSTPPADWDKPLDGKV AVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHH GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVA ELIAYFASPASNAVTGNTIRVCGQAMLGA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0372 | fabG | - | 100% (450) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. smegmatis MC2 155 | MSMEG_2206 | fabG | 1e-37 | 37.60% (242) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. smegmatis MC2 155 | MSMEG_5903 | fabG | 4e-32 | 37.69% (268) | 3-ketoacyl-(acyl-carrier-protein) reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0248c | fabG | 0.0 | 83.52% (449) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. gilvum PYR-GCK | Mflv_0412 | fabG | 0.0 | 82.12% (453) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. tuberculosis H37Rv | Rv0242c | fabG | 0.0 | 83.52% (449) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. leprae Br4923 | MLBr_02565 | fabG | 0.0 | 79.29% (449) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. abscessus ATCC 19977 | MAB_4443 | fabG | 0.0 | 75.11% (450) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. marinum M | MMAR_0503 | fabG | 0.0 | 81.78% (450) | 3-oxoacyl- |
M. avium 104 | MAV_4916 | fabG | 0.0 | 84.44% (450) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. thermoresistible (build 8) | TH_4166 | - | 0.0 | 82.34% (453) | PUTATIVE oxidoreductase, short chain dehydrogenase/reductase |
M. ulcerans Agy99 | MUL_1166 | fabG | 0.0 | 81.56% (450) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. vanbaalenii PYR-1 | Mvan_0259 | fabG | 0.0 | 81.10% (455) | 3-ketoacyl-(acyl-carrier-protein) reductase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0412|M.gilvum_PYR-GCK MRQCWVTPAPTPQQMYPDPAKGSTVASDLLSQVVNSGPGSFLAKQLGVPQ Mvan_0259|M.vanbaalenii_PYR-1 MDATVLGNPITVDNDVPRSSKGSAVASDLLSQVVNSGPGSFLAKQLGVPQ TH_4166|M.thermoresistible__bu ------------------------MATDLYSQIVHSTPGSFLARQLGIPQ MSMEG_0372|M.smegmatis_MC2_155 ------------------------MASDLFSQVVNSGPGSFLAKQLGVPQ MLBr_02565|M.leprae_Br4923 --------------------MAPKCSSDLFSQIVSSGPGSFVAKQLGVPR MAV_4916|M.avium_104 --------------------MAPKVSSDLFSQIVNSGPGSFLAKQLGVPQ Mb0248c|M.bovis_AF2122/97 --------------------MAPKRSSDLFSQVVNSGPGSFLARQLGVPQ Rv0242c|M.tuberculosis_H37Rv --------------------MAPKRSSDLFSQVVNSGPGSFLARQLGVPQ MMAR_0503|M.marinum_M --------------------MAPKLSSDLFSQVVNSGPGTFVAKQLGVPQ MUL_1166|M.ulcerans_Agy99 --------------------MAPRLSSDLFSQVVNSGPGTFVAKQLGVPQ MAB_4443|M.abscessus_ATCC_1997 --------------------MSPKLTDDLYALLVNSGPGNLLAGRLGIPQ : ** : :* * **.::* :**:*: Mflv_0412|M.gilvum_PYR-GCK PEPLRRYKQGEPPLVGSLLIGGE-----GRVVEPLRAALADDYDVVANNL Mvan_0259|M.vanbaalenii_PYR-1 PEPLRRYKQGEPPLAGSLLIGGSGAAGGGRVVEPLRAALADDYDVVANNL TH_4166|M.thermoresistible__bu PEPLRRYRPGEPPLAGSLLIGGD-----GRVVEPLRTALADDYQLVGNNL MSMEG_0372|M.smegmatis_MC2_155 PETLRRYRPGDPPLAGSLLIGGS-----GRVAEPLRTALADDYNLVSNNI MLBr_02565|M.leprae_Br4923 PETLRRYRPSDAPLCGSLLIGGD-----GRLVEPLRATLEKDYDLVSNNL MAV_4916|M.avium_104 PETLRRYRPGDPPLAGSLLIGGE-----GRVVEPLRAALAKDYDLVGNNL Mb0248c|M.bovis_AF2122/97 PETLRRYRAGEPPLTGSLLIGGA-----GRVVEPLRAALEKDYDLVGNNL Rv0242c|M.tuberculosis_H37Rv PETLRRYRAGEPPLTGSLLIGGA-----GRVVEPLRAALEKDYDLVGNNL MMAR_0503|M.marinum_M AETLRRYRPGDPPLAGSLLIGGE-----GRVAEPLRAALAKDYDQVSNNL MUL_1166|M.ulcerans_Agy99 AETLRRYRPGDPPLAGSLLIGGE-----GRVAEPLRAALAKDYDQVSNNL MAB_4443|M.abscessus_ATCC_1997 PEKLRRYKKGQPALAGPVLIGGE-----GRLAEPLRAALADDYEVVSNNL .* ****: .:..* *.:**** **:.****::* .**: *.**: Mflv_0412|M.gilvum_PYR-GCK GGRWADSFGGLVYDATGITEPEGLKGLKGLYEFFTPLLRNLGHSGRVVVI Mvan_0259|M.vanbaalenii_PYR-1 GGRWADSFGGLVYDATAITEPE---GLKGLYQFFTPLMRNLGHSGRVVVI TH_4166|M.thermoresistible__bu GGRWADKFGGLLFDATGITEPA---GLKALYEFFTPLLRNVGPCARIAVV MSMEG_0372|M.smegmatis_MC2_155 GGRWADSFGGVVFDATGITEAE---GLKELYTFFTPLLRNLAPCARVVVV MLBr_02565|M.leprae_Br4923 GGRWTDSFGGLVFDATGITAPA---ELKGLHNFFTPLLRNLGRCARVVVI MAV_4916|M.avium_104 GGRWADRFGGLVFDATGITTPE---GLKGLYEFFTPLLRNLGHCARVVVV Mb0248c|M.bovis_AF2122/97 GGRWADSFGGLVFDATGITEPA---GLKGLHEFFTPVLRNLGRCGRVVVV Rv0242c|M.tuberculosis_H37Rv GGRWADSFGGLVFDATGITEPA---GLKGLHEFFTPVLRNLGRCGRVVVV MMAR_0503|M.marinum_M GGRWADSFGGLVFDATGITDPA---GLKGLHDFFKPVLRNLGASARVVVV MUL_1166|M.ulcerans_Agy99 GGRWADSFGGLVFDATGITDPA---GLKGLHDFFKPVLRNLGASARVVVV MAB_4443|M.abscessus_ATCC_1997 GGRWADKFGALVFDATGITTPV---ELKALHEFFTPLLRNVGKSGRLLVI ****:* **.:::***.** . ** *: **.*::**:. ..*: *: Mflv_0412|M.gilvum_PYR-GCK GTTPEETGSIHERTVQRALEGFTRSLAKELRNGSTASLVYLSADAKPAAT Mvan_0259|M.vanbaalenii_PYR-1 GTTPEETGSVHERTAQRALEGFTRSLAKELRNGSTASLVYLSPDAKPAAT TH_4166|M.thermoresistible__bu GTTPEETGSVNERIAQRALEGFTRSLAKEMRRGATVNLVYLSPEAKPAAT MSMEG_0372|M.smegmatis_MC2_155 GTTPAEAGSVHAQVVQRALEGFTRSLGKELRRGATVSLVYLSADAKPGAT MLBr_02565|M.leprae_Br4923 GTTPDATTSTDERIAQRALEGFSRSLGKELRRGATVALVYLSPDAKPAAT MAV_4916|M.avium_104 GTTPDAAAGTHERIAQRALEGFTRSLGKELRNGSTVALVYLSPAAKPAAT Mb0248c|M.bovis_AF2122/97 GGTPEAAASTNERIAQRALEGFTRSLGKELRRGATTALVYLSPDAKPAAT Rv0242c|M.tuberculosis_H37Rv GGTPEAAASTNERIAQRALEGFTRSLGKELRRGATTALVYLSPDAKPAAT MMAR_0503|M.marinum_M GTTPDAIDNSHERIAQRALEGFTRSLAKELRRGSTAALVYLSPEAKPAAT MUL_1166|M.ulcerans_Agy99 GTTPDAIDNSHERIAQRALEGFTRSLAKELRRASTAALVYLSPEAKPAAT MAB_4443|M.abscessus_ATCC_1997 GTTPDKAATTDERIAQRALEGFTRSLAKEFSNGATVQLVYLHPDAKTGAT * ** . : .*******:***.**: ..:*. **** . **..** Mflv_0412|M.gilvum_PYR-GCK GLESTLRFLLSGKSAYVDGQVFHIGAADATPPADWDKPLDGKVAVVTGAA Mvan_0259|M.vanbaalenii_PYR-1 GLESTLRFLLSGKSAYVDGQVFRVGAADATPPADWDRPLEGKVAVVTGAA TH_4166|M.thermoresistible__bu GLESTIRFIMSAKSAYVDGQVFRVGPADSVPPADWDKPLDGKVAVVTGAA MSMEG_0372|M.smegmatis_MC2_155 GLESTMRFILSAKSAYVDGQVFRVGAADSTPPADWDKPLDGKVAVVTGAA MLBr_02565|M.leprae_Br4923 GLESTMRFILSAKSAYVNGQVFYVGAADSTPPTNWDRPLENKVAIVTGAA MAV_4916|M.avium_104 GLESTMRFILSAKSAYVDGQVFYVGEADSTPPADWERPLDGKVAIVTGAA Mb0248c|M.bovis_AF2122/97 GLESTMRFLLSAKSAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAA Rv0242c|M.tuberculosis_H37Rv GLESTMRFLLSAKSAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAA MMAR_0503|M.marinum_M GLESTVRFILSAKSAYVDGQVFYVGAADSTPPADWDRPLEGKVAIVTGAA MUL_1166|M.ulcerans_Agy99 GLESTVRFILSAKSAYVDGQVFYVGAADSTPPADWDRPLEGKVAIVTGAA MAB_4443|M.abscessus_ATCC_1997 GLESTVRFILSAKSTYVDGQVFYVGADDSTAPADWDKPLAGKVAIVTGAA *****:**::*.**:**:**** :* *:..*::*::** .***:***** Mflv_0412|M.gilvum_PYR-GCK RGIGATIAQVFARDGAKVIAVDV---EGAVEALTETATKVGGTALTLDVT Mvan_0259|M.vanbaalenii_PYR-1 RGIGATIAEVFARDGAKVIAVDV---EGAAEALAETATKVGGTALTLDVT TH_4166|M.thermoresistible__bu RGIGATIAEVFARDGARVVAVDIGDAAGANDALAETAAKVNGTALVLDVT MSMEG_0372|M.smegmatis_MC2_155 RGIGATIAEVFARDGATVVAIDV---DGAAEDLKRVADKVGGTALTLDVT MLBr_02565|M.leprae_Br4923 RGIGAAIAEVVARDGARVVAIDV---ESAAEALDETANRVGGTTLSLDVT MAV_4916|M.avium_104 RGIGATIAEVFARDGARVVAIDV---ESAAETLAETASRVGGTALWLDVT Mb0248c|M.bovis_AF2122/97 RGIGATIAEVFARDGAHVVAIDV---ESAAENLAETASKVGGTALWLDVT Rv0242c|M.tuberculosis_H37Rv RGIGATIAEVFARDGAHVVAIDV---ESAAENLAETASKVGGTALWLDVT MMAR_0503|M.marinum_M RGIGQTIAEVFARDGASVVAIDV---ESAADALAETAASVGGTPLWLDVT MUL_1166|M.ulcerans_Agy99 RGIGQTIAEVFARDGASVVAIDV---ESAADALAETAASVGGTPLWLDVT MAB_4443|M.abscessus_ATCC_1997 RGIGETIAEVFARDGAAVVAIDM-----PSEELNELASRVGGTALALDVT **** :**:*.***** *:*:*: . : * . * *.**.* **** Mflv_0412|M.gilvum_PYR-GCK AADAVDRITEHVREHYDGTLDILVNNAGITRDKLLANMDESRWDSVIAVN Mvan_0259|M.vanbaalenii_PYR-1 AADAVDRIAEHVREHYEGRLDILVNNAGITRDKLLANMDEARWDSVLAVN TH_4166|M.thermoresistible__bu ADDAVDRITEHVREHYDGKVDILVNNAGITRDKLLVNMTEDRWDAVIAVN MSMEG_0372|M.smegmatis_MC2_155 ADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVN MLBr_02565|M.leprae_Br4923 ADDAVDKITEHLHDYQGGHADILVNNAGITRDKLLANMDDCRWDAVLEVN MAV_4916|M.avium_104 APDAVDKITEHLREHHGGHADILVNNAGITRDKLLANMDDARWDAVLAVN Mb0248c|M.bovis_AF2122/97 ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN Rv0242c|M.tuberculosis_H37Rv ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVN MMAR_0503|M.marinum_M ADDAVDKITEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDSVIAVN MUL_1166|M.ulcerans_Agy99 ADDAVDKITEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDSVIAVN MAB_4443|M.abscessus_ATCC_1997 SEDAVDTITAHLKEHHGGKADILVNNAGITRDKLLKNMDDARWDSVIAVN : **** *: *: :: * *************** ** : ***:*: ** Mflv_0412|M.gilvum_PYR-GCK LLAPLRLAEELVGSGLIGDGGRIVGLSSMAGIAGNRGQTNYAATKAGMIG Mvan_0259|M.vanbaalenii_PYR-1 LLAPLRLAEGLVASGLIGDGGRIIGLSSMAGIAGNRGQTNYAATKAGMIG TH_4166|M.thermoresistible__bu LLAPQRLTEGLFGNGTLAEGGRVVGLSSMAGIAGNRGQTNYAATKAGMIG MSMEG_0372|M.smegmatis_MC2_155 LLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIG MLBr_02565|M.leprae_Br4923 LLAPQRLTEGLVGNGSISKGGRVIVLSSMAGIAGNRGQTNYATAKAGVIG MAV_4916|M.avium_104 LLAPLRLTEGLVGNGSIGEGGRIVGLSSMAGIAGNRGQTNYATTKAGMIG Mb0248c|M.bovis_AF2122/97 LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIG Rv0242c|M.tuberculosis_H37Rv LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIG MMAR_0503|M.marinum_M LLAPLRLTEGLVGNGSIGAGGRVIGLSSIAGIAGNRGQTNYGATKAGMIG MUL_1166|M.ulcerans_Agy99 LLAPLRLTEGLVGNGSIGAGGRVIGLSSIAGIAGNRGQTNYGATKAGMIG MAB_4443|M.abscessus_ATCC_1997 LLAPQRLTEGLIGNGTIGEGGRVIGLASIAGIAGNRGQTNYGATKAGMIG **** **:* *...* :. ***:: *:*:************.::***:** Mflv_0412|M.gilvum_PYR-GCK LTDALAPQFAEKNITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGG Mvan_0259|M.vanbaalenii_PYR-1 LTDALAPQFAEKNITINAVAPGFIETKMTDAIPFATREVGRRLNSLFQGG TH_4166|M.thermoresistible__bu LTDALAPVLAEKNITINAVAPGFIETKMTEAIPFATREVGRRLNSLYQGG MSMEG_0372|M.smegmatis_MC2_155 LAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGG MLBr_02565|M.leprae_Br4923 LTQALAPGLAEKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGG MAV_4916|M.avium_104 LTQALAPELYDKGITINAVAPGFIETQMTAAIPLATREVGRRMNSLLQGG Mb0248c|M.bovis_AF2122/97 ITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGG Rv0242c|M.tuberculosis_H37Rv ITQALAPGLAAKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGG MMAR_0503|M.marinum_M IAQALAPSLAEKDITINAVAPGFIETKMTAAIPLATREVGRRLNSLLQGG MUL_1166|M.ulcerans_Agy99 IAQALAPSLAEKDITINAVAPGFIETKMTAAIPLATREVGRRLNSLLQGG MAB_4443|M.abscessus_ATCC_1997 ITQALAPSLAEKGITINAVAPGFIETKMTAAIPLANREVGRRINSLNQGG :::**** : *.*************:** ***:*.******:*** *** Mflv_0412|M.gilvum_PYR-GCK QPVDVAEAIAFFASPASNAVTGNTIRVCGQAMLGA Mvan_0259|M.vanbaalenii_PYR-1 QPVDVAEAIAYFASPGSNAVSGNTIRVCGQAMLGA TH_4166|M.thermoresistible__bu QPVDVAETIAYFANPASNAVTGNTIRVCGQAMLGA MSMEG_0372|M.smegmatis_MC2_155 QPVDVAELIAYFASPASNAVTGNTIRVCGQAMLGA MLBr_02565|M.leprae_Br4923 LPVDVAETIAYFAIPASNAVTGNVIRVCGQAMLGA MAV_4916|M.avium_104 QPVDVAETIAYFASPASNAVTGNVIRVCGQAMLGA Mb0248c|M.bovis_AF2122/97 QPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA Rv0242c|M.tuberculosis_H37Rv QPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA MMAR_0503|M.marinum_M QPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA MUL_1166|M.ulcerans_Agy99 QPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA MAB_4443|M.abscessus_ATCC_1997 EPVDVAETIAYFASPASNAVTGNVVRVCGQSWLGA ****** **:** *.****:**.:*****: :**