For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGDGSPYDPEYDDDHDSLAALDFPGTDDEPESSLDVFDVFDVGAPADEPWDAATSADGDGEDETPAPVFT VTNPPGTVTVAAYLDGRVHQIALSPKVVNMTERELADEIRVIADLAGEQARSAQYSFMLEGMREHGHDDA ATRDFLTRDLNLPTPEQADANQAQVFSTRYGGDHG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0058 | - | - | 100% (175) | hypothetical protein MSMEG_0058 |
M. smegmatis MC2 155 | MSMEG_5709 | - | 3e-23 | 38.15% (173) | hypothetical protein MSMEG_5709 |
M. smegmatis MC2 155 | MSMEG_0080 | - | 6e-23 | 36.31% (179) | hypothetical protein MSMEG_0080 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3897 | - | 1e-31 | 43.27% (171) | hypothetical protein Mb3897 |
M. gilvum PYR-GCK | Mflv_0774 | - | 3e-41 | 55.36% (168) | hypothetical protein Mflv_0774 |
M. tuberculosis H37Rv | Rv3867 | - | 1e-31 | 43.27% (171) | hypothetical protein Rv3867 |
M. leprae Br4923 | MLBr_00407 | - | 2e-23 | 37.57% (173) | hypothetical protein MLBr_00407 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5432 | - | 9e-30 | 43.03% (165) | hypothetical protein MMAR_5432 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2234 | - | 2e-26 | 39.66% (179) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4592 | - | 7e-28 | 43.75% (160) | hypothetical protein MUL_4592 |
M. vanbaalenii PYR-1 | Mvan_0071 | - | 1e-45 | 59.38% (160) | hypothetical protein Mvan_0071 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0774|M.gilvum_PYR-GCK --------------MR--------KAHDTVEYDEDGDHYDLAALDLG-SQ Mvan_0071|M.vanbaalenii_PYR-1 --------------MANPPPGFEASGFDASGFHDGGDHDDLAALDFS-IA MSMEG_0058|M.smegmatis_MC2_155 --------------MG------DGSPYDP-EYDD--DHDSLAALDFP-GT MMAR_5432|M.marinum_M ---------------------------MTDQPGYD-AHNYLAGLGFSGPA MUL_4592|M.ulcerans_Agy99 ----------------------------MVQPRSN-AHSNLDALKFSRTA Mb3897|M.bovis_AF2122/97 ---------------------------MVDPPGNDDDHGDLDALDFS-AA Rv3867|M.tuberculosis_H37Rv ---------------------------MVDPPGNDDDHGDLDALDFS-AA MLBr_00407|M.leprae_Br4923 MGSRRRINRRLLPMSTFPAWQEFRRDVVVVFPGNDFDRDDCDTVDPWGVG TH_2234|M.thermoresistible__bu -----------------MTSPYDPDAEWDGESGGVGDSGDDLAAALDFSA Mflv_0774|M.gilvum_PYR-GCK DDAA-DQNGLGDVFGL--------VDAVSAGADDGK--------MPMFTV Mvan_0071|M.vanbaalenii_PYR-1 GDE--DEADLGVIFG----------DFGSASDDDGE--------MPMFTV MSMEG_0058|M.smegmatis_MC2_155 DDEPESSLDVFDVFDV-GAPADEPWDAATSADGDGED----ETPAPVFTV MMAR_5432|M.marinum_M TGETDSAIDALLSYAP-AQPEDTGSDMSAILGATEED---KTDECELFTV MUL_4592|M.ulcerans_Agy99 D-NKESAIDALRAFAP-TQPEEADVDLRALHKPAKDD---KAEECDLFTV Mb3897|M.bovis_AF2122/97 HTNEASPLDALDDYAP-VQTDDAEGDLDALHALTERD---EEPELELFTV Rv3867|M.tuberculosis_H37Rv HTNEASPLDALDDYAP-VQTDDAEGDLDALHALTERD---EEPELELFTV MLBr_00407|M.leprae_Br4923 G-AAHWTIDPIVGFASSSAPQDRGTDVDNTRGQAEEDEKQKEPEVAIFTV TH_2234|M.thermoresistible__bu PGEDDADVDDLYVAEP--EPEEPAEGYVDPYEQAEEP----EDLGPLFSV . . :*:* Mflv_0774|M.gilvum_PYR-GCK TNPPGTVTVTTCLDGRVHDVALSHSAAVLSEIALADEIVVIAGLATQDAR Mvan_0071|M.vanbaalenii_PYR-1 TNPPGTVTVTTYMDGRVHQIELAPSAAALPEAVLADEIVVIAGLATQDAR MSMEG_0058|M.smegmatis_MC2_155 TNPPGTVTVAAYLDGRVHQIALSPKVVNMTERELADEIRVIADLAGEQAR MMAR_5432|M.marinum_M TNPQGSVSVSAVMGGDIHRVELSDKVDNMSEPRLAEEIFVLADLARQKAR MUL_4592|M.ulcerans_Agy99 TNPQGTVSVSAVLGGKIRRVELSEEVTTMAEPNLAAEIYVIADLARQKAR Mb3897|M.bovis_AF2122/97 TNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIADLARQKAR Rv3867|M.tuberculosis_H37Rv TNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIADLARQKAR MLBr_00407|M.leprae_Br4923 TNPPRTVSVSVLMDGRIDHVELSKRVTWMSESQVASEILVLADLARQKAQ TH_2234|M.thermoresistible__bu TNPPGTLTVTAFLDGGIQSVEISPSVTGMTESELAQELLAIAKVAAMKAR *** :::*:. :.* : : :: . :.* :* *: .:* :* .*: Mflv_0774|M.gilvum_PYR-GCK SAQYTVMLDGMREHGHDTVT----TRDFLTRDLHLPTPEQARAARAELFT Mvan_0071|M.vanbaalenii_PYR-1 SAQYTFMLEGMREHGHDNVT----TRDFLNRDLDLPTPEQARAARAELFT MSMEG_0058|M.smegmatis_MC2_155 SAQYSFMLEGMREHGHDDAA----TRDFLTRDLNLPTPEQADANQAQVFS MMAR_5432|M.marinum_M AAQHAFMLQGMDEVDDEEQR--AVLREIVEKTMNLPTPEQAAAAEEEVFA MUL_4592|M.ulcerans_Agy99 AAQHTLMVQSMKDIESEKHR--AKLREFLGTMLNLPTPEQAAAAQKEVFA Mb3897|M.bovis_AF2122/97 ASQYTFMVENIGELTDEDAEGSALLREFVGMTLNLPTPEEAAAAEAEVFA Rv3867|M.tuberculosis_H37Rv ASQYTFMVENIGELTDEDAEGSALLREFVGMTLNLPTPEEAAAAEAEVFA MLBr_00407|M.leprae_Br4923 SAQYTFILDKLSQLADGDEHRVALLRESVGNTWNLPSPEQAAEAEAEVFA TH_2234|M.thermoresistible__bu AGQYEFLLEATPQEAGEREF----LGEFLQHGVGLPTPEQAAQVEAEFVQ :.*: .::: : : : **:**:* . :.. Mflv_0774|M.gilvum_PYR-GCK TRYAGEE---------------------------- Mvan_0071|M.vanbaalenii_PYR-1 TRYAGDE---------------------------- MSMEG_0058|M.smegmatis_MC2_155 TRYGGDHG--------------------------- MMAR_5432|M.marinum_M TRYKNDFTATTG----------------------- MUL_4592|M.ulcerans_Agy99 TRYGRESARKSRGNGLDGVPVFARRVSDVHREADW Mb3897|M.bovis_AF2122/97 TRYDVDYTSRYKADD-------------------- Rv3867|M.tuberculosis_H37Rv TRYDVDYTSRYKADD-------------------- MLBr_00407|M.leprae_Br4923 TRYSDYCPAQDTENDQW------------------ TH_2234|M.thermoresistible__bu RYLRDDV----------------------------