For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SNGTSRSWDDDEFADADSQSAEIGSAFDLYTKNDLYGSHTESGEIGDSRDDGGIVQPPNPSVSGDEHLPL WSSVTNPPGTVTVFPDGRIRSIALSPGVVRMSERQLEDEIQVVADLAWRHARSEVHEFAVEVARRTGFND SEMGHHLAKNAGLPSRADVEALKSQIFSTRYYGDTD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5709 | - | - | 100% (177) | hypothetical protein MSMEG_5709 |
M. smegmatis MC2 155 | MSMEG_0058 | - | 3e-23 | 38.15% (173) | hypothetical protein MSMEG_0058 |
M. smegmatis MC2 155 | MSMEG_6449 | - | 2e-08 | 30.53% (95) | hypothetical protein MSMEG_6449 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3897 | - | 4e-12 | 33.77% (154) | hypothetical protein Mb3897 |
M. gilvum PYR-GCK | Mflv_0774 | - | 2e-14 | 32.90% (155) | hypothetical protein Mflv_0774 |
M. tuberculosis H37Rv | Rv3867 | - | 4e-12 | 33.77% (154) | hypothetical protein Rv3867 |
M. leprae Br4923 | MLBr_00407 | - | 1e-10 | 37.14% (105) | hypothetical protein MLBr_00407 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4168 | - | 2e-11 | 35.77% (123) | hypothetical protein MMAR_4168 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2234 | - | 2e-13 | 30.68% (176) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2552 | - | 4e-10 | 32.23% (121) | hypothetical protein MUL_2552 |
M. vanbaalenii PYR-1 | Mvan_0071 | - | 2e-16 | 36.92% (130) | hypothetical protein Mvan_0071 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3897|M.bovis_AF2122/97 -----------------------------------MVDPPGNDDDHGDLD Rv3867|M.tuberculosis_H37Rv -----------------------------------MVDPPGNDDDHGDLD MLBr_00407|M.leprae_Br4923 MGSRRRINRRLLPMSTFPAWQE--------FRRDVVVVFPGNDFDRDDCD MMAR_4168|M.marinum_M MRRAAAYARGSFSIWPTRAREANFAMLDTKVRRDAVVNLPGNDFDSDDFD MUL_2552|M.ulcerans_Agy99 -------------------------------------------------- TH_2234|M.thermoresistible__bu --MTSPYDP----------------------DAEWDGESGGVGDSGDDLA Mflv_0774|M.gilvum_PYR-GCK ------------------------------------MR--------KAHD Mvan_0071|M.vanbaalenii_PYR-1 ------------------------------------MANPPPGFEASGFD MSMEG_5709|M.smegmatis_MC2_155 --------------------------------MSNGTSRSWDDDEFADAD Mb3897|M.bovis_AF2122/97 ALDFSAAHTNEASPLDALDDYAPVQT-DDAEGDLDALHALTERDE---EP Rv3867|M.tuberculosis_H37Rv ALDFSAAHTNEASPLDALDDYAPVQT-DDAEGDLDALHALTERDE---EP MLBr_00407|M.leprae_Br4923 TVDPWGVGGAAHWTIDPIVGFASSSAPQDRGTDVDNTRGQAEEDEKQKEP MMAR_4168|M.marinum_M AVDLWDPDGKQRWTADPIVGFAGAGA-QDSEASADDSPAPQEQPE---ED MUL_2552|M.ulcerans_Agy99 ------MPPRRRVPRKASTRMAPRCS------------------------ TH_2234|M.thermoresistible__bu AALDFSAPGEDDADVDDLYVAEPEPE-EPAEGYVDPYEQAEEPED----- Mflv_0774|M.gilvum_PYR-GCK TVEYDEDGDHYDLAALDLGSQDDAADQNGLGDVFGLVDAVSAGAD---DG Mvan_0071|M.vanbaalenii_PYR-1 ASGFHDGGDHDDLAALDFSIAGDE-DEADLGVIFG--DFGSASDD---DG MSMEG_5709|M.smegmatis_MC2_155 SQSAEIGSAFDLYTKNDLYGSHTESGEIGDSRDDGGIVQPPNPSVSGDEH Mb3897|M.bovis_AF2122/97 ELELFTVTNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIAD Rv3867|M.tuberculosis_H37Rv ELELFTVTNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIAD MLBr_00407|M.leprae_Br4923 EVAIFTVTNPPRTVSVSVLMDGRIDHVELSKRVTWMSESQVASEILVLAD MMAR_4168|M.marinum_M EIAVFTVTNPQGSVAVSALMDGRTEDIELSKKVARMSESQLASEILVLAD MUL_2552|M.ulcerans_Agy99 -----RSSTPPGTVSVWALMDGRIHRVTLSAKVTSMSEAELAEEVLVIAA TH_2234|M.thermoresistible__bu LGPLFSVTNPPGTLTVTAFLDGGIQSVEISPSVTGMTESELAQELLAIAK Mflv_0774|M.gilvum_PYR-GCK KMPMFTVTNPPGTVTVTTCLDGRVHDVALSHSAAVLSEIALADEIVVIAG Mvan_0071|M.vanbaalenii_PYR-1 EMPMFTVTNPPGTVTVTTYMDGRVHQIELAPSAAALPEAVLADEIVVIAG MSMEG_5709|M.smegmatis_MC2_155 LPLWSSVTNPPG--TVTVFPDGRIRSIALSPGVVRMSERQLEDEIQVVAD :.* :* . ** : :: .. :.* : .*: .:* Mb3897|M.bovis_AF2122/97 LARQKARASQYTFMVENIGE---LTDEDAEGSALLREFVGMTLNLPTPEE Rv3867|M.tuberculosis_H37Rv LARQKARASQYTFMVENIGE---LTDEDAEGSALLREFVGMTLNLPTPEE MLBr_00407|M.leprae_Br4923 LARQKAQSAQYTFILDKLSQ---LADGDEHRVALLRESVGNTWNLPSPEQ MMAR_4168|M.marinum_M LARQKAQAAQYAFILNKLTH---AADGDQQRVQQLQDFVGNTWSLPSPEE MUL_2552|M.ulcerans_Agy99 LARQNGLAAQHSYMLGSYSEWEPVAEMGTDEREVLRDFMENTMGLMSEEQ TH_2234|M.thermoresistible__bu VAAMKARAGQYEFLLEATPQ-------EAGEREFLGEFLQHGVGLPTPEQ Mflv_0774|M.gilvum_PYR-GCK LATQDARSAQYTVMLDGMRE-------HGHDTVTTRDFLTRDLHLPTPEQ Mvan_0071|M.vanbaalenii_PYR-1 LATQDARSAQYTFMLEGMRE-------HGHDNVTTRDFLNRDLDLPTPEQ MSMEG_5709|M.smegmatis_MC2_155 LAWRHARSEVHEFAVEVARR-------TGFNDSEMGHHLAKNAGLPSRAD :* .. : : : . . : * : : Mb3897|M.bovis_AF2122/97 AAAAEAEVFATRYDVDYTSRYKADD----- Rv3867|M.tuberculosis_H37Rv AAAAEAEVFATRYDVDYTSRYKADD----- MLBr_00407|M.leprae_Br4923 AAEAEAEVFATRYSDYCPAQDTENDQW--- MMAR_4168|M.marinum_M AAAAEAEVFATRYGDDRSAHDSASEQCGFA MUL_2552|M.ulcerans_Agy99 ATAKQAEVFSTRYR---------------- TH_2234|M.thermoresistible__bu AAQVEAEFVQRYLRDDV------------- Mflv_0774|M.gilvum_PYR-GCK ARAARAELFTTRYAGEE------------- Mvan_0071|M.vanbaalenii_PYR-1 ARAARAELFTTRYAGDE------------- MSMEG_5709|M.smegmatis_MC2_155 VEALKSQIFSTRYYGDTD------------ . .::..