For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ADHNTPFSSSDDDWGDDSAAFDSAPDASELGVFGEYLPTEGDAESSLDALDAVASAPISEVDEPDPGPLF SATNPPGTITVTAYLSGWLQRIDLAPSVVNMTESQLAREIADLAQIATKKAGAGQYVFLLYSTLQQVGDS PGVRSMLKETLGLPTPEEAAEAEAAYTARYTRERN*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0080 | - | - | 100% (176) | hypothetical protein MSMEG_0080 |
M. smegmatis MC2 155 | MSMEG_0058 | - | 6e-23 | 36.31% (179) | hypothetical protein MSMEG_0058 |
M. smegmatis MC2 155 | MSMEG_0722 | - | 2e-14 | 32.73% (165) | hypothetical protein MSMEG_0722 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3897 | - | 7e-23 | 38.20% (178) | hypothetical protein Mb3897 |
M. gilvum PYR-GCK | Mflv_0156 | - | 6e-17 | 37.88% (132) | hypothetical protein Mflv_0156 |
M. tuberculosis H37Rv | Rv3867 | - | 7e-23 | 38.20% (178) | hypothetical protein Rv3867 |
M. leprae Br4923 | MLBr_00407 | - | 1e-16 | 40.16% (122) | hypothetical protein MLBr_00407 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5442 | - | 6e-20 | 34.62% (182) | hypothetical protein MMAR_5442 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2234 | - | 8e-32 | 45.12% (164) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4592 | - | 2e-16 | 34.44% (151) | hypothetical protein MUL_4592 |
M. vanbaalenii PYR-1 | Mvan_0071 | - | 1e-19 | 42.48% (113) | hypothetical protein Mvan_0071 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0080|M.smegmatis_MC2_155 ---------------------MADHNTPFSSSDDDWG---DDSAAFDSAP TH_2234|M.thermoresistible__bu ---------------------MTSPYDPDAEWDGESGGVGDSGDDLAAAL Mflv_0156|M.gilvum_PYR-GCK --------------------------MPLIDPGDDWE---DAGSDLDALV Mb3897|M.bovis_AF2122/97 ---------------------------MVDPPGNDDDHGDLDALDFSAAH Rv3867|M.tuberculosis_H37Rv ---------------------------MVDPPGNDDDHGDLDALDFSAAH MMAR_5442|M.marinum_M ----------------------------MDLPGNDDYNQDLGALDFSGGG MLBr_00407|M.leprae_Br4923 MGSRRRINRRLLPMSTFPAWQEFRRDVVVVFPGNDFDRDDCDTVDPWGVG MUL_4592|M.ulcerans_Agy99 ----------------------------MVQPRSN-AHSNLDALKFSRTA Mvan_0071|M.vanbaalenii_PYR-1 ----------------------------MANPPPGFEASGFDASGFHDGG MSMEG_0080|M.smegmatis_MC2_155 DASELGVFGEYLPTEGDAESSLDALDAVASAPISEVDEP----DPGPLFS TH_2234|M.thermoresistible__bu DFSAPGEDDADVDDLYVAEPEPEEPAEGYVDPYEQAEEPE---DLGPLFS Mflv_0156|M.gilvum_PYR-GCK APEE--------------DPGPE----------------------IPVVQ Mb3897|M.bovis_AF2122/97 TNEASPLDALDDYAP---VQTDDAEGDLDALHALTERDE---EPELELFT Rv3867|M.tuberculosis_H37Rv TNEASPLDALDDYAP---VQTDDAEGDLDALHALTERDE---EPELELFT MMAR_5442|M.marinum_M TSEDSGLGALDEYAPPEPQETEQAGADLDALHGLTEKED---EPDIAMFT MLBr_00407|M.leprae_Br4923 GAAHWTIDPIVGFAS--SSAPQDRGTDVDNTRGQAEEDEKQKEPEVAIFT MUL_4592|M.ulcerans_Agy99 DNKESAIDALRAFAP---TQPEEADVDLRALHKPAKDDK---AEECDLFT Mvan_0071|M.vanbaalenii_PYR-1 DHDDLAALDFSIAGD---EDEADLGVIFGDFGSASDDDG-----EMPMFT : :. MSMEG_0080|M.smegmatis_MC2_155 ATNPPGTITVTAYLSGWLQRIDLAPSVVNMTESQLAREIADLAQIATKKA TH_2234|M.thermoresistible__bu VTNPPGTLTVTAFLDGGIQSVEISPSVTGMTESELAQELLAIAKVAAMKA Mflv_0156|M.gilvum_PYR-GCK VTNPSGTITITANLDGSIARVALTPAVTRWTESELAAAITELAEVAAKRA Mb3897|M.bovis_AF2122/97 VTNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIADLARQKA Rv3867|M.tuberculosis_H37Rv VTNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIADLARQKA MMAR_5442|M.marinum_M VTNPQGSVSVTTMMGGIVQQVTVTDKAANMSESALAEEIFVIADLARQKA MLBr_00407|M.leprae_Br4923 VTNPPRTVSVSVLMDGRIDHVELSKRVTWMSESQVASEILVLADLARQKA MUL_4592|M.ulcerans_Agy99 VTNPQGTVSVSAVLGGKIRRVELSEEVTTMAEPNLAAEIYVIADLARQKA Mvan_0071|M.vanbaalenii_PYR-1 VTNPPGTVTVTTYMDGRVHQIELAPSAAALPEAVLADEIVVIAGLATQDA .*** :::::. :.* : : :: .. .*. :* : :* :* * MSMEG_0080|M.smegmatis_MC2_155 GAGQYVFLLYSTL-----QQVGDSPGVRSMLKETLGLPTPEEAAEAEAAY TH_2234|M.thermoresistible__bu RAGQYEFLLEATP-----QEAGEREFLGEFLQHGVGLPTPEQAAQVEAEF Mflv_0156|M.gilvum_PYR-GCK TAVMHVTVVEMFV-----AQGVDRTEAREFVSSNMPFATPAQADAALEEL Mb3897|M.bovis_AF2122/97 RASQYTFMVENIG-ELTDEDAEGSALLREFVGMTLNLPTPEEAAAAEAEV Rv3867|M.tuberculosis_H37Rv RASQYTFMVENIG-ELTDEDAEGSALLREFVGMTLNLPTPEEAAAAEAEV MMAR_5442|M.marinum_M RAAQHTFMVEAMASELSDETEEEGALLREFVGMTLNLPTPEEAEAAEAEV MLBr_00407|M.leprae_Br4923 QSAQYTFILDKLS-QLADGDEHRVALLRESVGNTWNLPSPEQAAEAEAEV MUL_4592|M.ulcerans_Agy99 RAAQHTLMVQSMK---DIESEKHRAKLREFLGTMLNLPTPEQAAAAQKEV Mvan_0071|M.vanbaalenii_PYR-1 RSAQYTFMLEGMR-----EHGHDNVTTRDFLNRDLDLPTPEQARAARAEL : : :: . : :.:* :* . MSMEG_0080|M.smegmatis_MC2_155 TARYTRERN---------------------------- TH_2234|M.thermoresistible__bu VQRYLRDDV---------------------------- Mflv_0156|M.gilvum_PYR-GCK SARYAHEGR---------------------------- Mb3897|M.bovis_AF2122/97 FATRYDVDYTSRYKADD-------------------- Rv3867|M.tuberculosis_H37Rv FATRYDVDYTSRYKADD-------------------- MMAR_5442|M.marinum_M FATRYEVDYTSRYNER--------------------- MLBr_00407|M.leprae_Br4923 FATRYSDYCPAQDTENDQW------------------ MUL_4592|M.ulcerans_Agy99 FATRYGRESARKSRGNGLDGVPVFARRVSDVHREADW Mvan_0071|M.vanbaalenii_PYR-1 FTTRYAGDE----------------------------