For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RKAHDTVEYDEDGDHYDLAALDLGSQDDAADQNGLGDVFGLVDAVSAGADDGKMPMFTVTNPPGTVTVTT CLDGRVHDVALSHSAAVLSEIALADEIVVIAGLATQDARSAQYTVMLDGMREHGHDTVTTRDFLTRDLHL PTPEQARAARAELFTTRYAGEE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0774 | - | - | 100% (163) | hypothetical protein Mflv_0774 |
M. gilvum PYR-GCK | Mflv_0156 | - | 1e-12 | 34.43% (122) | hypothetical protein Mflv_0156 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3897 | - | 1e-25 | 42.68% (164) | hypothetical protein Mb3897 |
M. tuberculosis H37Rv | Rv3867 | - | 1e-25 | 42.68% (164) | hypothetical protein Rv3867 |
M. leprae Br4923 | MLBr_00407 | - | 4e-20 | 44.14% (111) | hypothetical protein MLBr_00407 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5442 | - | 2e-23 | 41.78% (146) | hypothetical protein MMAR_5442 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0058 | - | 3e-41 | 55.36% (168) | hypothetical protein MSMEG_0058 |
M. thermoresistible (build 8) | TH_2234 | - | 1e-17 | 40.74% (108) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4592 | - | 5e-21 | 49.07% (108) | hypothetical protein MUL_4592 |
M. vanbaalenii PYR-1 | Mvan_0071 | - | 2e-57 | 72.15% (158) | hypothetical protein Mvan_0071 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0774|M.gilvum_PYR-GCK --MR--------KAHDTVEYDEDG------------DHYDLAALDLGSQD Mvan_0071|M.vanbaalenii_PYR-1 --MANPPPGFEASGFDASGFHDGG------------DHDDLAALDFSIAG MSMEG_0058|M.smegmatis_MC2_155 --MG------DGSPYDP-EYDD--------------DHDSLAALDFPGTD Mb3897|M.bovis_AF2122/97 -------------MVDPPGNDD--------------DHGDLDALDFSAAH Rv3867|M.tuberculosis_H37Rv -------------MVDPPGNDD--------------DHGDLDALDFSAAH MMAR_5442|M.marinum_M --------------MDLPGNDD--------------YNQDLGALDFSGGG MUL_4592|M.ulcerans_Agy99 -------------MVQPRSN----------------AHSNLDALKFSRTA MLBr_00407|M.leprae_Br4923 MGSRRRINRRLLPMSTFPAWQEFRRDVVVVFPGNDFDRDDCDTVDPWGVG TH_2234|M.thermoresistible__bu ----------MTSPYDPDAEWDGESGGVG-----DSGDDLAAALDFSAPG ::. Mflv_0774|M.gilvum_PYR-GCK DAA-DQNGLGDVFGL------------VDAVSAGADDGK------MPMFT Mvan_0071|M.vanbaalenii_PYR-1 DE--DEADLGVIFG--------------DFGSASDDDGE------MPMFT MSMEG_0058|M.smegmatis_MC2_155 DEPESSLDVFDVFDVG-----APADEPWDAATSADGDGEDETP--APVFT Mb3897|M.bovis_AF2122/97 TNEASPLDALDDYAP---VQTDDAEGDLDALHALTERDEEPE---LELFT Rv3867|M.tuberculosis_H37Rv TNEASPLDALDDYAP---VQTDDAEGDLDALHALTERDEEPE---LELFT MMAR_5442|M.marinum_M TSEDSGLGALDEYAPPEPQETEQAGADLDALHGLTEKEDEPD---IAMFT MUL_4592|M.ulcerans_Agy99 DNKESAIDALRAFAP---TQPEEADVDLRALHKPAKDDKAEE---CDLFT MLBr_00407|M.leprae_Br4923 GAAHWTIDPIVGFASS--SAPQDRGTDVDNTRGQAEEDEKQKEPEVAIFT TH_2234|M.thermoresistible__bu EDDADVDDLYVAEPEP-----EEPAEGYVDPYEQAEEPEDLG----PLFS . . :*: Mflv_0774|M.gilvum_PYR-GCK VTNPPGTVTVTTCLDGRVHDVALSHSAAVLSEIALADEIVVIAGLATQDA Mvan_0071|M.vanbaalenii_PYR-1 VTNPPGTVTVTTYMDGRVHQIELAPSAAALPEAVLADEIVVIAGLATQDA MSMEG_0058|M.smegmatis_MC2_155 VTNPPGTVTVAAYLDGRVHQIALSPKVVNMTERELADEIRVIADLAGEQA Mb3897|M.bovis_AF2122/97 VTNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIADLARQKA Rv3867|M.tuberculosis_H37Rv VTNPQGSVSVSTLMDGRIQHVELTDKATSMSEAQLADEIFVIADLARQKA MMAR_5442|M.marinum_M VTNPQGSVSVTTMMGGIVQQVTVTDKAANMSESALAEEIFVIADLARQKA MUL_4592|M.ulcerans_Agy99 VTNPQGTVSVSAVLGGKIRRVELSEEVTTMAEPNLAAEIYVIADLARQKA MLBr_00407|M.leprae_Br4923 VTNPPRTVSVSVLMDGRIDHVELSKRVTWMSESQVASEILVLADLARQKA TH_2234|M.thermoresistible__bu VTNPPGTLTVTAFLDGGIQSVEISPSVTGMTESELAQELLAIAKVAAMKA **** :::*:. :.* : : :: .. :.* :* *: .:* :* .* Mflv_0774|M.gilvum_PYR-GCK RSAQYTVMLDGMR-----EHGHDTVTTRDFLTRDLHLPTPEQARAARAEL Mvan_0071|M.vanbaalenii_PYR-1 RSAQYTFMLEGMR-----EHGHDNVTTRDFLNRDLDLPTPEQARAARAEL MSMEG_0058|M.smegmatis_MC2_155 RSAQYSFMLEGMR-----EHGHDDAATRDFLTRDLNLPTPEQADANQAQV Mb3897|M.bovis_AF2122/97 RASQYTFMVENIG-ELTDEDAEGSALLREFVGMTLNLPTPEEAAAAEAEV Rv3867|M.tuberculosis_H37Rv RASQYTFMVENIG-ELTDEDAEGSALLREFVGMTLNLPTPEEAAAAEAEV MMAR_5442|M.marinum_M RAAQHTFMVEAMASELSDETEEEGALLREFVGMTLNLPTPEEAEAAEAEV MUL_4592|M.ulcerans_Agy99 RAAQHTLMVQSMK---DIESEKHRAKLREFLGTMLNLPTPEQAAAAQKEV MLBr_00407|M.leprae_Br4923 QSAQYTFILDKLS-QLADGDEHRVALLRESVGNTWNLPSPEQAAEAEAEV TH_2234|M.thermoresistible__bu RAGQYEFLLEATP-----QEAGEREFLGEFLQHGVGLPTPEQAAQVEAEF ::.*: .::: : : **:**:* . :. Mflv_0774|M.gilvum_PYR-GCK FTTRYAGEE---------------------------- Mvan_0071|M.vanbaalenii_PYR-1 FTTRYAGDE---------------------------- MSMEG_0058|M.smegmatis_MC2_155 FSTRYGGDHG--------------------------- Mb3897|M.bovis_AF2122/97 FATRYDVDYTSRYKADD-------------------- Rv3867|M.tuberculosis_H37Rv FATRYDVDYTSRYKADD-------------------- MMAR_5442|M.marinum_M FATRYEVDYTSRYNER--------------------- MUL_4592|M.ulcerans_Agy99 FATRYGRESARKSRGNGLDGVPVFARRVSDVHREADW MLBr_00407|M.leprae_Br4923 FATRYSDYCPAQDTENDQW------------------ TH_2234|M.thermoresistible__bu VQRYLRDDV---------------------------- .