For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
STESTSPAIVVGVDGSPASTLAVEWAARDAEMRNVPLKVVHVFAPMVTPANGWADVAMPADYARWREDQA HQIVQQAHAVAVDAAAPGRAAHVTSEVRYAAIVPAMVELSQQAEMVVVGCRGQGGVASALLGSVSSGLAH HAHCPVAIIHDDEALPPRSAQAPVLVGVDGSPTSELATEIAFDEASRRGAELVALHAWTDMGPLDFPSIN WAPIEWSNIKDQEEEVLAERLCGWQERYPDVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFPGML LGSVSRAVINSARIPVIIARTPPNS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5410 | - | - | 100% (306) | hypothetical protein MMAR_5410 |
M. marinum M | MMAR_3477 | - | 7e-86 | 52.46% (305) | hypothetical protein MMAR_3477 |
M. marinum M | MMAR_2993 | - | 1e-83 | 51.66% (302) | hypothetical protein MMAR_2993 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2019 | - | 1e-110 | 63.61% (316) | hypothetical protein Mb2019 |
M. gilvum PYR-GCK | Mflv_4382 | - | 9e-82 | 51.66% (302) | UspA domain-containing protein |
M. tuberculosis H37Rv | Rv1996 | - | 1e-110 | 63.61% (316) | hypothetical protein Rv1996 |
M. leprae Br4923 | MLBr_01390 | - | 2e-06 | 28.47% (144) | hypothetical protein MLBr_01390 |
M. abscessus ATCC 19977 | MAB_2489 | - | 7e-48 | 36.96% (303) | hypothetical protein MAB_2489 |
M. avium 104 | MAV_2507 | - | 1e-87 | 53.49% (301) | universal stress protein family protein |
M. smegmatis MC2 155 | MSMEG_3940 | - | 1e-74 | 50.00% (294) | universal stress protein family protein |
M. thermoresistible (build 8) | TH_2494 | - | 4e-76 | 49.21% (317) | PUTATIVE putative conserved hypothetical membrane protein |
M. ulcerans Agy99 | MUL_5033 | - | 1e-173 | 97.71% (306) | hypothetical protein MUL_5033 |
M. vanbaalenii PYR-1 | Mvan_1963 | - | 4e-82 | 54.15% (301) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4382|M.gilvum_PYR-GCK --MSTQPAPLGIVVGVDGSAASRVAVDWAARDAALRQVPLTLAYVLPGAA Mvan_1963|M.vanbaalenii_PYR-1 --MSTQPAPVGIVVAVDGSDASRVAVDWAARDAAMRRIPLTLAHVLPSAA MMAR_5410|M.marinum_M --MSTESTSPAIVVGVDGSPASTLAVEWAARDAEMRNVPLKVVHVFAPMV MUL_5033|M.ulcerans_Agy99 --MSTESTSPAIVVGVDGSPASTLAVDWAARDAEMRNVPLKVVHVFAPMV Mb2019|M.bovis_AF2122/97 --MSAQQTNLGIVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVI Rv1996|M.tuberculosis_H37Rv --MSAQQTNLGIVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVI MSMEG_3940|M.smegmatis_MC2_155 MSHNGNGAGYGMVVAVDGSAESDAAVRWAAREATLRKIPVTVMHVVEPMI TH_2494|M.thermoresistible__bu --VSSTAAYEGIVVGVDGSAASADAVRWAARSAALRNLQLTLVHVMTATS MAV_2507|M.avium_104 --MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVNAAT MAB_2489|M.abscessus_ATCC_1997 --MTTSTPNSHILVGVDGSTSALHALTWAGAEAQRRNLPLTLVHVIDHSS MLBr_01390|M.leprae_Br4923 -----MGAYQTVVVGTDGSDSSLRAVDRAGKIAG---------------- ::*..*** : *: *. * Mflv_4382|M.gilvum_PYR-GCK VQS---WIQVPLPASFYEDEK--------AEATRVLADARAVVDAATQAH Mvan_1963|M.vanbaalenii_PYR-1 TQS---WIQVPLPAAFFEDEK--------LEAERILADARALVTAATEGG MMAR_5410|M.marinum_M TPANG-WADVAMPADYARWRE--------DQAHQIVQQAHAVAVDAAAPG MUL_5033|M.ulcerans_Agy99 APANG-WADVAMPADYARWRE--------DQAHQIVQQAHAVAVDAAAPG Mb2019|M.bovis_AF2122/97 TAPEG-WAFEYSRFQEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSG Rv1996|M.tuberculosis_H37Rv TAPEG-WAFEYSRFQEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSG MSMEG_3940|M.smegmatis_MC2_155 VN----WPVPPVQGSVTEWQE--------ANARNVIKH----AHDTFVAV TH_2494|M.thermoresistible__bu IGAPLVWPAGPIPDSLIQWQE--------DEARQILADSAEIAENAFQEA MAV_2507|M.avium_104 V-----WPQVPMAAEAVAWQE--------DDGRRVLQEAVKIAEDATRNG MAB_2489|M.abscessus_ATCC_1997 LGQG---YNLGASASFFQHLE--------TDGAEFLSQAKDHVYALHPNV MLBr_01390|M.leprae_Br4923 -----------------------------SDAKLIIASAYLPQHDN---- :. .: Mflv_4382|M.gilvum_PYR-GCK PLPAVT----------EKVLSGQPVPTLADLSRDADMIVVGSRGMGKWER Mvan_1963|M.vanbaalenii_PYR-1 EALTVD----------EVVLSGQPVAALVDLAKDAEMLVMGSRGLGKWER MMAR_5410|M.marinum_M RAAHVT----------SEVRYAAIVPAMVELSQQAEMVVVGCRGQGGVAS MUL_5033|M.ulcerans_Agy99 RAAHVT----------SEVRYAAIVPAMVELSLQAEMVVVGCRGQGGVAS Mb2019|M.bovis_AF2122/97 RAAQIT----------GEVLHGQIVPTLANISRQVAMVVLGYRGQGAVAG Rv1996|M.tuberculosis_H37Rv RAAQIT----------GEVLHGQIVPTLANISRQVAMVVLGYRGQGAVAG MSMEG_3940|M.smegmatis_MC2_155 EESAP-----DGIR--HEIRYAGIVAELVDVSKNATMMVVGSRGLGAFGG TH_2494|M.thermoresistible__bu RAAGPGPAGDDAVRVVTGVVRAAPVPTLVDASKQAKLVAVGSRGQGPLRR MAV_2507|M.avium_104 RNLAIT----------TELWHAPPAPTLAQLSEEAELVVVGSTGRGAIGR MAB_2489|M.abscessus_ATCC_1997 EVSTVK-------------ATGRPVPVLVELSRNALMTVLGSSGLGGFTG MLBr_01390|M.leprae_Br4923 -------------------------ARAFDILKDESYKVTG--------- . : : . * Mflv_4382|M.gilvum_PYR-GCK RVLGSVSSGLVHHARCPVAVIYDEDPLIPHPAQAPVVVGIDGSPASERAT Mvan_1963|M.vanbaalenii_PYR-1 RLLGSVSSGVVHHAHCPVAVIHDVDPLIPHPAQAPVVVGVDGSPASEHAT MMAR_5410|M.marinum_M ALLGSVSSGLAHHAHCPVAIIHDDEALPPRSAQAPVLVGVDGSPTSELAT MUL_5033|M.ulcerans_Agy99 ALLGSVSSGLAHHAHCPVAIIHDDEPLPPRSAQAPVLVGVDGSPTSELAT Mb2019|M.bovis_AF2122/97 ALLGSVSSSLVRHAHGPVAVIPE-EPRPARPPHAPVVVGIDGSPTSGLAA Rv1996|M.tuberculosis_H37Rv ALLGSVSSSLVRHAHGPVAVIPE-EPRPARPPHAPVVVGIDGSPTSGLAA MSMEG_3940|M.smegmatis_MC2_155 ALLGSVSSGVIHHAHCPVAVIHGDQIRRPD-PRSPVLVGIDGSPASEDAT TH_2494|M.thermoresistible__bu VLLGSVSSGLVHHAHCPVAVIREGTPHTPDFAKRPVLVGIDGSESAQRAT MAV_2507|M.avium_104 LLLGSVSSGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELAT MAB_2489|M.abscessus_ATCC_1997 MMAGSVSVSLTAKGHSPVVVVRE----SPVPGGGPVVVGIDDSESSDGAA MLBr_01390|M.leprae_Br4923 --------------TAPIYEILH-----------------DAKERAHAAG *: : * . : * Mflv_4382|M.gilvum_PYR-GCK AIAFDEACRRGVDLVAVHTWSDAG--YELP-----GVEWTEVQPEEEMLL Mvan_1963|M.vanbaalenii_PYR-1 AIAFDEASFRGVDLVAVHTWSDAG--YELP-----GTGWAEIQPEEDMLL MMAR_5410|M.marinum_M EIAFDEASRRGAELVALHAWTDMGP-LDFPSINWAPIEWSNIKDQEEEVL MUL_5033|M.ulcerans_Agy99 EIGFDEASRRGAELVALHAWTDMGP-LDFPSINWAPIEWSNIKDQEEEVL Mb2019|M.bovis_AF2122/97 EIAFDEASRRGVDLVALHAWSDMGP-LDFPRLNWAPIEWRNLEDEQEKML Rv1996|M.tuberculosis_H37Rv EIAFDEASRRGVDLVALHAWSDMGP-LDFPRLNWAPIEWRNLEDEQEKML MSMEG_3940|M.smegmatis_MC2_155 AFAFDEASRRRVDLIALHAWSDVGV-FSAL-----GMDWHEYEDQGRELL TH_2494|M.thermoresistible__bu AVAFEEASFRGVDLIALHAWSDADI-ADIP-----TLELSAVQQSAERVL MAV_2507|M.avium_104 AIAFDEALRRGVDLNAVHAWSDTQV-FGLP-----GMDWPAVRSQAERSL MAB_2489|M.abscessus_ATCC_1997 AWAFEEAAMRETELVAVHVWNNIPPGYVYAYTAWSAMDSAGEQQRQEQLL MLBr_01390|M.leprae_Br4923 AKNVEERPVVGAPVDALVNLAEKTN------------------------- .:* . : *: : Mflv_4382|M.gilvum_PYR-GCK SERLAGWHERYPDVTVHRVVRRDQPARRLLEEAEKAQLLVVGSHGRGGFT Mvan_1963|M.vanbaalenii_PYR-1 AERLAGWQERYPDVTVHRVVCRDQPARRLLEEAAKGQLLVVGSHGRGGFG MMAR_5410|M.marinum_M AERLCGWQERYPDVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFP MUL_5033|M.ulcerans_Agy99 AERLCGWQERYPDVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFP Mb2019|M.bovis_AF2122/97 ARRLSGWQDRYPDVVVHKVVVCDRPAPRLLELAQTAQLVVVGSHGRGGFP Rv1996|M.tuberculosis_H37Rv ARRLSGWQDRYPDVVVHKVVVCDRPAPRLLELAQTAQLVVVGSHGRGGFP MSMEG_3940|M.smegmatis_MC2_155 GERLAGWRERYPDVRVTRQIVCDQPARWLIDGSRHAQLVVVGSHGRAGFA TH_2494|M.thermoresistible__bu SERLAGFRERYPDVSVHRRIVGSEPARHLVEASEDAQLVVVGSRGRGGFT MAV_2507|M.avium_104 AERLAGWQERYPDVTVHRMVVCDRPARQLIEQSESAQLTVVGSHGRGGLA MAB_2489|M.abscessus_ATCC_1997 AERLAGWQEKYPDVPVRRVVAVGHPADVLLSQAAGAQLIVTGSRGRGDIA MLBr_01390|M.leprae_Br4923 -----------------------------------ADLLVVGNVGLSTIA .:* *.*. * . : Mflv_4382|M.gilvum_PYR-GCK GMLLGSVGSQIVQSSRTPVIVARTA------- Mvan_1963|M.vanbaalenii_PYR-1 GMLLGSVGSQVVQSARGPVIVARR-------- MMAR_5410|M.marinum_M GMLLGSVSRAVINSARIPVIIARTPPNS---- MUL_5033|M.ulcerans_Agy99 GMLLGSVSRAVVNSARIPVIIARTPANS---- Mb2019|M.bovis_AF2122/97 GMHLGSVSRAVVNSGQAPVIVARIPQDPAVPA Rv1996|M.tuberculosis_H37Rv GMHLGSVSRAVVNSGQAPVIVARIPQDPAVPA MSMEG_3940|M.smegmatis_MC2_155 GMLLGSVGSKVARAAYSPVIVVR--------- TH_2494|M.thermoresistible__bu GMLLGSVSRAVVNAVTTPVIVAR--------- MAV_2507|M.avium_104 GTLLGSVSNAVVHSVRMPVIVARPS------- MAB_2489|M.abscessus_ATCC_1997 GFFLGSTSHALIHKASCPVLVAPRT------- MLBr_01390|M.leprae_Br4923 GRLLGSVPANVSRRAKIDVLIVHTTH------ * ***. : . *::.