For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTLWFGTLIALILLIAPGTLIARIAQLSWPIAIAVGPPLTYGVIALAIVPYGALGIPWNGWTALLALAVV AAAVTGFQLLLGRFRDKEAEARGVSRGPALTVAAGVALGTLFIAWAAYRGIPHWQSIPSTWDAVWHANTV RFILDTGQASPTHMGELRNVETHALLYYPSVFHGLTAVFCQLTGAAPTTGYTLNSLAAAIWLFPVSAATL TWRAMRGHLTEWRTAGSAATAAALSASFTALPYVEFGTAAMPNLASYGVAVPAMVLITSTPRHRDRIPIA VLALVGVLSVHIAGGMVVVLLVAAWWLFEALWHPVRGRLADLATLAGVAAISGLIMLPQFISVEQQEDII AGHSFLTYLSKKRGVFDAVFQHSRHLNDFPVQYALIALAAIGGFILLIKKIWWPLAVWVLLVVMNVNAGT PLGGPIDAMAGALGEFFYNDPRRIAAATTLLLMLMAGVALFWIVTLVVTAAQGLTDRFRPLPQPFWVSVT VALLLGVCLVSTWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLATLPGARDTMIGNANTDGTAWMYAVAG LHPLWTHYDYPVQQGPGYHRFIVWAYAGRGDSDPRVVESIKVLNIRYILTSSPTVRGFAVPDGLVSLENS PSWKKIYDNGGARIYEWSGKTAQTHSK
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_5334 | - | - | 100% (657) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3808 | - | 0.0 | 81.38% (666) | transmembrane protein alanine and leucine rich |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv3779 | - | 0.0 | 81.38% (666) | transmembrane protein alanine and leucine rich |
| M. leprae Br4923 | MLBr_00116 | - | 0.0 | 65.70% (656) | hypothetical protein MLBr_00116 |
| M. abscessus ATCC 19977 | MAB_0205c | - | 0.0 | 51.91% (655) | hypothetical protein MAB_0205c |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0094 | - | 0.0 | 98.33% (657) | transmembrane protein |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5334|M.marinum_M MTLWFGTLIALILLIAPGTLIARIAQLSWPIAIAVGPPLTYGVIALAIVP
MUL_0094|M.ulcerans_Agy99 MTLWFGTLIALILLIAPGTLIARIAQLSWPIAIAVGPPLTYGVIALAIVP
Mb3808|M.bovis_AF2122/97 MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIP
Rv3779|M.tuberculosis_H37Rv MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIP
MLBr_00116|M.leprae_Br4923 MGLCCGTLIALFLLIVPETIVARFAALTWPIAIAVSPALTYGVIALVIIP
MAB_0205c|M.abscessus_ATCC_199 MSFAFGVAAALLLLFIPGWLIGRALGLPTHSAAVTAPALTYGLVGLCIVA
* : *. **:**: * ::.* * * ...*.****::.* *:.
MMAR_5334|M.marinum_M YGALGIPWNGWTALLALAVVAAAVTGFQLLLGRFRDKEAEARGVSRGPAL
MUL_0094|M.ulcerans_Agy99 YGALGIPWNGWTALVALAVVTAAVTGFQLLLGRFRDKEAEARGVSRGPAL
Mb3808|M.bovis_AF2122/97 YGALGIPWNGWTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAV
Rv3779|M.tuberculosis_H37Rv YGALGIPWNGWTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAV
MLBr_00116|M.leprae_Br4923 FGAVGIPWNSWTALAALVAVSMLMIAFRLLLVRYRDTAAETRGISGWPAV
MAB_0205c|M.abscessus_ATCC_199 FGSIGIPWNSLSAGFALVGAVIIARLLWRWLRPKRQ-AEQTPSQNRAALV
:*::*****. :* **. . : * *: :: . . . :
MMAR_5334|M.marinum_M TVAAGVALGTLFIAWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQAS
MUL_0094|M.ulcerans_Agy99 TVAAGVALGTLFIAWAAYRGIPHWQSIPSSWDAVWHANTVRFILDTGQAS
Mb3808|M.bovis_AF2122/97 TVAAGVLLGALLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQAS
Rv3779|M.tuberculosis_H37Rv TVAAGVLLGALLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQAS
MLBr_00116|M.leprae_Br4923 TVAVGVLLGALLIGWAAYRGLLHWQSIPSTWDAVWHANTVRFILDTGQAS
MAB_0205c|M.abscessus_ATCC_199 AVTFGVALGMALIFYAFLRGLTHWQSIPSTWDSMWHGNTIRYILDTGQAS
:*: ** ** :* :* **: *******:**::**.**:*:********
MMAR_5334|M.marinum_M PTHMGELRNVETHALLYYPSVFHGLTAVFCQLTGAAPTTGYTLNSLAAAI
MUL_0094|M.ulcerans_Agy99 PTHMGELRNVETHALLYYPSVFHGLTTVFCQLTGAAPTTGYTLNSLAAAI
Mb3808|M.bovis_AF2122/97 STHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASV
Rv3779|M.tuberculosis_H37Rv STHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASV
MLBr_00116|M.leprae_Br4923 PTHMGELRNVETHSVLYYPSVLHALAGVYCQLTGAAPTTGYTVSSLAVAV
MAB_0205c|M.abscessus_ATCC_199 STRMGDLRNVETHATLYYPSAFHGLAAVLCQLTGAAPTTSYTLYAVAGS-
.*:**:*******: *****.:*.*. * **********.**: ::* :
MMAR_5334|M.marinum_M WLFPVSAATLTWRAMRGH----------LTEWRTAGSAATAAALSASFTA
MUL_0094|M.ulcerans_Agy99 WLFPVSAATLTWRAMRGH----------LTEWRTAGSAATAAALSASFTA
Mb3808|M.bovis_AF2122/97 WLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTA
Rv3779|M.tuberculosis_H37Rv WLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTA
MLBr_00116|M.leprae_Br4923 WLFPVSAATLTWHLLRPV----------TTQKRAAGASATAAALSAAFTS
MAB_0205c|M.abscessus_ATCC_199 LLFPLGSAALAWQMLRGR----------TTRTFQAGAAATAAALSASFSA
***:.:*.*:*: :* :. **::.*******:*::
MMAR_5334|M.marinum_M LPYVEFGTAAMPNLASYGVAVPAMVLITSTPRHRDRIPIAVLALVGVLSV
MUL_0094|M.ulcerans_Agy99 LPYVEFGTAAMPNLASYGVAVPAMVLITSTPRHRDRIPIAVLALVGVLSV
Mb3808|M.bovis_AF2122/97 VPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL
Rv3779|M.tuberculosis_H37Rv VPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL
MLBr_00116|M.leprae_Br4923 VPYVEFGVAAMPNLAAYGVAVPTMVLITSTLRHRDRIPVAILALVGTFSV
MAB_0205c|M.abscessus_ATCC_199 LPYVEFHVSAIPNLMSFALVGPALLAITSVVADRSRIPAAILAFTGVASV
:***** .:*:*** ::.:. *::: ***. .*.*** *:**:.*. *:
MMAR_5334|M.marinum_M HIAGGMVVVLLVAAWWLFEALWHPVRGRLADLATLAG------VAAISGL
MUL_0094|M.ulcerans_Agy99 HIAGGMVVVLLVAAWWLFGALWHPVRGRLADLATLAG------VAAISGL
Mb3808|M.bovis_AF2122/97 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAG------VAAMAGL
Rv3779|M.tuberculosis_H37Rv HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAG------VAAMAGL
MLBr_00116|M.leprae_Br4923 HLTGGIVVSLFLLGWWLMNALLHPVRSRAADARTLAA------VVMPTAL
MAB_0205c|M.abscessus_ATCC_199 HTSGAIVVVVFVAAWWVLAPLSRYPGTKSKDKHRLGSGFTPLAVAGVGSL
* :*.:** ::: .**:: .* : : * *.. *. .*
MMAR_5334|M.marinum_M IML-PQFISVEQQEDIIAGHSFLTYLSKKRGVFDAVFQHSRHLNDFPVQY
MUL_0094|M.ulcerans_Agy99 IML-PQFISVEQQEDIIAGHSFLTYLSKKRGVFDAVFQHSRHLNDFPVQY
Mb3808|M.bovis_AF2122/97 VML-PQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQY
Rv3779|M.tuberculosis_H37Rv VML-PQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQY
MLBr_00116|M.leprae_Br4923 ILA-PQFIAVLNQADIIAGHSFPSFKSVKQGVIDALLLHTRHLNDFPIQY
MAB_0205c|M.abscessus_ATCC_199 VLLYPQLRTLMQLSEIIAGHQFTTPWGKKRALLDALTQHTRHLADYPVQS
:: **: :: : :***** * : . *:.::**: *:*** *:*:*
MMAR_5334|M.marinum_M ALIALAAIGGFILLIKKIWWPLAVWVLLVVMNVNAGTPLGGPIDAMAGAL
MUL_0094|M.ulcerans_Agy99 ALIALAAIGGFILLIKKIWWPLAVWLLLVVMNVNAGTPLGGPIDAMAGSL
Mb3808|M.bovis_AF2122/97 ALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGAL
Rv3779|M.tuberculosis_H37Rv ALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGAL
MLBr_00116|M.leprae_Br4923 GLVVLAAIGMAILLYQKIWWPSIAWLVLTVATVYSAAPFRGPIGSAIESF
MAB_0205c|M.abscessus_ATCC_199 ALLGLALIGAVVLIVKRVYWPVAVWLLLVIAIVHSSKPFGGFVGHAVALF
.*: ** ** :*: ::::** .*::* : * :. *: * :. :
MMAR_5334|M.marinum_M GEFFYNDPRRIAAATTLLLMLMAGVALFWIVTLVVTAAQGLTDRFRPLPQ
MUL_0094|M.ulcerans_Agy99 GEFFYNDPRRIAAATTLLLMLMAGVALFWIVTLVVAAARGLTDRFRPLPQ
Mb3808|M.bovis_AF2122/97 GEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPV
Rv3779|M.tuberculosis_H37Rv GEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPV
MLBr_00116|M.leprae_Br4923 SQFFYNDPRRLSAVVTMLLTPMAGIALFAGVLLLVVGARRVTARFTALPR
MAB_0205c|M.abscessus_ATCC_199 SDAFYSDPRRLSAIVCLLLAPAAGIGLFALAAAALATLR--RARKTRADS
.: ** ****::* . :** **:.** . :. : *
MMAR_5334|M.marinum_M PFWVSVTVALLLGVCLVSTWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYL
MUL_0094|M.ulcerans_Agy99 PFWVSVTVALLLGVCLVSTWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYL
Mb3808|M.bovis_AF2122/97 SVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYL
Rv3779|M.tuberculosis_H37Rv SVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYL
MLBr_00116|M.leprae_Br4923 PVWTTATVVLLVAATVLTAWHYLFRHLVLFGDKYDSVMVNQKDLDAMSYL
MAB_0205c|M.abscessus_ATCC_199 RWTLVAAAIVLAAICGFSARHYFLPHKYLVGAKYDQVMVGPKKLDAFAYL
.:. :* . .:: **: * *.* ***.**:. *.***::**
MMAR_5334|M.marinum_M ATLPGARDTMIGNANTDGTAWMYAVAGLHPLWTHYDYPVQQGPGYHRFIV
MUL_0094|M.ulcerans_Agy99 ATLPGARDTMIGDANTDGTAWMYAVAGLHPLWTHYDYPVQQGPGYHRFIF
Mb3808|M.bovis_AF2122/97 ASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIF
Rv3779|M.tuberculosis_H37Rv ASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIF
MLBr_00116|M.leprae_Br4923 ATLPGAHNTIIGNSNTDGSSWMYAVADLHPLWTHYDFPQQTGPGYFRYAF
MAB_0205c|M.abscessus_ATCC_199 ATLPGAKTTTIGDGNVDGSGWMYAVAGLHPLWTHYDFPQQQGPGYHRYIF
*:****: * **:.*.**:.******.*********:* * ****.*: .
MMAR_5334|M.marinum_M WAYAGRGDSDPRVVESIKVLNIRYILTSSPTVRGFAVPDGLVSLENSPSW
MUL_0094|M.ulcerans_Agy99 WAYAGRGDSDPRVVESIKVLNIRYILTSSPTVRGFAVPDGLVSLENSPSW
Mb3808|M.bovis_AF2122/97 WAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSW
Rv3779|M.tuberculosis_H37Rv WAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSW
MLBr_00116|M.leprae_Br4923 WAYARTG--NPWVVEAVRVFNIRYILTTSPTVQGFAIPDGLVSLEESKSW
MAB_0205c|M.abscessus_ATCC_199 WAYADDADTDRRVTEAVHALNIRYVMTSTPVVQGFKVPDGLRSLDISRSW
***. . : * *:::.:.***::*::*.*:** :**** **: * **
MMAR_5334|M.marinum_M KKIYDNGGARIYEWSGKTAQTHSK--
MUL_0094|M.ulcerans_Agy99 KKIYDNGGARIYEWSGKTAQTHSK--
Mb3808|M.bovis_AF2122/97 AKIYDNGEARIYEWRGTAAATHS---
Rv3779|M.tuberculosis_H37Rv AKIYDNGEARIYEWRGTAAATHS---
MLBr_00116|M.leprae_Br4923 TKIYDNGAARIFEWSGNATATRA---
MAB_0205c|M.abscessus_ATCC_199 RKLYDNGAAQIYEWVGDRKPDAEGDK
*:**** *:*:** *