For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SGGSKPTANASTPKLPKRWSEETRTALVRRARRMNRKLAQAFPHVYCELDFTSPLELAVATILSAQSTDK RVNLTTPDLFVKYQTALDYAQADRAELENLIRPTGFYRNKANSLIGLGQALVERFDGQVPATMEELVTLP GVGRKTANVILGNAFDVPGITVDTHFGRLARRWRWTAEEDPVKVEHAVGELIERKEWTLLSHRVIFHGRR VCHARKPACGVCVLAKDCPSYGLGPTEPLLAAPLVQGPETEHLLAMAGL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5162 | nth | - | 100% (260) | endonuclease III Nth |
M. marinum M | MMAR_5089 | mutY | 7e-09 | 30.17% (179) | adenine glycosylase MutY |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3698c | nth | 1e-127 | 88.57% (245) | endonuclease III |
M. gilvum PYR-GCK | Mflv_1373 | - | 1e-123 | 81.71% (257) | endonuclease III |
M. tuberculosis H37Rv | Rv3674c | nth | 1e-127 | 88.57% (245) | endonuclease III |
M. leprae Br4923 | MLBr_02301 | nth | 1e-124 | 87.24% (243) | putative endonuclease III |
M. abscessus ATCC 19977 | MAB_0418 | - | 1e-120 | 79.46% (258) | endonuclease III protein |
M. avium 104 | MAV_0455 | nth | 1e-114 | 84.91% (232) | endonuclease III |
M. smegmatis MC2 155 | MSMEG_6187 | nth | 1e-122 | 82.56% (258) | endonuclease III |
M. thermoresistible (build 8) | TH_2130 | nth | 1e-106 | 85.58% (215) | PROBABLE ENDONUCLEASE III NTH (DNA-(APURINIC OR APYRIMIDINIC |
M. ulcerans Agy99 | MUL_4248 | nth | 1e-134 | 99.57% (233) | endonuclease III Nth |
M. vanbaalenii PYR-1 | Mvan_5433 | - | 1e-128 | 85.88% (255) | endonuclease III |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1373|M.gilvum_PYR-GCK -----MTVSEPSTGAKSARRSARKWDRETHLGLVRRARRMNRTLTQAFPH Mvan_5433|M.vanbaalenii_PYR-1 -----MTVK-PARGA-SPRKSGRKWDEETHLGLVRRARRMNRTLAQAFPH MSMEG_6187|M.smegmatis_MC2_155 -----MSAG-AARAAKPKKSDAKKWDSETHLGLVRRARRMNRTLAKAFPH TH_2130|M.thermoresistible__bu -------------------------------------------------- MMAR_5162|M.marinum_M -----MSGGSKPTANASTPKLPKRWSEETRTALVRRARRMNRKLAQAFPH MUL_4248|M.ulcerans_Agy99 --------------------------------MVRRARRMNRKLAQAFPH MLBr_02301|M.leprae_Br4923 ------------MPLTPGVDVARRWSGETRLGLVRRARRMNRALAQAFPH MAV_0455|M.avium_104 ---------------------------------MRRARRMNRILAQAFPE Mb3698c|M.bovis_AF2122/97 --------------------MPGRWSAETRLALVRRARRMNRALAQAFPH Rv3674c|M.tuberculosis_H37Rv --------------------MPGRWSAETRLALVRRARRMNRALAQAFPH MAB_0418|M.abscessus_ATCC_1997 MPTTGSAAKPRAKSSVKAPAPVRAWKPETHTGLVRRARRMNRTLAQAFPH Mflv_1373|M.gilvum_PYR-GCK VYCELDFTNPLELTVATILSAQSTDKRVNLTTPALFAKYRTARDYATADR Mvan_5433|M.vanbaalenii_PYR-1 VYCELDFTDPLELTVATILSAQSTDKRVNLTTPALFKKYRTARDYATADR MSMEG_6187|M.smegmatis_MC2_155 VYCELDFTNPLELTVATILSAQSTDKRVNLTTPALFKKYRTALDYAQADR TH_2130|M.thermoresistible__bu VYCELDFTNPLELTVATILSAQSTDKRVNLTTPALFRKYRTALDYAQADR MMAR_5162|M.marinum_M VYCELDFTSPLELAVATILSAQSTDKRVNLTTPDLFVKYQTALDYAQADR MUL_4248|M.ulcerans_Agy99 VYCELDFTSPLELAVATILSAQSTDKRVNLTTPDLFAKYQTALDYAQADR MLBr_02301|M.leprae_Br4923 VYCELDFTSPLELTVATILSAQSTDKRVNLTTPAVFARYRSALDYMQADR MAV_0455|M.avium_104 AHCELDFTTPLELTVATILSAQSTDKRVNLTTRALFKRYTCALDYAQADR Mb3698c|M.bovis_AF2122/97 VYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADR Rv3674c|M.tuberculosis_H37Rv VYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADR MAB_0418|M.abscessus_ATCC_1997 VYCELDFTNPLELAVATILSAQCTDVRVNMVTPALFAKYRTAEDYAGANR .:****** ****:********.** ***:.* :* :* * ** *:* Mflv_1373|M.gilvum_PYR-GCK TELEELIRPTGFYRNKATSLIGLGQALEERFDGEVPRTLDELVTLPGIGR Mvan_5433|M.vanbaalenii_PYR-1 TELEELIRPTGFYRNKANSLIGLGQALEERFDGQVPRTLDELVTLPGVGR MSMEG_6187|M.smegmatis_MC2_155 TELEELIRPTGFYRNKANSLIKLGQELVERFDGEVPKTLDELVTLPGVGR TH_2130|M.thermoresistible__bu AELEELIRPTGFFRTKANSLIRLGQELVERFDGEVPDNLEDLVTLPGVGR MMAR_5162|M.marinum_M AELENLIRPTGFYRNKANSLIGLGQALVERFDGQVPATMEELVTLPGVGR MUL_4248|M.ulcerans_Agy99 AELENLIRPTGFYRNKANSLIGLGQALVERFDGQVPATMEELVTLPGVGR MLBr_02301|M.leprae_Br4923 AELENFIRPTGFFRNKAASLIRLGQALVERFDGEVPSTMVDLFTLPGVGR MAV_0455|M.avium_104 DELENLIRPTGFFRNKASALIRLGQALVERFDGEVPATMAELVTLPGVGR Mb3698c|M.bovis_AF2122/97 TELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGR Rv3674c|M.tuberculosis_H37Rv TELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGR MAB_0418|M.abscessus_ATCC_1997 AELEEMIRTTGFYRNKANSIMGLGTQLVERFGGEIPPRLKDLVTLPGIGR ***.:**.***:*.** ::: ** * ***.*::* : .*.****:** Mflv_1373|M.gilvum_PYR-GCK KTANVVLGNAFDIPGITVDTHFGRLVRRWRWTAEEDPVKVEHIVGDLIER Mvan_5433|M.vanbaalenii_PYR-1 KTANVILGNAFDIPGITVDTHFGRLVRRWRWTAEEDPVKVEHIVGELIER MSMEG_6187|M.smegmatis_MC2_155 KTANVILGNAFDIPGITVDTHFGRLVRRWRWTDHEDPVKVEFAVAELIER TH_2130|M.thermoresistible__bu KTANVILGNAFDVPGITVDTHFGRLVRRWRWTDERDPVKVEHAVGKLIER MMAR_5162|M.marinum_M KTANVILGNAFDVPGITVDTHFGRLARRWRWTAEEDPVKVEHAVGELIER MUL_4248|M.ulcerans_Agy99 KTANVILGNAFDVPGITVDTHFGRLARRWRWTAEEDPVKVEHAVGELIER MLBr_02301|M.leprae_Br4923 KTANVILGNAFGIPGITVDTHFGRLVRRWRWTAEEDPVKVEHAVGELIER MAV_0455|M.avium_104 KTANVILGNAFGVPGITVDTHFARLVHRWRWTAEKDPVKIEHAVGELIER Mb3698c|M.bovis_AF2122/97 KTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIER Rv3674c|M.tuberculosis_H37Rv KTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPVKVEQAVGELIER MAB_0418|M.abscessus_ATCC_1997 KTANVILGNAFDIPGITVDTHFGRLVRRWRWTEEEDPVKVEHLVGELIER *****:*****.:*********.**.:***** .****:* *..**** Mflv_1373|M.gilvum_PYR-GCK SEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGTGPTDPLIAAAL Mvan_5433|M.vanbaalenii_PYR-1 SEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGAGPTDPLIAAPL MSMEG_6187|M.smegmatis_MC2_155 SEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGIGPTDPPTAAAL TH_2130|M.thermoresistible__bu REWTLLSHRVIFHGRRVCHARKPACGVCVLADDCPSYGIGETDKLAAAEL MMAR_5162|M.marinum_M KEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTEPLLAAPL MUL_4248|M.ulcerans_Agy99 KEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTEPLLAAPL MLBr_02301|M.leprae_Br4923 DQWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSFGLGPTEPLLAAPL MAV_0455|M.avium_104 SEWTMLSHRVIFHGRRVCHSRKPACGVCLLARDCPSFGLGPTEPPLAAQL Mb3698c|M.bovis_AF2122/97 KEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPL Rv3674c|M.tuberculosis_H37Rv KEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPL MAB_0418|M.abscessus_ATCC_1997 KEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTDPEVAAPL :**:**************:*:******:** ****:* * *: ** * Mflv_1373|M.gilvum_PYR-GCK VKGPETEHLLALAGL Mvan_5433|M.vanbaalenii_PYR-1 VKGPETEHLLALAGL MSMEG_6187|M.smegmatis_MC2_155 VKGPETEHLLALAGL TH_2130|M.thermoresistible__bu VRGPERDHLLALAGL MMAR_5162|M.marinum_M VQGPETEHLLAMAGL MUL_4248|M.ulcerans_Agy99 VQGPETEHLLAMAGL MLBr_02301|M.leprae_Br4923 VQGPEAGHLLALAGL MAV_0455|M.avium_104 VRGPETEHLLALAGL Mb3698c|M.bovis_AF2122/97 VQGPETDHLLALAGL Rv3674c|M.tuberculosis_H37Rv VQGPETDHLLALAGL MAB_0418|M.abscessus_ATCC_1997 VKGPETEHLLALAGL *:*** ****:***