For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRLRFGRPDLKRYSHRFGVPAAKPDAPLSAMWIGVSTVLLDDGSSALMTDGYFSRPSLAQVAAGKLAPSA ARVDGCLAQAKASELAAVIPVHTHIDHAMDSALVADRTGALLVGGESAANIGRGYGLAEDRLVVAVPGQS MELGGYDVTLIESHHCPPDRFPGVISEPVVPPVKASAYRCGEAWSTHIHHRPSGRRLLIQGSAGFVAGAL DGYRAEVVYLGVGQLGLQRRSYLIDYWNEVVRAVAARRVVLVHWDDFFRPLSKPMRAFPYAADDLDMSIR ILDELAAQDGIPLQMPTVWQREDPWV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5077 | - | - | 100% (306) | hypothetical protein MMAR_5077 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3608 | - | 1e-137 | 78.82% (288) | hypothetical protein Mb3608 |
M. gilvum PYR-GCK | Mflv_1449 | - | 1e-108 | 61.44% (306) | hypothetical protein Mflv_1449 |
M. tuberculosis H37Rv | Rv3577 | - | 1e-137 | 78.82% (288) | hypothetical protein Rv3577 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0960 | - | 6e-05 | 28.36% (134) | hypothetical protein MAB_0960 |
M. avium 104 | MAV_0579 | - | 1e-133 | 71.80% (305) | hypothetical protein MAV_0579 |
M. smegmatis MC2 155 | MSMEG_6071 | - | 1e-119 | 64.38% (306) | metallo-beta-lactamase superfamily protein |
M. thermoresistible (build 8) | TH_1750 | - | 1e-119 | 65.25% (305) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4153 | - | 1e-177 | 99.02% (306) | hypothetical protein MUL_4153 |
M. vanbaalenii PYR-1 | Mvan_5335 | - | 1e-111 | 60.98% (305) | hypothetical protein Mvan_5335 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5077|M.marinum_M -----------------------------------MRLRFGRPDLKRYSH MUL_4153|M.ulcerans_Agy99 -----------------------------------MRLRFGRPDLKRYSH Mb3608|M.bovis_AF2122/97 -------------------------------------MPTARSDAP---- Rv3577|M.tuberculosis_H37Rv -------------------------------------MPTARSDAP---- MAV_0579|M.avium_104 -----------------------------------MRLRLGRPDITRYAD Mflv_1449|M.gilvum_PYR-GCK -----------------------------------MRCKPGRPDLDAYAT Mvan_5335|M.vanbaalenii_PYR-1 -----------------------------------MRLKLGRPDLQAYSA MSMEG_6071|M.smegmatis_MC2_155 -----------------------------------MRLKPGRPDLADHAR TH_1750|M.thermoresistible__bu -----------------------------------MRIRPGRPSLTPYAH MAB_0960|M.abscessus_ATCC_1997 MRALWVGAGAAIASTWIGRALRDVPQTLGASKGRIAEVAKGSPQYRGGTF . .. MMAR_5077|M.marinum_M RFGVPA---AKPDAPLSAMWIGVSTVLLDD-------------GSSALMT MUL_4153|M.ulcerans_Agy99 RFGVPA---AKPDAPLSAMWIGVSTVLLDD-------------GSSALMT Mb3608|M.bovis_AF2122/97 ---------------LSVTWMGVATLLVDD-------------GSSALMT Rv3577|M.tuberculosis_H37Rv ---------------LSVTWMGVATLLVDD-------------GSSALMT MAV_0579|M.avium_104 RFDVPA---AGPGG-LSVTWLGVASLLIDD-------------GSSALLT Mflv_1449|M.gilvum_PYR-GCK YFDLPA---ATPASPVTVSWAGVTTLLIND-------------GTSALMT Mvan_5335|M.vanbaalenii_PYR-1 YFDLPP---APPGAPVTVTWAGVTTLLVDD-------------GESAVMT MSMEG_6071|M.smegmatis_MC2_155 FFDAPT---ATPDSPVTVTWAGVTTLLVDD-------------GTSALLT TH_1750|M.thermoresistible__bu RFDVPA---AAATSRLTVTWAGVTTLLIDD-------------GKSALLT MAB_0960|M.abscessus_ATCC_1997 HNAEPARQFSPDAETTTVVWDVLTRRGVGTPKGQVPLAVPELSGPPADLA :. * :: :. * .* :: MMAR_5077|M.marinum_M DGYFSRPSLAQVAAG-KLAPSAARVDGCLAQ---------------AKAS MUL_4153|M.ulcerans_Agy99 DGYFSRPSLAQVAAG-KLAPSAARVDGCLAQ---------------AKAS Mb3608|M.bovis_AF2122/97 DGYFSRPGLARVAAG-KVSPSAERVDGCLAR---------------ANVS Rv3577|M.tuberculosis_H37Rv DGYFSRPGLARVAAG-KVSPSAERVDGCLAR---------------ANVS MAV_0579|M.avium_104 DGYFSRPGLARVVAG-KVSPSPPRVDGCLAR---------------AKVS Mflv_1449|M.gilvum_PYR-GCK DGFFSRPGLLRVATRRPLASSDSRIDAALQR---------------LGVT Mvan_5335|M.vanbaalenii_PYR-1 DGFFSRPSHLSVAAR-PLRSSRSRIDDALSR---------------LGVR MSMEG_6071|M.smegmatis_MC2_155 DGFFSRPGLLTVGLR-PLAPNVPRIDGCLAR---------------LGVD TH_1750|M.thermoresistible__bu DGFFSRPALATVALR-RLEPDTARIEGSLAR---------------LRLH MAB_0960|M.abscessus_ATCC_1997 ATWFGHSSVLVEIDGYRVLTDPVWSDRCSPSRVVGPHRQHPVPVELSALP :*.:.. : .. : . MMAR_5077|M.marinum_M ELAAVIPVHTHIDHA-MDSALVADRTG-ALLVGGESAANIGRGYGLAEDR MUL_4153|M.ulcerans_Agy99 ELAAVIPVHTHIDHA-MDSALVADRTG-ALLVGGESAANIGRGYGLADDR Mb3608|M.bovis_AF2122/97 RLTAVIPVHTHIDHA-MDSALVADRTG-AQLVGGESAANVGRGYGLPEES Rv3577|M.tuberculosis_H37Rv RLTAVIPVHTHIDHA-MDSALVADRTG-AQLVGGESAANVGRGYGLPEES MAV_0579|M.avium_104 RLEAVIPVHTHFDHA-LDSALVADRTG-ALLVGGESAANVGRGYGLPEDR Mflv_1449|M.gilvum_PYR-GCK RLDGVTPVHTHFDHA-MDSAAVAGRTG-ARLIGGSSAAHIGRGHGL--DR Mvan_5335|M.vanbaalenii_PYR-1 RLDAVTPVHTHYDHA-MDSAVVADLTG-ARLIGGRSAAAIGRGHGL--DR MSMEG_6071|M.smegmatis_MC2_155 RLAAVLPVHTHFDHA-MDSAVVAERTG-AALVGGSSAAQIGIGGGLPDDR TH_1750|M.thermoresistible__bu RLAAVIPVHTHYDHV-LDSPAVADRTG-AVLIGGASAAQVGRGAGLPDDR MAB_0960|M.abscessus_ATCC_1997 ALDAVVISHDHYDHLDMDSIIALTRSQNAVFVVPLGVGAHLRGWGVSPAR * .* * * ** :** . : * :: ... * *: MMAR_5077|M.marinum_M LVVAVPGQSMELGGYDVTLIESHHCPPDRFPGVISEPVVPPVKASAYRCG MUL_4153|M.ulcerans_Agy99 LVVAVPGQSMELGAYDVTLIESHHCPPDRFPGVISEPVVPPVKASAYRCG Mb3608|M.bovis_AF2122/97 LVVAVPGEPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAYRCG Rv3577|M.tuberculosis_H37Rv LVVAVPGEPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAYRCG MAV_0579|M.avium_104 IVVAADGEPIRLGAFDVTLVKSHHCPPDRFPGVIAEPLIPPARASAYRCG Mflv_1449|M.gilvum_PYR-GCK VEVVTSGDATAVGAFDVTLIESHHCPPDRFPGAITAPVAPRASVSAYRCG Mvan_5335|M.vanbaalenii_PYR-1 VDVVAPAETVSVGSYDITLVEGSHCPPDRFPGTITAPVISPARVSAYRCG MSMEG_6071|M.smegmatis_MC2_155 IVTVTPGEPVAMEAYDVTLFVSEHCPPDRFPGVITEPVVPPAKASAYKCG TH_1750|M.thermoresistible__bu IVVAADGASVSAGSFDITLIDTGHCPPDRFPGTIDAPVAPPARVSAYRCG MAB_0960|M.abscessus_ATCC_1997 VIELDWDQSHQLGKLTLTCTQARHFSGR------SITRNTTLWASWAFAG : . :* * . . . .* .* MMAR_5077|M.marinum_M EAWSTHIHHRPSGRRLLIQGSAGFVAGALDGYRAEVVYLGVGQLGLQRRS MUL_4153|M.ulcerans_Agy99 EAWSTHIHHRPSGRRLLIQGSAGFVAGALDGYRAEVVYLGVGQLGLQRRS Mb3608|M.bovis_AF2122/97 EAWSTLVHHRPSGRRLLIQDSAGFVSGALAGYRADAAYLSVGQLGLQPPS Rv3577|M.tuberculosis_H37Rv EAWSTLVHHRPSGRRLLIQDSAGFVSGALAGYRADAAYLSVGQLGLQPPS MAV_0579|M.avium_104 ESWSTLVRHRPTGRRLLICGSAGFVPGALAGQRAGAAYLSVGQLGLRPRS Mflv_1449|M.gilvum_PYR-GCK EAWSTLVRHRGTGRGLLIVGSAGFVPGALAGRHADVVYLGVGQLGLQPHD Mvan_5335|M.vanbaalenii_PYR-1 EAWSTLVHHRPTGVGLLVVGSAGFVPDALAGRRADVVYLGVGQLGLQPEG MSMEG_6071|M.smegmatis_MC2_155 EAWSTLVHHRPSDRRVLIVGSAGAVPGALAGQRADVVYLGVGQLGRQPER TH_1750|M.thermoresistible__bu EAWSLLVGHRPSGRRLLIVGSAGFRRGALAGQHAEVAYLGVGQLGLQPER MAB_0960|M.abscessus_ATCC_1997 PKHKVFFGGDTGYTKAFKVIGDTYGPFDLTLLPVGAYNTSWADIHMNPEE . . : . * . . . .:: . MMAR_5077|M.marinum_M YLIDYWNEVVRAVAARRVVLVHWDDFFRPLSKPMRAFPYAADDLDMSIRI MUL_4153|M.ulcerans_Agy99 YLIDYWNEVVRAVAARRVVLVHWDDFFRPLSKPMRAFPYAADDLDMSIRI Mb3608|M.bovis_AF2122/97 YLLEYWTETVRTVGVRRVILIHWDDFFRPLSKPLRALPYAADDLDLSIRI Rv3577|M.tuberculosis_H37Rv YLLEYWTETVRTVGVRRVILIHWDDFFRPLSKPLRALPYAADDLDLSIRI MAV_0579|M.avium_104 YLDEYWDQTVRTVGARRVILIHWDDFFRPLSKPLRALPYAGDDLDSSIRV Mflv_1449|M.gilvum_PYR-GCK YLAAYWTETVRTVGARRVVLIHWDDFFRPLDKPLRALPFVADNLDVSMRI Mvan_5335|M.vanbaalenii_PYR-1 YLVDYWTQTVRTVGARQVVLIHWDDFFRPLDKPLRSLPFAVDDLDVSMRV MSMEG_6071|M.smegmatis_MC2_155 YLTDYWTQTVRTVGARRVVLIHWDDFFRPLHRPLRALPYVADDLDATMRV TH_1750|M.thermoresistible__bu YLVDYWTETVRTVGARRVVLTHWDDFFRPLHRPVRALPYAADDLDFSMRV MAB_0960|M.abscessus_ATCC_1997 AVQTHLDLATAQAPLLPIHWATFNLALHPWAEPIERVLAAAEEQGVTVVA : : .. . : :: ::* .*:. . . :: . :: MMAR_5077|M.marinum_M LDELAAQDGIPLQMPTVWQREDPWV-------- MUL_4153|M.ulcerans_Agy99 LDELAAQDGIPLQMPTVWQREDHWV-------- Mb3608|M.bovis_AF2122/97 LDELAAQDGVALQMPTVWRREDPWM-------- Rv3577|M.tuberculosis_H37Rv LDELAAQDGVALQMPTVWRREDPWM-------- MAV_0579|M.avium_104 LDELAERDGVALHLPSVWRREDPWA-------- Mflv_1449|M.gilvum_PYR-GCK LARLAREDGVDLHLPTLWERADPWR-------- Mvan_5335|M.vanbaalenii_PYR-1 LSRLAAEDGVGLHLPTLWQPAAPWS-------- MSMEG_6071|M.smegmatis_MC2_155 LTTLAAHDGVALHLPTLWQRSDPWIETGSGPWR TH_1750|M.thermoresistible__bu LGGLAETDGIPLHLPTVWQRTDPWR-------- MAB_0960|M.abscessus_ATCC_1997 PRPGQRADARQPAAPDGWWRLT----------- *. * *