For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_4690 (-)

annotation: lipoprotein
coordinates: 5743423 - 5743845
length: 140

RNLIKLAFVCVLASAGLTGCGSSSGSQLASTASMTVNGADVHPRVVRCTQIEWYRTIQIGDQASGVRVLI
DQGARPMIAKSVRITNLGGFTGMYAQGDGGDAGLHFSDGRFTITGNADGYNTDKPAEPTTAAFRISVNC*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_4690--100% (140)lipoprotein
M. marinum MMMAR_2769lppE2e-1733.58% (137) lipoprotein LppE
M. marinum MMMAR_5315lpqH9e-0732.63% (95) 19 kDa lipoprotein antigen precursor LpqH

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1913clppE1e-1228.47% (137) lipoprotein LppE
M. gilvum PYR-GCKMflv_3293-8e-1734.75% (141) hypothetical protein Mflv_3293
M. tuberculosis H37RvRv1881clppE1e-1228.47% (137) lipoprotein LppE
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2379-6e-0826.35% (148) lipoprotein LpqH precursor
M. avium 104MAV_0969-4e-3247.86% (140) hypothetical protein MAV_0969
M. smegmatis MC2 155-----
M. thermoresistible (build 8)TH_3147-1e-1435.34% (133) PUTATIVE putative conserved hypothetical protein
M. ulcerans Agy99MUL_0309-3e-7596.43% (140) lipoprotein
M. vanbaalenii PYR-1Mvan_3018-3e-1736.72% (128) hypothetical protein Mvan_3018

CLUSTAL 2.0.9 multiple sequence alignment


Mb1913c|M.bovis_AF2122/97           -----MCNRLVTVTGVAMVVAAGLSACG-------------------QAQ
Rv1881c|M.tuberculosis_H37Rv        -----MCNRLVTVTGVAMVVAAGLSACG-------------------QAQ
MMAR_4690|M.marinum_M               ------MRNLIKLAFVCVLASAGLTGCGS------------------SSG
MUL_0309|M.ulcerans_Agy99           ------MRNPIKLAFVCLLASAGLTGCGS------------------SSG
MAV_0969|M.avium_104                ------MRNRF-VAAGAALTVALLGACTS------------------RPP
Mflv_3293|M.gilvum_PYR-GCK          --MLT---RHLMVAVAGSALVLGVAGCST------------------PEP
Mvan_3018|M.vanbaalenii_PYR-1       --MKTRVPRHFVAALIGGGAVLGVAGCST------------------PEP
TH_3147|M.thermoresistible__bu      VGIRVAPNRGPWTLALLAAVGL-AAGCSA------------------APS
MAB_2379|M.abscessus_ATCC_1997      ----MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVSAEGGA
                                                             .*                       

Mb1913c|M.bovis_AF2122/97           TVPRKAARLTIDG-VTHTTRPATCSQEHSYRTIDIRNHDSTVQAVVLLSG
Rv1881c|M.tuberculosis_H37Rv        TVPRKAARLTIDG-VTHTTRPATCSQEHSYRTIDIRNHDSTVQAVVLLSG
MMAR_4690|M.marinum_M               SQLASTASMTVNGADVH-PRVVRCTQIEWYRTIQIGDQASGVRVLIDQGA
MUL_0309|M.ulcerans_Agy99           SQLASTASMTVNGADVQ-PRVVRCTQIEWYRTIQIGDQASGVRILIDQGA
MAV_0969|M.avium_104                AQLSSTASVTVDGKDRN-FHIVTCRQLEWRRMIDIGADFSGAKVAVDENA
Mflv_3293|M.gilvum_PYR-GCK          ALGGTTATVSIDGKDTGGAHVVRCHQSGWSWFIETPDEENGFVAVVST-G
Mvan_3018|M.vanbaalenii_PYR-1       ALGGTTATVTIDGSDTGGAHAVRCRQNGWSWYIDTTEKDNGFTAVLST-G
TH_3147|M.thermoresistible__bu      ALGDSTAEVKINGEAAGGPYPVTCSQNGWAWTVQTQQQDTGFTAVFDT-E
MAB_2379|M.abscessus_ATCC_1997      AAMNSSAKVVVDGKEKKVEGAIACSTAAGQVNIGMGAGMQAIAVVLSD-G
                                    :   .:* : ::*          *        :            .    

Mb1913c|M.bovis_AF2122/97           DRVIPQWVKIRNVDGFNGSFWHGG-VGNARADRARNTYTVAGSAYGISSK
Rv1881c|M.tuberculosis_H37Rv        DRVIPQWVKIRNVDGFNGSFWHGG-VGNARADRARNTYTVAGSAYGISSK
MMAR_4690|M.marinum_M               RPMIAKSVRITNLGGFTGMYAQGD-GGDAGLHFSDGRFTITGNADGYNTD
MUL_0309|M.ulcerans_Agy99           RPMIAKSVRITNLGGFTGMYAQGD-GGDAGLHFSDGRFTITRNADGYNTD
MAV_0969|M.avium_104                QPPVVESVHIQNLSGFSGMYSRGG-SGSADMSMTGDKFTISGTADGYKTD
Mflv_3293|M.gilvum_PYR-GCK          EKVTAESVNFRGFGGFTGSFWADN-IGDAEVSSDGGSFTISGTADGAFDD
Mvan_3018|M.vanbaalenii_PYR-1       GDVTAESVDFRGVGGFTGSFWADN-IGDAEVTGRDGSYTITGKADGTFAG
TH_3147|M.thermoresistible__bu      PEMTAQSVEITGLNGFTGSFWAGT-VGKGRAGVANGKFRISGTAVGSFAD
MAB_2379|M.abscessus_ATCC_1997      DSPKVTSVGLGNIDGVTLGFADGAPGGKATATKDGKKYTVTGTATGVDTA
                                           * : ...*..  :  .   *..        : :: .* *    

Mb1913c|M.bovis_AF2122/97           KPNTVVSTDFNILAEC-
Rv1881c|M.tuberculosis_H37Rv        KPNTVVSTDFNILAEC-
MMAR_4690|M.marinum_M               KPAEPTTAAFRISVNC-
MUL_0309|M.ulcerans_Agy99           KPAEPTTAAFRISVNC-
MAV_0969|M.avium_104                KPGEPATATFKIVVTC-
Mflv_3293|M.gilvum_PYR-GCK          TPSEAVSAKFRIEADC-
Mvan_3018|M.vanbaalenii_PYR-1       KPSEAVTAEFRIQANC-
TH_3147|M.thermoresistible__bu      NPTDTVDAEFSIEARC-
MAB_2379|M.abscessus_ATCC_1997      NPMQPIEKPFEIEVTCP
                                    .*       * * . *