For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTGSVVCTTAAGNVNIAIGGAATGIAAVLTDANPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSSY KISGTATGVDMANPMSPVNKPFEINVTCP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5315 | lpqH | - | 100% (99) | 19 kDa lipoprotein antigen precursor LpqH |
M. marinum M | MMAR_5244 | - | 1e-11 | 39.00% (100) | 19 kDa lipoprotein antigen precursor LpqH-like protein |
M. marinum M | MMAR_4690 | - | 5e-07 | 32.63% (95) | lipoprotein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3789 | lpqH | 1e-49 | 94.90% (98) | 19 kDa lipoprotein antigen precursor LPQH |
M. gilvum PYR-GCK | Mflv_1226 | - | 1e-35 | 68.69% (99) | lipoprotein antigen family protein |
M. tuberculosis H37Rv | Rv3763 | lpqH | 1e-49 | 94.90% (98) | 19 kDa lipoprotein antigen precursor LPQH |
M. leprae Br4923 | MLBr_01966 | lpqH | 8e-19 | 44.90% (98) | putative lipoprotein |
M. abscessus ATCC 19977 | MAB_2379 | - | 3e-32 | 59.60% (99) | lipoprotein LpqH precursor |
M. avium 104 | MAV_0306 | - | 1e-45 | 85.71% (98) | lipoprotein LpqH |
M. smegmatis MC2 155 | MSMEG_6316 | - | 2e-28 | 53.00% (100) | lipoprotein LpqH |
M. thermoresistible (build 8) | TH_1652 | - | 1e-26 | 55.00% (100) | lipoprotein LpqH |
M. ulcerans Agy99 | MUL_4389 | lpqH | 2e-53 | 100.00% (99) | 19 kDa lipoprotein antigen precursor LpqH |
M. vanbaalenii PYR-1 | Mvan_5582 | - | 3e-37 | 71.72% (99) | hypothetical protein Mvan_5582 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5315|M.marinum_M -------------------------------------------------- MUL_4389|M.ulcerans_Agy99 MKR-GPTVAVAGAAILVAGLSGCSS--NKSTTSGGESSSTGS-------- Mb3789|M.bovis_AF2122/97 MKR-GLTVAVAGAAILVAGLSGCSS--NKSTTGSGETTTAAG-------- Rv3763|M.tuberculosis_H37Rv MKR-GLTVAVAGAAILVAGLSGCSS--NKSTTGSGETTTAAG-------- MAV_0306|M.avium_104 MKR-QLTIAVAGAAILAAGVSGCSSG-NKSAPSSSASSSSTS-------- Mflv_1226|M.gilvum_PYR-GCK MNR-HFVVALGGAALVIAGLSGCGGS-DKSETTG---------------- Mvan_5582|M.vanbaalenii_PYR-1 MKR-EILVAVGGAAIVMAGLSGCG-S-DKSETSG---------------- TH_1652|M.thermoresistible__bu MYR-GLLAAIGGAALVVAGLAGCSSN-DEGSTAADETTTGEAVDEVIVEE MSMEG_6316|M.smegmatis_MC2_155 MKR-GFLVAVGSAALVVAGLSGCSSD-DKSAEASEASPTANATVDSTASP MAB_2379|M.abscessus_ATCC_1997 MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVS--------- MLBr_01966|M.leprae_Br4923 MRH-KLLAAIY-AVTIMAGAAGCSGGTQAPTPSVSKTTNSSP-------- MMAR_5315|M.marinum_M ----------------------------MTGSVVCTTAAGNVNIAIGGAA MUL_4389|M.ulcerans_Agy99 -----TSASTGGGQASGTKVLIDGQDQHVTGSVVCTTAAGNVNIAIGGAA Mb3789|M.bovis_AF2122/97 -----TTASPG--AASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGGAA Rv3763|M.tuberculosis_H37Rv -----TTASPG--AASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGGAA MAV_0306|M.avium_104 -----ASASSG--GAAGTKVIIDGKDQNVSGSVVCTNAGGTVNIAIGGAA Mflv_1226|M.gilvum_PYR-GCK ------ETSSAAAAEGKSTVTIDGADQEVTGTVVCSDMGGNTNIAIGDAT Mvan_5582|M.vanbaalenii_PYR-1 ------ETSQAAAAEGKSTVTIDGADQEVQGTVVCSDMGGNTNIAIGDAT TH_1652|M.thermoresistible__bu ---EEETTTTGAAAEGAATVSIDGQEQEIQGTVACTQTGDTVMIAIGDAT MSMEG_6316|M.smegmatis_MC2_155 GTSVAAGDATATTGTGTARVVIDGAEHPIEGSVVCATVAGNVSVTVGQGT MAB_2379|M.abscessus_ATCC_1997 ------AEGGAAAMNSSAKVVVDGKEKKVEGAIACSTAAGQVNIGMGAGM MLBr_01966|M.leprae_Br4923 ---TTVASSIPDAAAGETKVTIGGQPQKVSGPVVCSTTNGKFSIAIGDMI : *.:.*: . : :* MMAR_5315|M.marinum_M TGIAAVLTDANPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSSYKI MUL_4389|M.ulcerans_Agy99 TGIAAVLTDANPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSSYKI Mb3789|M.bovis_AF2122/97 TGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKI Rv3763|M.tuberculosis_H37Rv TGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKI MAV_0306|M.avium_104 TGIAAVLSDGNPPQVKSVGLGNVNGVTLGYTSGTGQGNASAEKNGNSYKI Mflv_1226|M.gilvum_PYR-GCK TGIGAVVSTGDEPTLVSVGLGNVNGVTLGYQSGTGSNDGKVEKDDKTYKI Mvan_5582|M.vanbaalenii_PYR-1 TGIGVVVSTGDDPAVVSVGLGNVNGVTLGYQSGAGQGEAKAEKDGKTYKI TH_1652|M.thermoresistible__bu QGISATVSTGDEPQVSQVALGNVDGVALTYQEGTGQGEAAAEKDGDTYKI MSMEG_6316|M.smegmatis_MC2_155 SAVTATLSEGDQPAVSAVALGNIDGVSLGYTPGVPGGSAEATKDGNKYTI MAB_2379|M.abscessus_ATCC_1997 QAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAPGGKATATKDGKKYTV MLBr_01966|M.leprae_Br4923 TGVIVGLEP-DASVVHNAGLGTIDGVVIAFTEGVPSENANATKNGNTYQI .: . : : . : ..**.::** : : *. .. . *:.. * : MMAR_5315|M.marinum_M SGTATGVDMANP-MSPVNKPFEINVTCP-- MUL_4389|M.ulcerans_Agy99 SGTATGVDMANP-MSPVNKPFEINVTCP-- Mb3789|M.bovis_AF2122/97 TGTATGVDMANP-MSPVNKSFEIEVTCS-- Rv3763|M.tuberculosis_H37Rv TGTATGVDMANP-MSPVNKSFEIEVTCS-- MAV_0306|M.avium_104 TGTATGVDMANP-LQPVNKPFEIDVTCNS- Mflv_1226|M.gilvum_PYR-GCK SGTATGVDMANP-MQPVNKPFEIEVTCP-- Mvan_5582|M.vanbaalenii_PYR-1 SGTATGVDMANP-MAPVNKPFEIEVTCP-- TH_1652|M.thermoresistible__bu TGTATGADIADPGAGMVSKPFEIEVTCPGS MSMEG_6316|M.smegmatis_MC2_155 KGSATGADMANPMAGAVTKPFELEITCP-- MAB_2379|M.abscessus_ATCC_1997 TGTATGVDTANP-MQPIEKPFEIEVTCP-- MLBr_01966|M.leprae_Br4923 TGTASGVDNTGQ---QIHKSFEIEVTCR-- .*:*:*.* :. : *.**:::**