For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_4389 (pra)

annotation: proline-rich antigen, Pra
coordinates: 5396908 - 5397711
length: 267

TDQPPPGGSYPPPPPPPGSSGGSEPPAGGYQAPPPPSAPSGGGYPPPPPPPSPSTSGYPPPPPPPSAPGG
SAYPPPPPPPPLEGGYPPPPPPSAGGYAPPPPGPAIRALPAESYTPWITRVLAALIDFAPYVVVTGIGWL
IMMVTTTSSCVTDISQYDIGQYCVSQPSMIGQLAQWLLSLVGLAYLVWDYGYRQGTTGSSIGKSIMKFKV
VSETTGEPLGFGMSVVRQLAHIVDAIICYIGFLFPLWDAKRQTLADKIMTTVCLPL*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_4389pra-100% (267)proline-rich antigen, Pra
M. marinum MMMAR_2166-2e-2354.95% (111) proline and glycine rich transmembrane protein
M. marinum MMMAR_4208-9e-2049.15% (118) proline and glycine rich transmembrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1107pra1e-11773.78% (267) proline-rich antigen
M. gilvum PYR-GCKMflv_2045-2e-3343.21% (162) RDD domain-containing protein
M. tuberculosis H37RvRv1078pra1e-11673.41% (267) proline-rich antigen
M. leprae Br4923MLBr_02395Ag361e-10065.19% (270) proline rich antigenic protein
M. abscessus ATCC 19977MAB_1196-1e-4550.27% (185) proline-rich antigen
M. avium 104MAV_1202-1e-9763.30% (267) Pra protein
M. smegmatis MC2 155MSMEG_5266-4e-5352.43% (206) RDD family protein
M. thermoresistible (build 8)TH_3105-6e-1241.07% (112) PUTATIVE -
M. ulcerans Agy99MUL_0202pra1e-14590.64% (267) proline-rich antigen Pra-like protein
M. vanbaalenii PYR-1Mvan_4672-4e-3946.51% (172) RDD domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_4389|M.marinum_M               MTDQPPPGGSYP-PPPPPPGSSGGSEPPAGGYQA----PPPPSAPSGGGY
MUL_0202|M.ulcerans_Agy99           MTDQPPPGGSYP-PPPPPPGSSGGSEPPAGGYQA----PPPPSAPSGGGY
Mb1107|M.bovis_AF2122/97            MTEQPPPGGSYP-PPPPPPGPSGGHE------------PPPAAPPGGSGY
Rv1078|M.tuberculosis_H37Rv         MTEQPPPGGSYP-PPPPPPGPSGGHE------------PPPAAPPGGSGY
MAV_1202|M.avium_104                MTDQPPPGGAYP-PPPSSPGSPGGQP------------TPPP-----GGQ
MLBr_02395|M.leprae_Br4923          MTDQPPPSGSNPTPAPPPPGSSGGYEPSFAPSELGSAYPPPTAPPVGGSY
Mflv_2045|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_4672|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_5266|M.smegmatis_MC2_155      -MTQLPPQGPGPAPYGPHPGGHPGPQ------------------------
MAB_1196|M.abscessus_ATCC_1997      MTEVPPP-------------------------------------------
TH_3105|M.thermoresistible__bu      MTNPGNADGTPPAEGQPGPSETGADDLAR--------EPTGGADPTASEH
                                                                                      

MMAR_4389|M.marinum_M               PPPPPPPSPSTSGYPPPPPPPSAPGGSAYPPPPPPPPLEGGYPPPPPPSA
MUL_0202|M.ulcerans_Agy99           PPPPPPPPPSTSGYPPPPPPP---------------PLEGGYPPPPPPSA
Mb1107|M.bovis_AF2122/97            APPPPP--SSGSGYPPPPPPP-----------------GGGAYPPPPPSA
Rv1078|M.tuberculosis_H37Rv         APPPPP--SSGSGYPPPPPPP-----------------GGGAYPPPPPSA
MAV_1202|M.avium_104                QPPPPP----GGSYPPP-PPP------------------GGSYPPPPPPS
MLBr_02395|M.leprae_Br4923          PPPPPP----GGSYPPPPPP-------------------GGSYPPPPPST
Mflv_2045|M.gilvum_PYR-GCK          ------------------------------------------------MR
Mvan_4672|M.vanbaalenii_PYR-1       ------------------------------------------------MT
MSMEG_5266|M.smegmatis_MC2_155      -----------GGYPPPWQPN----------------------PYQTPVP
MAB_1196|M.abscessus_ATCC_1997      ---------------------------------------------PPQGP
TH_3105|M.thermoresistible__bu      TPDQPTAADQAADQAGDRPDE-------------------QAFDGSWAAA
                                                                                      

MMAR_4389|M.marinum_M               GGYAPPPPGPAIRALPAESYTPWITRVLAALIDFAPYVVVTGIG-WLIMM
MUL_0202|M.ulcerans_Agy99           GGYAPPPPGPAIRALPAESYTPWITRVLAALIDFAPYVVVTGIG-WLIMM
Mb1107|M.bovis_AF2122/97            GGYAPPPPGPAIRTMPTESYTPWITRVLAAFIDWAPYVVLVGIG-WVIML
Rv1078|M.tuberculosis_H37Rv         GGYAPPPPGPAIRTMPTESYTPWITRVLAAFIDWAPYVVLVGIG-WVIML
MAV_1202|M.avium_104                GGYAPPPPGPAIRTLPTQDYAPWLTRALAFVIDILPYVVVHGIG-TAILV
MLBr_02395|M.leprae_Br4923          GAYAPPPPGPAIRSLPKEAYTFWVTRVLAYVIDNIPATVLLGIG-MLIQT
Mflv_2045|M.gilvum_PYR-GCK          -------------TAARNPHTSWTRRVAAGILDAVPVMLGWGIW-ESVAI
Mvan_4672|M.vanbaalenii_PYR-1       GNLSGQPP-----AMPRRVYTSWSARVAAFFVDMVPLGLAWGIW-EVVAL
MSMEG_5266|M.smegmatis_MC2_155      GPYGPPT------VPNPQAYTPWFDRVIAFVIDQLPIAVVTVIG-YLVVF
MAB_1196|M.abscessus_ATCC_1997      GGYPPPPPAAGAPALPGGNFEIWIRRVGAYIIDVIPVALLSGIG-GGIAG
TH_3105|M.thermoresistible__bu      GETAPAYGESPPAGFAPLDYPGAGAGTEPYQPSGYPAPPPGAQYPPPYPP
                                                       .      . .   .  *              

MMAR_4389|M.marinum_M               VTTTSS-CVTD-----ISQYDIGQYCVSQPSMIGQLAQWLLSLVG-----
MUL_0202|M.ulcerans_Agy99           VTTTPS-CVTD-----ISQYDIGQYCVSQPSMIGQLAQWLLSLVG-----
Mb1107|M.bovis_AF2122/97            VTQTSS-CVTS-----ISEYDVGQFCVSQPSMIGQLVQWLLSVGG-----
Rv1078|M.tuberculosis_H37Rv         VTQTSS-CVTS-----ISEYDVGQFCVSQPSMIGQLVQWLLSVGG-----
MAV_1202|M.avium_104                ATQQTA-CITD-----VTQYAVNQYCATQNSTLGLVAQWLASIVG-----
MLBr_02395|M.leprae_Br4923          LTKQEA-CVTD-----ITQYNVNQYCATQPTGIGMLAFWFAWLMA-----
Mflv_2045|M.gilvum_PYR-GCK          GAASTE-CVT--------YDNGGVACTAIGSPAGDVVGVLMVFLS-----
Mvan_4672|M.vanbaalenii_PYR-1       RSATLD-CVT--------FDNGGVSCSSGISSVGYLAFALTVAVS-----
MSMEG_5266|M.smegmatis_MC2_155      GILAGA-SQG----------SSDGEITTGVGIVAAVLIFVLSLAP-----
MAB_1196|M.abscessus_ATCC_1997      GTATTADCVGDSFGDPMTGGMSYVSCQPEYTGVGWAAYILFSLAA-----
TH_3105|M.thermoresistible__bu      GPQQPGYGYPAPPPYDAPRYPTPPYDPAQPPQFGAGQFGAAGYPDPNQPG
                                                               .     .                

MMAR_4389|M.marinum_M               -LAYLVWDYGYRQGTTGSSIGKSIMKFKVVSETTGEPLGFG--MSVVRQL
MUL_0202|M.ulcerans_Agy99           -LAYLVWDYGYRQGTTGSSIGKSIMKFKVVSETTGEPLGFG--MSVVRQL
Mb1107|M.bovis_AF2122/97            -LAYLVWNYGYRQGTTGSSIGKSVLKFKVVSETTGQPIGFG--MSVVRQL
Rv1078|M.tuberculosis_H37Rv         -LAYLVWNYGYRQGTIGSSIGKSVLKFKVVSETTGQPIGFG--MSVVRQL
MAV_1202|M.avium_104                -LFYLIWNYGYRQGTTGSSVGKSVMKFKVVSEVTGQPVGFG--MSVVRAL
MLBr_02395|M.leprae_Br4923          -TAYLVWNYGYRQGATGSSIGKTVMKFKVISEATGQPIGFG--MSVVRQL
Mflv_2045|M.gilvum_PYR-GCK          -VAYLCWNFGLRQGRRGASIGKSVMGFRMVDEKTWQAVGFG--RSMLRLL
Mvan_4672|M.vanbaalenii_PYR-1       -VAYLVWNYGHRQGVSGSSVGKSVLRFQVLDEKTWRPVGFG--ASVLRQA
MSMEG_5266|M.smegmatis_MC2_155      -IAYGVWNMGYRQGTTGQSIGKSVMKFKVVSEQTGQPIGFL--MSLVRQV
MAB_1196|M.abscessus_ATCC_1997      -LAFAVWNWGLKQGTTGSSIGKGLLGIRVLGEATGQPIGFG--MSVVRQI
TH_3105|M.thermoresistible__bu      YPGYYGYPQGYSQGYTQPPSTNTLSIWSLVISLISIPLLCSGLLSFLAPP
                                       :  :  *  **    .  : :    :: .    .:      *.:   

MMAR_4389|M.marinum_M               AHIVDAIICYIGF--LFPLWDAKRQTLADKIMTTVCLPL-----------
MUL_0202|M.ulcerans_Agy99           AHIVDAVICYIGF--LFPLWDAKRQTLADKIMTTVCLPL-----------
Mb1107|M.bovis_AF2122/97            AHFIDAIICFVGF--LFPLWDAKRQTLADKIMTTVCVPI-----------
Rv1078|M.tuberculosis_H37Rv         AHFIDAIICFVGF--LFPLWDAKRQTLADKIMTTVCVPI-----------
MAV_1202|M.avium_104                AHFVDAIICFIGF--LFPLWDSKRQTLADKIMTTVCLPLDGSESPPS---
MLBr_02395|M.leprae_Br4923          AHFVDAVICCIGF--LFPLWDSKRQTLADKIMTTVCLPI-----------
Mflv_2045|M.gilvum_PYR-GCK          VHVVDAVPLGIGF--LFPLWDRRRQTLADKLMGTVCVPVQGTVLGTRR--
Mvan_4672|M.vanbaalenii_PYR-1       VHLLDAAVCFIGF--LCPLWDRRRQTLADKLTGTVCVPKRY---------
MSMEG_5266|M.smegmatis_MC2_155      AHIVDGLICYVGY--LFPLWDAKRQTLADKIMTTVCVPVDRQPPQLSYPP
MAB_1196|M.abscessus_ATCC_1997      AHFLDAVICYIGF--LLPLFTAKRQTIADMLVKTVVVPK-----------
TH_3105|M.thermoresistible__bu      AAIAGIVLGSLGLNQIKNTGENGRALAIGGIVAGAAVLVMVVVIILMIML
                                    . . .     :*   :       *    . :   . :             

MMAR_4389|M.marinum_M               -------------------------------
MUL_0202|M.ulcerans_Agy99           -------------------------------
Mb1107|M.bovis_AF2122/97            -------------------------------
Rv1078|M.tuberculosis_H37Rv         -------------------------------
MAV_1202|M.avium_104                -------------------------------
MLBr_02395|M.leprae_Br4923          -------------------------------
Mflv_2045|M.gilvum_PYR-GCK          -------------------------------
Mvan_4672|M.vanbaalenii_PYR-1       -------------------------------
MSMEG_5266|M.smegmatis_MC2_155      QQQFQQAYAPQYQQPYPPYPPQNPPGFNEMR
MAB_1196|M.abscessus_ATCC_1997      -------------------------------
TH_3105|M.thermoresistible__bu      AAAAGA-------------------------