For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKTVVRVALSSIVGLVAFGLIVFIPAGTFDYWQAWVFMAVFAVATLVPSIYLGRTNPAALQRRMHAGPRA ESRGIQKVIITAAFVALFAMVALSALDHRFGWSSVPTAVCLIGDLLIATGLGIAMLVVIQNGYAAATITV ESDQKVVSTGLYSLVRHPMYVGNVILMLGIPLALGSYWGLVIVPPSVLVLAFRILDEESALVDQLDGYRD YMQQVRYRLLPRVW
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4222 | - | - | 100% (224) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1248c | - | 1e-81 | 63.18% (220) | integral membrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1216c | - | 1e-81 | 63.18% (220) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4689c | - | 1e-77 | 58.48% (224) | hypothetical protein MAB_4689c |
M. avium 104 | MAV_1360 | - | 3e-85 | 66.52% (224) | isoprenylcysteine carboxyl methyltransferase (icmt) family |
M. smegmatis MC2 155 | MSMEG_5077 | - | 6e-67 | 52.23% (224) | integral membrane protein |
M. thermoresistible (build 8) | TH_0548 | - | 1e-61 | 50.91% (220) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_4523 | - | 1e-122 | 99.11% (224) | integral membrane protein |
M. vanbaalenii PYR-1 | Mvan_4501 | - | 2e-70 | 58.48% (224) | isoprenylcysteine carboxyl methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5077|M.smegmatis_MC2_155 MKLL------LQAVASGVFGLAFFAVALFWPAGTFDYWQAWVFIAVFLAG Mvan_4501|M.vanbaalenii_PYR-1 MKLV------AQTLASSVLGAAYFVAVLFWPAGTFDYWQAWVFLAVFIVT MMAR_4222|M.marinum_M MKTV------VRVALSSIVGLVAFGLIVFIPAGTFDYWQAWVFMAVFAVA MUL_4523|M.ulcerans_Agy99 MKTV------VRVALSSIVGLVAFGLIVFIPAGTFDYWQARVFMAVFAVA MAV_1360|M.avium_104 MKTG------LRVTATSVWGILSWILILLLPAGTLHYWQAWVFIAVFTVA Mb1248c|M.bovis_AF2122/97 MHIG------LKIFIWGVLGLVVFGALLFGPAGTFDYWQAWVFLAAFVST Rv1216c|M.tuberculosis_H37Rv MHIG------LKIFIWGVLGLVVFGALLFGPAGTFDYWQAWVFLAAFVST MAB_4689c|M.abscessus_ATCC_199 MKTGGLVKAIAKVVAFGVVELAVFGLVLFLLAGTVDYWQVWTFLVVFALS TH_0548|M.thermoresistible__bu VY--------LRTTIYSVFGMVLFGALMFGPAGTLGYWQGWALLAVLVAF : : .: : :: ***. *** .::..: MSMEG_5077|M.smegmatis_MC2_155 TLIPSFYLAVTDPVTLQRRLHAGPTAETRSAQKVAAVALVVAVLAVLIVS Mvan_4501|M.vanbaalenii_PYR-1 TLGPTFFLAVRHPDALARRMKAGPTAETRPAQRLIITLTVVLVTATFVLS MMAR_4222|M.marinum_M TLVPSIYLGRTNPAALQRRMHAGPRAESRGIQKVIITAAFVALFAMVALS MUL_4523|M.ulcerans_Agy99 TLVPSIYLGRTNPAALQRRMHAGPRAESRGIQKVIITAAFVALFAMVALS MAV_1360|M.avium_104 TIVPAAYLARTNPAALQRRMRAGPRAEPRTAQKFIITGSFLSLFAAMVFS Mb1248c|M.bovis_AF2122/97 TIGPTIYLARNDPAALQRRMRSGPLAEGRTIQKFIVIGAFLGFFAMMVLS Rv1216c|M.tuberculosis_H37Rv TIGPTIYLARNDPAALQRRMRSGPLAEGRTIQKFIVIGAFLGFFAMMVLS MAB_4689c|M.abscessus_ATCC_199 TWIPTVYLQRADPAAHQRRKRAGPVAETRSLQKVLIGSWYFSLAAMVVIS TH_0548|M.thermoresistible__bu TVPYTVYLAVKMPDTLRRRLRSGPTAESRPAQRAAILVVQLAALGMLVLG * : :* * : ** ::** ** * *: . . . .. MSMEG_5077|M.smegmatis_MC2_155 ALDRRFGWSSVPAWLALAADVVVVVSLVLSQVVIFQNRFAAATIRVEAEQ Mvan_4501|M.vanbaalenii_PYR-1 ALDHRFGWSSAPAWVVVVGNTLVALGLSGAQLVVVQNHYAAATVRVEAGQ MMAR_4222|M.marinum_M ALDHRFGWSSVPTAVCLIGDLLIATGLGIAMLVVIQNGYAAATITVESDQ MUL_4523|M.ulcerans_Agy99 ALDHRFGWSSVPTAVCLIGDLLIATGLGIAMLVVIQNGYAAATITVECDQ MAV_1360|M.avium_104 ALDHRFGWSSVPAWLSLLGDVLVATGLGIAMLVVIQNSYAAATVTVEAGQ Mb1248c|M.bovis_AF2122/97 ACDHRYGWSSVPAAVCVIGDVLVMTGLGIAMLVVIQNRYAASTVRVEAGQ Rv1216c|M.tuberculosis_H37Rv ACDHRYGWSSVPAAVCVIGDVLVMTGLGIAMLVVIQNRYAASTVRVEAGQ MAB_4689c|M.abscessus_ATCC_199 ALDHRFGWSSVPPAICAAGDVLVAVGLGVTSLVVVQNGFAASTVRVETGQ TH_0548|M.thermoresistible__bu GLDHRLGWSRAPVWVCVVGLVLTAAGLAITMGSVLQNAWAAATVTTESDQ . *:* *** .* : . : .* : :.** :**:*: .* * MSMEG_5077|M.smegmatis_MC2_155 QVISTGMYGWVRHPMYSWALVMILASPLALGSFWALLAATAGLPVLVFRI Mvan_4501|M.vanbaalenii_PYR-1 PLVSTGLYGLVRHPMYTGTVVMMLGTPLALGSLWGLLGVAASAPVLVARI MMAR_4222|M.marinum_M KVVSTGLYSLVRHPMYVGNVILMLGIPLALGSYWGLVIVPPSVLVLAFRI MUL_4523|M.ulcerans_Agy99 KVVSTGLYSLVRHPMYVGNVILMLGIPLALGSYWGLVIVPPSVLVLAFRI MAV_1360|M.avium_104 TVVSSGLYRFVRHPMYTGNVIMMIGIPLALGSYWGLLFVVPGTALLALRI Mb1248c|M.bovis_AF2122/97 ILASDGLYKIVRHPMYAGNVVMMTGIPLALGSYWAMFILVPGTLVLVFRI Rv1216c|M.tuberculosis_H37Rv ILASDGLYKIVRHPMYAGNVVMMTGIPLALGSYWAMFILVPGTLVLVFRI MAB_4689c|M.abscessus_ATCC_199 TLVTTGLYGLVRHPMYTGNFITIVGFPLALGSYWGLACVVPSLLVLIVRI TH_0548|M.thermoresistible__bu QVVSTGLYGVVRHPLYAGSVVLFLGMPLALGSYWALALVVVAVAGLVVRI : : *:* ****:* .: : . ****** *.: . * ** MSMEG_5077|M.smegmatis_MC2_155 LDEEKMLVAELRGYDEYRQKIRYRLVPGVW Mvan_4501|M.vanbaalenii_PYR-1 LDEEKMLTAELAGYREYRRQVRYRLVPGVW MMAR_4222|M.marinum_M LDEESALVDQLDGYRDYMQQVRYRLLPRVW MUL_4523|M.ulcerans_Agy99 LDEESALVDQLDGYRDYMQQVRYRLLPRVW MAV_1360|M.avium_104 FDEEKLLLQELPGYPDYTQKVRYRLAPHLW Mb1248c|M.bovis_AF2122/97 LDEEKLLTQELSGYREYRQLVRYRLVPYVW Rv1216c|M.tuberculosis_H37Rv LDEEKLLTQELSGYREYRQLVRYRLVPYVW MAB_4689c|M.abscessus_ATCC_199 VDEEKLLVEELDGYRAYTRAARYRLMPYVW TH_0548|M.thermoresistible__bu LDEEALLRTELAGYPDYTRAVPYRLVPYVW .*** * :* ** * : *** * :*