For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KTGLRVTATSVWGILSWILILLLPAGTLHYWQAWVFIAVFTVATIVPAAYLARTNPAALQRRMRAGPRAE PRTAQKFIITGSFLSLFAAMVFSALDHRFGWSSVPAWLSLLGDVLVATGLGIAMLVVIQNSYAAATVTVE AGQTVVSSGLYRFVRHPMYTGNVIMMIGIPLALGSYWGLLFVVPGTALLALRIFDEEKLLLQELPGYPDY TQKVRYRLAPHLW*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1360 | - | - | 100% (224) | isoprenylcysteine carboxyl methyltransferase (icmt) family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1248c | - | 4e-81 | 64.29% (224) | integral membrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv1216c | - | 4e-81 | 64.29% (224) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1357c | - | 1e-73 | 57.14% (224) | hypothetical protein MAB_1357c |
M. marinum M | MMAR_4222 | - | 4e-85 | 66.52% (224) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_5077 | - | 7e-66 | 51.34% (224) | integral membrane protein |
M. thermoresistible (build 8) | TH_0548 | - | 6e-60 | 50.91% (220) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_4523 | - | 1e-83 | 66.07% (224) | integral membrane protein |
M. vanbaalenii PYR-1 | Mvan_4501 | - | 1e-69 | 57.59% (224) | isoprenylcysteine carboxyl methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4222|M.marinum_M MKTVVRVALSSIVGLVAFGLIVFIPAGTFDYWQAWVFMAVFAVATLVPSI MUL_4523|M.ulcerans_Agy99 MKTVVRVALSSIVGLVAFGLIVFIPAGTFDYWQARVFMAVFAVATLVPSI MAV_1360|M.avium_104 MKTGLRVTATSVWGILSWILILLLPAGTLHYWQAWVFIAVFTVATIVPAA Mb1248c|M.bovis_AF2122/97 MHIGLKIFIWGVLGLVVFGALLFGPAGTFDYWQAWVFLAAFVSTTIGPTI Rv1216c|M.tuberculosis_H37Rv MHIGLKIFIWGVLGLVVFGALLFGPAGTFDYWQAWVFLAAFVSTTIGPTI MSMEG_5077|M.smegmatis_MC2_155 MKLLLQAVASGVFGLAFFAVALFWPAGTFDYWQAWVFIAVFLAGTLIPSF Mvan_4501|M.vanbaalenii_PYR-1 MKLVAQTLASSVLGAAYFVAVLFWPAGTFDYWQAWVFLAVFIVTTLGPTF MAB_1357c|M.abscessus_ATCC_199 MKTGAQALISGLTGLAVFGAALFWPAGTFHYWQAWVFLAIFVVCSGVSSI TH_0548|M.thermoresistible__bu --VYLRTTIYSVFGMVLFGALMFGPAGTLGYWQGWALLAVLVAFTVPYTV : .: * : :: ****: ***. .::* : : : MMAR_4222|M.marinum_M YLGRTNPAALQRRMHAGPRAESRGIQKVIITAAFVALFAMVALSALDHRF MUL_4523|M.ulcerans_Agy99 YLGRTNPAALQRRMHAGPRAESRGIQKVIITAAFVALFAMVALSALDHRF MAV_1360|M.avium_104 YLARTNPAALQRRMRAGPRAEPRTAQKFIITGSFLSLFAAMVFSALDHRF Mb1248c|M.bovis_AF2122/97 YLARNDPAALQRRMRSGPLAEGRTIQKFIVIGAFLGFFAMMVLSACDHRY Rv1216c|M.tuberculosis_H37Rv YLARNDPAALQRRMRSGPLAEGRTIQKFIVIGAFLGFFAMMVLSACDHRY MSMEG_5077|M.smegmatis_MC2_155 YLAVTDPVTLQRRLHAGPTAETRSAQKVAAVALVVAVLAVLIVSALDRRF Mvan_4501|M.vanbaalenii_PYR-1 FLAVRHPDALARRMKAGPTAETRPAQRLIITLTVVLVTATFVLSALDHRF MAB_1357c|M.abscessus_ATCC_199 YLARSNPAVLQRRLHGGPMAETRPVQKFAVTLLLSSFVALVVVSAFDHRF TH_0548|M.thermoresistible__bu YLAVKMPDTLRRRLRSGPTAESRPAQRAAILVVQLAALGMLVLGGLDHRL :*. * .* **::.** ** * *: . . ... *:* MMAR_4222|M.marinum_M GWSSVPTAVCLIGDLLIATGLGIAMLVVIQNGYAAATITVESDQKVVSTG MUL_4523|M.ulcerans_Agy99 GWSSVPTAVCLIGDLLIATGLGIAMLVVIQNGYAAATITVECDQKVVSTG MAV_1360|M.avium_104 GWSSVPAWLSLLGDVLVATGLGIAMLVVIQNSYAAATVTVEAGQTVVSSG Mb1248c|M.bovis_AF2122/97 GWSSVPAAVCVIGDVLVMTGLGIAMLVVIQNRYAASTVRVEAGQILASDG Rv1216c|M.tuberculosis_H37Rv GWSSVPAAVCVIGDVLVMTGLGIAMLVVIQNRYAASTVRVEAGQILASDG MSMEG_5077|M.smegmatis_MC2_155 GWSSVPAWLALAADVVVVVSLVLSQVVIFQNRFAAATIRVEAEQQVISTG Mvan_4501|M.vanbaalenii_PYR-1 GWSSAPAWVVVVGNTLVALGLSGAQLVVVQNHYAAATVRVEAGQPLVSTG MAB_1357c|M.abscessus_ATCC_199 GWSQAPTWLVIVGEVLTIGGLGMATLVVAQNNYAAASITVESGQTVTATG TH_0548|M.thermoresistible__bu GWSRAPVWVCVVGLVLTAAGLAITMGSVLQNAWAAATVTTESDQQVVSTG *** .*. : : . : .* : : ** :**::: .*. * : : * MMAR_4222|M.marinum_M LYSLVRHPMYVGNVILMLGIPLALGSYWGLVIVPPSVLVLAFRILDEESA MUL_4523|M.ulcerans_Agy99 LYSLVRHPMYVGNVILMLGIPLALGSYWGLVIVPPSVLVLAFRILDEESA MAV_1360|M.avium_104 LYRFVRHPMYTGNVIMMIGIPLALGSYWGLLFVVPGTALLALRIFDEEKL Mb1248c|M.bovis_AF2122/97 LYKIVRHPMYAGNVVMMTGIPLALGSYWAMFILVPGTLVLVFRILDEEKL Rv1216c|M.tuberculosis_H37Rv LYKIVRHPMYAGNVVMMTGIPLALGSYWAMFILVPGTLVLVFRILDEEKL MSMEG_5077|M.smegmatis_MC2_155 MYGWVRHPMYSWALVMILASPLALGSFWALLAATAGLPVLVFRILDEEKM Mvan_4501|M.vanbaalenii_PYR-1 LYGLVRHPMYTGTVVMMLGTPLALGSLWGLLGVAASAPVLVARILDEEKM MAB_1357c|M.abscessus_ATCC_199 LYGLVRHPMYTGSLVMMVGMPLALGSYWGLLATVPAAAALVVRIIDEEKM TH_0548|M.thermoresistible__bu LYGVVRHPLYAGSVVLFLGMPLALGSYWALALVVVAVAGLVVRILDEEAL :* ****:* :::: . ****** *.: . *. **:*** MMAR_4222|M.marinum_M LVDQLDGYRDYMQQVRYRLLPRVW MUL_4523|M.ulcerans_Agy99 LVDQLDGYRDYMQQVRYRLLPRVW MAV_1360|M.avium_104 LLQELPGYPDYTQKVRYRLAPHLW Mb1248c|M.bovis_AF2122/97 LTQELSGYREYRQLVRYRLVPYVW Rv1216c|M.tuberculosis_H37Rv LTQELSGYREYRQLVRYRLVPYVW MSMEG_5077|M.smegmatis_MC2_155 LVAELRGYDEYRQKIRYRLVPGVW Mvan_4501|M.vanbaalenii_PYR-1 LTAELAGYREYRRQVRYRLVPGVW MAB_1357c|M.abscessus_ATCC_199 LRHDLQGYDEYTEKVRSRLVPLVW TH_0548|M.thermoresistible__bu LRTELAGYPDYTRAVPYRLVPYVW * :* ** :* . : ** * :*