For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSDSTTLEEQPEPAEVVEPEGESGQAGVPEAQPRDEDQDETADETQDETQEDADADPEAGEDDAQASDGE QESPKPAPSKVRLAIVVGLAAVVAMAALASWFGFHAYQSHQADQQRKLYVQVARQGAINLTTIDWEHVDA DIERILNSATGTFYDDFQRRSKPFIQVVQHFQSKSVGTITAAALESESDDAAQVLVAVSVKTTTAGAPEQ RPRAWRMRITVQQVGDEAKVANVEFVP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_4057 | - | - | 100% (237) | Mce associated membrane protein |
| M. marinum M | MMAR_2888 | - | 9e-45 | 51.45% (173) | Mce associated membrane protein |
| M. marinum M | MMAR_3994 | - | 6e-31 | 33.48% (221) | hypothetical protein MMAR_3994 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1398c | - | 5e-29 | 31.38% (239) | hypothetical protein Mb1398c |
| M. gilvum PYR-GCK | Mflv_2107 | - | 1e-65 | 55.75% (226) | hypothetical protein Mflv_2107 |
| M. tuberculosis H37Rv | Rv1972 | - | 1e-47 | 48.92% (186) | mce associated membrane protein |
| M. leprae Br4923 | MLBr_02614 | - | 1e-08 | 24.89% (221) | hypothetical protein MLBr_02614 |
| M. abscessus ATCC 19977 | MAB_1004c | - | 3e-17 | 28.85% (208) | hypothetical protein MAB_1004c |
| M. avium 104 | MAV_2538 | - | 7e-62 | 61.78% (191) | hypothetical protein MAV_2538 |
| M. smegmatis MC2 155 | MSMEG_5208 | - | 1e-49 | 48.42% (190) | hypothetical protein MSMEG_5208 |
| M. thermoresistible (build 8) | TH_0481 | - | 3e-47 | 48.00% (200) | PROBABLE CONSERVED MCE ASSOCIATED MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_3924 | - | 1e-127 | 97.47% (237) | Mce associated membrane protein |
| M. vanbaalenii PYR-1 | Mvan_4598 | - | 2e-63 | 50.22% (231) | hypothetical protein Mvan_4598 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4057|M.marinum_M ------------MSDS-------TTLEEQPEPAEVVEPEGESGQAGVPEA
MUL_3924|M.ulcerans_Agy99 ------------MSDS-------TTLEEQPEPAEVVEPEGESGQAGVPEA
MAV_2538|M.avium_104 -------------------------------------------------M
Rv1972|M.tuberculosis_H37Rv ------------------------------------------------MS
Mflv_2107|M.gilvum_PYR-GCK ------------MADD----------AAAPEGE-------LTDAQEREAS
Mvan_4598|M.vanbaalenii_PYR-1 ------------MADEKRPAEESTTEVDAPAGSPDATPAPVADPAEMESD
TH_0481|M.thermoresistible__bu ---------------------------------------MVDGNVAGAED
MSMEG_5208|M.smegmatis_MC2_155 --------------------------------------------------
Mb1398c|M.bovis_AF2122/97 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREA
MAB_1004c|M.abscessus_ATCC_199 ----------------------MVTMTKEDVDSTNDADTDTADDKETVDS
MLBr_02614|M.leprae_Br4923 -----------------------------------------MNWPKTPGT
MMAR_4057|M.marinum_M QPRDEDQDETADETQDETQEDADADPEAGEDDAQASDGEQESP-KPAPSK
MUL_3924|M.ulcerans_Agy99 QPRDEDQDETADET----QEDADADPEAGEDDAQASDGEQESP-KPAPSK
MAV_2538|M.avium_104 EARDDE------------VEDYDAS----VDDAAEPDAEDPAPAKKLRSP
Rv1972|M.tuberculosis_H37Rv VAVDSD------------AEDDAVS------EIAEAAGVSPAPAKPSMSA
Mflv_2107|M.gilvum_PYR-GCK TAAEP---TDTDIDTEDTEDADAPEAVEDDSVDADVDETDATPATGAMSH
Mvan_4598|M.vanbaalenii_PYR-1 TAEDSEVIEEYDLEAEDSEADEAEASEADEAEASEADEAEAAPRS-PMSH
TH_0481|M.thermoresistible__bu VAEAED-----------VAEAEDVAEAEDVAGAEDVAGSASPSDDRRSFP
MSMEG_5208|M.smegmatis_MC2_155 MADDD---------------SPDAVESTDAEEAEEAAEDGTPDVKEPLSR
Mb1398c|M.bovis_AF2122/97 LAMAPAEDENVPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVR
MAB_1004c|M.abscessus_ATCC_199 AAETDS------EIAEDAASTDTDAASSADSDSETASSDEDGDAAKGASW
MLBr_02614|M.leprae_Br4923 LAAMPD---------------EEQTELPVHKEFAGIADYSDPGLSDGSVF
.
MMAR_4057|M.marinum_M VRLAIVVGLAAVVAMAA-LASWFGFHAYQSHQADQQRK---LYVQVARQG
MUL_3924|M.ulcerans_Agy99 VRLAIVVGLAAVVAMAA-LASWFGFHAYQSHQADQQRK---LYVQVARQG
MAV_2538|M.avium_104 ALLATVFGLVTVVGLAA-LGGWFGYQTYQSHQAQQQRE---LMVRIGRQG
Rv1972|M.tuberculosis_H37Rv PRRMLLFGLVVVVALAV-LLCCWGFRVQRARHAQDQRG---HFLQAARQC
Mflv_2107|M.gilvum_PYR-GCK IKLALIAGLVGVLALAG-LAGWLGYQTYESHQAEEQRN---LFVQVGRQG
Mvan_4598|M.vanbaalenii_PYR-1 VKVALIAGLVGVLALAG-LTAWMGYRTYEANRDEHRRE---LFLQVGRQG
TH_0481|M.thermoresistible__bu AGWVLLAGGLGVLALCLTLVGWLGYRAYDSRVDEAQRQ---LFLQVGRQA
MSMEG_5208|M.smegmatis_MC2_155 VALGARVGIAVVVVLAV-LTGWLGYRAYQSYGVEQQRE---AFLQAGRQA
Mb1398c|M.bovis_AF2122/97 LPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQG
MAB_1004c|M.abscessus_ATCC_199 VRYAALGAVAAIMVGALVFSGIFGWKVWQQHQIDAAGE---QALAVAIPY
MLBr_02614|M.leprae_Br4923 SQYGIASTVLAVLSAAAVVFGVVIWRAHHDNSAERAYLT--HVMQTAFDW
: . : . .
MMAR_4057|M.marinum_M AINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIQVVQHFQSKSV
MUL_3924|M.ulcerans_Agy99 AINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIKVVQHFQSKSV
MAV_2538|M.avium_104 ALNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSKSV
Rv1972|M.tuberculosis_H37Rv ALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTV
Mflv_2107|M.gilvum_PYR-GCK ALNLTTINWESAEADVQRILDSATGTFYDDFQQRAEPFVQVVKQAQSKSE
Mvan_4598|M.vanbaalenii_PYR-1 ALNLTTIDWQNAEADVQRILDSATGTFYDDFQQRAQPFVEVVKQAQSKSV
TH_0481|M.thermoresistible__bu AINLTTIDHTRAEADVQRIIDGSTGGFREDFESRSAPFIEVVRQAESKSE
MSMEG_5208|M.smegmatis_MC2_155 ATALTNVGWETADADVQRVLDSASGTFFDDFQKRAESYLEVVKQVQSKSE
Mb1398c|M.bovis_AF2122/97 VINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTE
MAB_1004c|M.abscessus_ATCC_199 TETLTSIDSNDIDESFRKILNGATGDLKKDFTPASVQLRQLLLDNKAASH
MLBr_02614|M.leprae_Br4923 TGVLINMNTSNVDASLQRLHAGTVGELNTDFDAAVQPYRKVVEKLQTQSR
. : .:. . .. :: .: * : ** .:: . : :
MMAR_4057|M.marinum_M GTITAAALESES---------------------DDAAQVLVAVSVKTTTA
MUL_3924|M.ulcerans_Agy99 GTITAAALESES---------------------DDAAQVLVAVSVKTTTA
MAV_2538|M.avium_104 GTITEAGLESQS---------------------GSEAQVLVAVSVKTSNL
Rv1972|M.tuberculosis_H37Rv GTITEAGLQTQT---------------------ADTAQALVAVSVQTSNA
Mflv_2107|M.gilvum_PYR-GCK GTIAEAGLESAT---------------------DSEGQVLVAVTVRTTNA
Mvan_4598|M.vanbaalenii_PYR-1 GTVAEAGLESAG---------------------ANEAQVLVAVTVKTSNA
TH_0481|M.thermoresistible__bu GTVTEAGLESMD---------------------DDEGQVLVAVSVRTTTP
MSMEG_5208|M.smegmatis_MC2_155 GTITSSALESVD---------------------DNTAKVLVSVTVKSTNA
Mb1398c|M.bovis_AF2122/97 GTVNATAVESMN---------------------EHSAVVLVAATSRVTNS
MAB_1004c|M.abscessus_ATCC_199 GKVVNSAIQYKS---------------------TNKVVLLMMVDQSITNT
MLBr_02614|M.leprae_Br4923 GQIEAVAIESVHHDLDTQPGVAHPVVTTKLLPPAARTDSVMLVATSVSEN
* : .:: :: . :
MMAR_4057|M.marinum_M GAPEQRPRAWRMRITVQQVGDEAKVANVEFVP
MUL_3924|M.ulcerans_Agy99 AAPEQRPRAWRMRITVQQVGDEAKVANVEFVP
MAV_2538|M.avium_104 GAAEQDPRHWRMRVIVQKVGNDMKVSNVAFVP
Rv1972|M.tuberculosis_H37Rv GEADPVPRAWRMRITVQRVGDRVKVSDVGFVP
Mflv_2107|M.gilvum_PYR-GCK GTPEQQPRAWRMRISVQEIDGDAKVSNVEFVP
Mvan_4598|M.vanbaalenii_PYR-1 GAPEQEPRAWRMRISVEKIGDDAKVSNVEFVP
TH_0481|M.thermoresistible__bu ADPEPQPRSWRMRITVQKDHDEAKVSNVEFVP
MSMEG_5208|M.smegmatis_MC2_155 GVPEQAPQFWRMRLTVEENAGQAKVSDVEFIE
Mb1398c|M.bovis_AF2122/97 AGAKDEPRAWRLKVTVTEEGGQYKMSKVEFVP
MAB_1004c|M.abscessus_ATCC_199 QRPDPRVDKSRMKITMEKIDGRWLASKLEYL-
MLBr_02614|M.leprae_Br4923 VGGKPTTVHWSLRLDVSDVDGKLMISHLESIR
. ::: : . :.: :