For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAETNEPSSELPTTKANAMALAAEAEAEAAEAEALAAAARARARAAQLKREALALAEDEEYDEYEDDEYE DDEEYEDYDDYVAEDEDAESTEAEDEEPNKPLSWRDRAVKWARIARLSIVVKVAALLIVFGFAGLSAYFV WNHSQVTQRQERAEAFTDGAKTGVVNMTSLDFNKAKEDVQRVIDSSTGEFKEEFQSRAADFTKVVEQSKV VTEGTVHAAAVESMEGHTAVVLISATSHVTNGGDGKQEPRIWRLRVTVTEEDGQYKMSKVEFVP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3994 | - | - | 100% (274) | hypothetical protein MMAR_3994 |
M. marinum M | MMAR_4687 | - | 8e-48 | 40.27% (298) | hypothetical protein MMAR_4687 |
M. marinum M | MMAR_4702 | - | 1e-33 | 35.56% (270) | hypothetical protein MMAR_4702 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1398c | - | 5e-91 | 65.69% (274) | hypothetical protein Mb1398c |
M. gilvum PYR-GCK | Mflv_2526 | - | 2e-55 | 46.99% (266) | hypothetical protein Mflv_2526 |
M. tuberculosis H37Rv | Rv1363c | - | 1e-91 | 66.06% (274) | hypothetical protein Rv1363c |
M. leprae Br4923 | MLBr_02614 | - | 4e-06 | 22.65% (181) | hypothetical protein MLBr_02614 |
M. abscessus ATCC 19977 | MAB_1004c | - | 1e-15 | 24.46% (233) | hypothetical protein MAB_1004c |
M. avium 104 | MAV_0938 | - | 2e-72 | 49.66% (296) | hypothetical protein MAV_0938 |
M. smegmatis MC2 155 | MSMEG_4771 | - | 9e-55 | 45.14% (288) | hypothetical protein MSMEG_4771 |
M. thermoresistible (build 8) | TH_0392 | - | 1e-43 | 50.60% (166) | POSSIBLE MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_3858 | - | 1e-145 | 96.35% (274) | hypothetical protein MUL_3858 |
M. vanbaalenii PYR-1 | Mvan_4132 | - | 8e-56 | 45.77% (284) | hypothetical protein Mvan_4132 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3994|M.marinum_M ---------------MAETNEPSSELPTTK---ANAMALAAEAEAEAAEA MUL_3858|M.ulcerans_Agy99 ---------------MAETNEPSSELPTTK---ANAMALAAEAEAEAAEA Mb1398c|M.bovis_AF2122/97 ---------------MAETTEPPSDAGTSQ---ADAMALA--AEAEAAEA Rv1363c|M.tuberculosis_H37Rv ---------------MAETTEPPSDAGTSQ---ADAMALA--AEAEAAEA MAV_0938|M.avium_104 ---------------MADAKKPPHDSATSD---EDVKALLEEAEAEAAEA MSMEG_4771|M.smegmatis_MC2_155 MPSRKPTLPVINGSHGDDQDADRSDSPAGELSADDALLLAEQAEAEAAEA TH_0392|M.thermoresistible__bu -VHWRPXX---------XAAPDSSDTTP---------------------- Mflv_2526|M.gilvum_PYR-GCK MPSFRRRDSVIEADRVEESTVDPEGVPAG----DRARALADVAEAEAAEA Mvan_4132|M.vanbaalenii_PYR-1 MPSFRRRDAVIDADRVEESTVEPESVTEA----DQARALAEEAEAEAAEA MAB_1004c|M.abscessus_ATCC_199 ---------------MVTMTKEDVDSTN---------------DADTDTA MLBr_02614|M.leprae_Br4923 ----------------MNWPKTPGTLAAMP-----------------DEE MMAR_3994|M.marinum_M EALAAAARARARAAQLKREALALAEDEEYDEYEDDEYEDDEEYEDYDDYV MUL_3858|M.ulcerans_Agy99 EALAAAARARARAAQLKREALALAEDEEYDEYEDD-----EEYEDYDDYV Mb1398c|M.bovis_AF2122/97 EALAAAARARARAARLKREALAMAPAE--DENVPEEYADWEDAEDYDDY- Rv1363c|M.tuberculosis_H37Rv EALAAAARARARAARLKREALAMAPAE--DENVPEEYADWEDAEDYDDY- MAV_0938|M.avium_104 EALAAAARARARAARLRREAQAQAAKAAAETSEADEHAADDEPAETDDEV MSMEG_4771|M.smegmatis_MC2_155 EAIAAAARARAEALRLRRQAEEAAKRS-SEADAENESVDESETGEPEDAE TH_0392|M.thermoresistible__bu ---AAGARRR---FRLR--------------------------------- Mflv_2526|M.gilvum_PYR-GCK EAMAAAARARARAAKLRQEALAAAADSDGETARTDAVASTTEATDDAD-- Mvan_4132|M.vanbaalenii_PYR-1 EAMAAAAKARARAARLRRQALAADVAAKPEVGEDSATVGDADVDGDDDAV MAB_1004c|M.abscessus_ATCC_199 DDKETVDSAAETDSEIAEDAASTDTDAASSADSDSETASSDEDGDAAKG- MLBr_02614|M.leprae_Br4923 QTELPVHKEFAGIADYSDPGLSDGSVFSQYGIASTVLAVLSAAAVVFG-- . MMAR_3994|M.marinum_M AE------DEDAESTEAEDEEPNKPLS----------------WRDRAVK MUL_3858|M.ulcerans_Agy99 AE------DEDAESTEAEDEEPNKPLS----------------WRDRAVK Mb1398c|M.bovis_AF2122/97 ------------DDYEAADQEAARSAS----------------WRRRLR- Rv1363c|M.tuberculosis_H37Rv ------------DDYEAADQEAARSAS----------------WRRRLR- MAV_0938|M.avium_104 SDSVEATDADDTETTQAQTKEAAKEAEPNEEAAEETAEDAESESKARSRR MSMEG_4771|M.smegmatis_MC2_155 NAEDTEDTEAAEDTEAAEKDSAGKPEA----------QEAQELPEAKLTT TH_0392|M.thermoresistible__bu -------------------------------------------------- Mflv_2526|M.gilvum_PYR-GCK ------DAELLDID-DDRDDDLDGDET----------DAVGEAESPTRKR Mvan_4132|M.vanbaalenii_PYR-1 TGSADAEPEVVDIETAETDETAETDDS----------APADGGAAPSRRR MAB_1004c|M.abscessus_ATCC_199 -------------------------------------------------- MLBr_02614|M.leprae_Br4923 -------------------------------------------------- MMAR_3994|M.marinum_M WARIARLSIVVKVAALLIVFG----FAGLSAYFVWNHSQVTQRQERAEAF MUL_3858|M.ulcerans_Agy99 WARIARLSIVVKVAALLIVFG----FAGLSAYFVWNHGQVTQRQERAEAF Mb1398c|M.bovis_AF2122/97 -VRLPRLSTIAMAAAVVIICG----FTGLSGYIVWQHHEATERQQRAAAF Rv1363c|M.tuberculosis_H37Rv -VRLPRLSTIAMAAAVVIICG----FTGLSGYIVWQHHEATERQQRAAAF MAV_0938|M.avium_104 RLRLPSWSVAWKAAVIALICA----FVAASGYMMWERHQTSERNQRIANF MSMEG_4771|M.smegmatis_MC2_155 RTNAPVWKWIAAGVTVVIILG----LLTVSGLMMYHHKQMQDDQRRAAEF TH_0392|M.thermoresistible__bu ------WGIVARAAAIVAICL----LLAASGYMVWYHQQVEAEKQRAAEF Mflv_2526|M.gilvum_PYR-GCK LLRRPGWASVGVALVLVIAVLGTAALLAVSGYMRLEHRDAENLRQQNAEY Mvan_4132|M.vanbaalenii_PYR-1 RIPRPGWK----AAVATVVALATVALLGASGYMVWTHRGAEKLRQQNAEY MAB_1004c|M.abscessus_ATCC_199 ---ASWVRYAALGAVAAIMVG----ALVFSGIFGWKVWQQHQIDAAGEQA MLBr_02614|M.leprae_Br4923 ---VVIWRAHHDNSAERAYLT-----HVMQTAFDWTGVLINMNTSNVDAS . . : MMAR_3994|M.marinum_M TDGAKTGVVNMTSLDFNKAKEDVQRVIDSSTGEFKEEFQSRAADFTKVVE MUL_3858|M.ulcerans_Agy99 TDGAKTGVVNMISLDFNRAKEDVQRVIDSSTGEFKEEFHSRAADFTKVVE Mb1398c|M.bovis_AF2122/97 AAGAKQGVINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE Rv1363c|M.tuberculosis_H37Rv AAGAKQGVINMTSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVE MAV_0938|M.avium_104 LAAARQGVVNMTSLDFNKAKEDVQRVIDSSTGQFRDDFQQRAKDFTTVVE MSMEG_4771|M.smegmatis_MC2_155 AAAARQGVVTLMSLDHTHAKEDVQRIIDMSTGDFRADFEATAEDFAKVAE TH_0392|M.thermoresistible__bu AAAARQGIVSLMSLDFNRAEEDVQRIIDNSTGEFREEFESAAEDFATVAK Mflv_2526|M.gilvum_PYR-GCK AAAARQSVVTLMSLDFNKAEEDVQRIIDNSTGQFKDDFESQAAEFVKVAQ Mvan_4132|M.vanbaalenii_PYR-1 AAAARQSVVTLMSLDFNKAEEDVQRIIDNSTGQFKTDFESQAADFVKVAQ MAB_1004c|M.abscessus_ATCC_199 LAVAIPYTETLTSIDSNDIDESFRKILNGATGDLKKDFTPASVQLRQLLL MLBr_02614|M.leprae_Br4923 LQRLHAGTVGELNTDFDAAVQPYRKVVEKLQTQSRGQIEAVAIESVHHDL . * : :::: : : :: : : MMAR_3994|M.marinum_M QSKVVTEGTVHAAAVESMEGHTAVVLISATSHVTNGGDGKQEPRIWRLRV MUL_3858|M.ulcerans_Agy99 QSKVVTEGTVHAAAVESMEGHTAVVLISATSRVTNGGDGKQEPRIWRLRV Mb1398c|M.bovis_AF2122/97 QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKV Rv1363c|M.tuberculosis_H37Rv QSKVVTEGTVNATAVESMNEHSAVVLVAATSRVTNSAGAKDEPRAWRLKV MAV_0938|M.avium_104 QSKVVTQGTVNAAAVQSIDGNSALVLVAATSRITNAAGAKDEPRNWRLKV MSMEG_4771|M.smegmatis_MC2_155 QAKVTTEAQVNATAVDSMTDDSAVVLVAATSRISNSAGADQDPRNWRLSV TH_0392|M.thermoresistible__bu ESKVITDVSVNATAVQSMTEDSAEVLVAATSSITNEAGANQDPRSWRLFV Mflv_2526|M.gilvum_PYR-GCK DSKVVTEVTVNSTAVERMTGDGAEVLVAASSRVTNTAGADQEPRTWRLSV Mvan_4132|M.vanbaalenii_PYR-1 DSKVVTEVSVNSTAVESMSDDSAEVLVAASSRVTNTAGANQEPRTWRLSV MAB_1004c|M.abscessus_ATCC_199 DNKAASHGKVVNSAIQYKSTNKVVLLMMVDQSITNTQRPDPRVDKSRMKI MLBr_02614|M.leprae_Br4923 DTQPGVAHPVVTTKLLPPAARTDSVMLVATS-VSENVGGKPTTVHWSLRL : : * : : ::: . . ::: . : : MMAR_3994|M.marinum_M TVTEEDGQYKMSKVEFVP MUL_3858|M.ulcerans_Agy99 TVTEEDGQYKMSKVEFVP Mb1398c|M.bovis_AF2122/97 TVTEEGGQYKMSKVEFVP Rv1363c|M.tuberculosis_H37Rv TVTEEGGQYKMSKVEFVP MAV_0938|M.avium_104 TVTDEGGQYKMSKLEFVP MSMEG_4771|M.smegmatis_MC2_155 TVKQDGDQIKLAKVEFVP TH_0392|M.thermoresistible__bu SVTRDDGQLKMSKVEFVP Mflv_2526|M.gilvum_PYR-GCK SLVREDGQIKMSKVEFVP Mvan_4132|M.vanbaalenii_PYR-1 SLKREDGQIKMAKVEFVP MAB_1004c|M.abscessus_ATCC_199 TMEKIDGRWLASKLEYL- MLBr_02614|M.leprae_Br4923 DVSDVDGKLMISHLESIR : ..: :::* :