For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSVMTSPGPPPDQALEHRCADSAAEEHRSAPLRATLFGLAVVVALAAPLGWFGFRVHLAGQAQARQGEAL RVARQVALNLTTIDWQHGDSDVHRILDSATGEFYNDFAERSKPFIEVLRQAKATTVGTVTEAGLESETAD TAQALVAVSVQTSNGGEPDPMPRIWRMRITLERVDDGFKAAKVGFVP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2888 | - | - | 100% (187) | Mce associated membrane protein |
M. marinum M | MMAR_4057 | - | 6e-45 | 51.45% (173) | Mce associated membrane protein |
M. marinum M | MMAR_3994 | - | 2e-23 | 35.38% (195) | hypothetical protein MMAR_3994 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1398c | - | 5e-22 | 32.60% (181) | hypothetical protein Mb1398c |
M. gilvum PYR-GCK | Mflv_0646 | - | 4e-45 | 51.45% (173) | hypothetical protein Mflv_0646 |
M. tuberculosis H37Rv | Rv1972 | - | 3e-58 | 67.68% (164) | mce associated membrane protein |
M. leprae Br4923 | MLBr_02597 | - | 8e-09 | 28.22% (163) | hypothetical protein MLBr_02597 |
M. abscessus ATCC 19977 | MAB_1004c | - | 2e-13 | 29.93% (147) | hypothetical protein MAB_1004c |
M. avium 104 | MAV_2538 | - | 3e-49 | 54.80% (177) | hypothetical protein MAV_2538 |
M. smegmatis MC2 155 | MSMEG_0352 | - | 4e-36 | 40.96% (188) | hypothetical protein MSMEG_0352 |
M. thermoresistible (build 8) | TH_0481 | - | 4e-37 | 47.02% (168) | PROBABLE CONSERVED MCE ASSOCIATED MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_2864 | - | 1e-103 | 97.33% (187) | Mce associated membrane protein |
M. vanbaalenii PYR-1 | Mvan_0519 | - | 3e-44 | 51.16% (172) | hypothetical protein Mvan_0519 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2888|M.marinum_M ----------------MSVMTSPGPPPD--------------------QA MUL_2864|M.ulcerans_Agy99 ----------------MSVVTSPGPPPD--------------------EA Rv1972|M.tuberculosis_H37Rv ----------------MSVAVDSDAEDD--------------------AV Mflv_0646|M.gilvum_PYR-GCK ----------------MTIHTADDPAGDDPTPCSPAPDDTLDVGTDKGAG Mvan_0519|M.vanbaalenii_PYR-1 ----------------MTIHTADDPAGDDPTPCSPALDDTLDVGTDKGAG MAV_2538|M.avium_104 ------------------MEARDDEVED------------YDASVDD--- TH_0481|M.thermoresistible__bu -------------MVDGNVAGAEDVAEAED----------VAEAEDVAEA MSMEG_0352|M.smegmatis_MC2_155 --------------MAVDVDTARHELTQ-------------PGQADDQET Mb1398c|M.bovis_AF2122/97 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREA MAB_1004c|M.abscessus_ATCC_199 ----------MVTMTKEDVDSTNDADTDTADD-KETVDSAAETDSEIAED MLBr_02597|M.leprae_Br4923 ------------------MSPRRKFQAG--------------------EG : MMAR_2888|M.marinum_M LEHRCAD-------------------------SAAEEHRS---------- MUL_2864|M.ulcerans_Agy99 LEHRCAD-------------------------SAAEKHRS---------- Rv1972|M.tuberculosis_H37Rv SEIAEAAGVS---------------------PAPAKPSMS---------- Mflv_0646|M.gilvum_PYR-GCK GAGADSEDPE---------------------VVDGKHQRDTSRAWRNRMP Mvan_0519|M.vanbaalenii_PYR-1 GAGADSEDPE---------------------VVDGKHQRDTSRAWRNRMP MAV_2538|M.avium_104 AAEPDAEDP-----------------------APAKKLRS---------- TH_0481|M.thermoresistible__bu EDVAGAEDVAG-------------------SASPSDDRRS---------F MSMEG_0352|M.smegmatis_MC2_155 DEKSGVDTDS---------------------REPTSAQVR---------- Mb1398c|M.bovis_AF2122/97 LAMAPAEDENVPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVR MAB_1004c|M.abscessus_ATCC_199 AASTDTDAASS-------------------ADSDSETASSDEDGDAAKGA MLBr_02597|M.leprae_Br4923 LLLVSHT-------------------------VASQRRWG---------- . MMAR_2888|M.marinum_M APLRATLFGLAVVVALA---APLGWFGFRVHLAGQAQARQGEALRVARQV MUL_2864|M.ulcerans_Agy99 APLRATLFGLAVVVALA---APLGWFGFRVHLAGQAQARQGQALRVARQV Rv1972|M.tuberculosis_H37Rv APRRMLLFGLVVVVALA---VLLCCWGFRVQRARHAQDQRGHFLQAARQC Mflv_0646|M.gilvum_PYR-GCK PQRLALVMGSVAAVTMG---ALTSWLGFQTHQAHQASEQRQQFVQVGRQG Mvan_0519|M.vanbaalenii_PYR-1 PQRLALVMGSVAAVTMG---ALTSWLGFQTHQAHQASEQRQQFVQVGRQG MAV_2538|M.avium_104 PALLATVFGLVTVVGLA---ALGGWFGYQTYQSHQAQQQRELMVRIGRQG TH_0481|M.thermoresistible__bu PAGWVLLAGGLGVLALCL--TLVGWLGYRAYDSRVDEAQRQLFLQVGRQA MSMEG_0352|M.smegmatis_MC2_155 GVRGALVIGVLLLAIVG---GATGWLVWQTQRAEQDQRMNEMLLQAGREA Mb1398c|M.bovis_AF2122/97 LPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQG MAB_1004c|M.abscessus_ATCC_199 SWVRYAALGAVAAIMVG-ALVFSGIFGWKVWQQHQIDAAGEQALAVAIPY MLBr_02597|M.leprae_Br4923 LPLAATFAALVMVAAIT----ASTLMSISHASRELAVAKDQQVLSYVKWF : MMAR_2888|M.marinum_M ALNLTTIDWQHGDSDVHRILDSATGEFYNDFAERSKPFIEVLRQAKATTV MUL_2864|M.ulcerans_Agy99 ALNLTTIDWQHGDSDVHRILDSATGEFYNDFAERSKPFIEVLRQAKATTV Rv1972|M.tuberculosis_H37Rv ALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTV Mflv_0646|M.gilvum_PYR-GCK ALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKSKSV Mvan_0519|M.vanbaalenii_PYR-1 ALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKSKSV MAV_2538|M.avium_104 ALNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSKSV TH_0481|M.thermoresistible__bu AINLTTIDHTRAEADVQRIIDGSTGGFREDFESRSAPFIEVVRQAESKSE MSMEG_0352|M.smegmatis_MC2_155 AVNLTTMDFEHIREDIQRVLDGSTGTFYDEFEQRAPAFEEVVTKTQSKTE Mb1398c|M.bovis_AF2122/97 VINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTE MAB_1004c|M.abscessus_ATCC_199 TETLTSIDSNDIDESFRKILNGATGDLKKDFTPASVQLRQLLLDNKAASH MLBr_02597|M.leprae_Br4923 MTQFTTLDPYHANDYVARILAQATGDFAKQYNEKVNEILLQVAQAEPAT- :.::* . ::: :** : .:: : : . : : MMAR_2888|M.marinum_M GTVTEAGLESETAD-TAQALVAVSVQTSNGGEPDPMPRIWRMRITLERVD MUL_2864|M.ulcerans_Agy99 GTVTEAGLESETAD-TAQALVAVSVQTSNGGEPDPMPRIWRIRITLERVD Rv1972|M.tuberculosis_H37Rv GTITEAGLQTQTAD-TAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVG Mflv_0646|M.gilvum_PYR-GCK GTITEAGLESHSRD-TAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVG Mvan_0519|M.vanbaalenii_PYR-1 GTITEAGLESHSRD-TAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVG MAV_2538|M.avium_104 GTITEAGLESQSGS-EAQVLVAVSVKTSNLGAAEQDPRHWRMRVIVQKVG TH_0481|M.thermoresistible__bu GTVTEAGLESMDDD-EGQVLVAVSVRTTTPADPEPQPRSWRMRITVQKDH MSMEG_0352|M.smegmatis_MC2_155 GTVTEAGIESVSAD-SARVLVAVSVKTSNIAAPEQRPRLWRMRIDVQRVG Mb1398c|M.bovis_AF2122/97 GTVNATAVESMNEH-SAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEG MAB_1004c|M.abscessus_ATCC_199 GKVVNSAIQYKSTN-KVVLLMMVDQSITNTQRPDPRVDKSRMKITMEKID MLBr_02597|M.leprae_Br4923 GTVLDAGVERWNDDGSANVLVATEVTSKSPDEKQVLENTNRWTATATREG *.: :.:: *: . . . * . MMAR_2888|M.marinum_M DGFKAAKVGFVP MUL_2864|M.ulcerans_Agy99 DGFKAAKVGFVP Rv1972|M.tuberculosis_H37Rv DRVKVSDVGFVP Mflv_0646|M.gilvum_PYR-GCK NDAKVADVEFVP Mvan_0519|M.vanbaalenii_PYR-1 NDAKVADVEFVV MAV_2538|M.avium_104 NDMKVSNVAFVP TH_0481|M.thermoresistible__bu DEAKVSNVEFVP MSMEG_0352|M.smegmatis_MC2_155 DVAKVTNVGFVA Mb1398c|M.bovis_AF2122/97 GQYKMSKVEFVP MAB_1004c|M.abscessus_ATCC_199 GRWLASKLEYL- MLBr_02597|M.leprae_Br4923 NQWKISNLLQVI . :.: :