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M. marinum M MMAR_3802 (porB)

annotation: pyruvate:ferredoxin oxidoreductase PorB, beta subunit
coordinates: 4721509 - 4722600
length: 363

TSVIGNLAGTNLGVTPVFSKNTGVPTTDQPQKGKDFTSDQEVRWCPGCGDYVILNTIRNFLPELGLRREN
IVFISGIGCSSRFPYYLETYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRRNV
NITILLFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDTPFNPVSLALGAEATFVGRALDSDRAGLSEVL
RAATEHRGAALVEILQDCPIFNDGSFDALRKEGSEERVINVHHGEPIVFGANGEYCVVRSGFGLDVAKTA
DVAVDEIVVHDAHADDAAYAFALSRLSDQNLEHTVLGIFRSISRPAYDDAARSQISAARESTPSDSAALQ
SLLRGRDTWTVS*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. marinum M MMAR_3802 porB - 100% (363) pyruvate:ferredoxin oxidoreductase PorB, beta subunit
M. marinum M MMAR_3408 - 6e-09 28.02% (182) pyruvate ferredoxin/flavodoxin oxidoreductase family protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb2481c - 0.0 89.78% (362) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. gilvum PYR-GCK Mflv_2617 - 1e-175 83.71% (356) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. tuberculosis H37Rv Rv2454c - 0.0 89.78% (362) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. leprae Br4923 - - - - -
M. abscessus ATCC 19977 MAB_1595 - 1e-175 83.52% (358) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. avium 104 MAV_1718 orB 0.0 88.67% (362) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. smegmatis MC2 155 MSMEG_4645 orB 1e-173 85.80% (338) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. thermoresistible (build 8) TH_0355 - 1e-178 85.03% (354) PROBABLE OXIDOREDUCTASE (BETA SUBUNIT)
M. ulcerans Agy99 MUL_3725 porB 0.0 98.90% (363) 2-oxoglutarate ferredoxin oxidoreductase subunit beta
M. vanbaalenii PYR-1 Mvan_3964 - 1e-176 83.19% (357) 2-oxoglutarate ferredoxin oxidoreductase subunit beta

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2617|M.gilvum_PYR-GCK          ---MTTARSEADRASAQLVGNDLGLTPGGLTKTSLVPKTDAPQKGKDFTS
Mvan_3964|M.vanbaalenii_PYR-1       --------------MTDLIGSDLGLTPAGLTKTSLVPTTDEPQKAKDFTT
MSMEG_4645|M.smegmatis_MC2_155      --------------------------------MSLVPTADQPQKAKDFTS
TH_0355|M.thermoresistible__bu      -----------------VIGADLGLIPAGLPKTAGVPTTDQPQKGKDFTS
MMAR_3802|M.marinum_M               ----------MTSVIGNLAGTNLGVTPV-FSKNTGVPTTDQPQKGKDFTS
MUL_3725|M.ulcerans_Agy99           ----------MTSVIGNLAGTNLGVTPV-LSKNTGVPTTDQPQKGKDFTS
Mb2481c|M.bovis_AF2122/97           MTRSGDEAQLMTGVTGDLAGTELGLTPS-LTKNAGVPTTDQPQKGKDFTS
Rv2454c|M.tuberculosis_H37Rv        MTRSGDEAQLMTGVTGDLAGTELGLTPS-LTKNAGVPTTDQPQKGKDFTS
MAV_1718|M.avium_104                ----------MTDVVGNLAGKDLGLTAK-LTKNDGVPTTDQPQKAKDFTS
MAB_1595|M.abscessus_ATCC_1997      -----MTDLLNEASTANGTGSLNGLELG-LTANALVPTTDEEQKAKDFTS
                                                                       **.:*  **.****:

Mflv_2617|M.gilvum_PYR-GCK          DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIAFVSGIGCSSRFPYYLE
Mvan_3964|M.vanbaalenii_PYR-1       DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIAFVSGIGCSSRFPYYLE
MSMEG_4645|M.smegmatis_MC2_155      DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIAFVSGIGCSSRFPYYLE
TH_0355|M.thermoresistible__bu      DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIAFISGIGCSSRFPYYLE
MMAR_3802|M.marinum_M               DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLE
MUL_3725|M.ulcerans_Agy99           DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLE
Mb2481c|M.bovis_AF2122/97           DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLE
Rv2454c|M.tuberculosis_H37Rv        DQEVRWCPGCGDYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLE
MAV_1718|M.avium_104                DQEVRWCPGCGDYVILNTIRNFLPDLGLRRENIVFISGIGCSSRFPYYLE
MAB_1595|M.abscessus_ATCC_1997      DQEVRWCPGCGDYVILNTIRGFLPELGLKRENIVFISGIGCSSRFPYYLD
                                    ********************.***:***:****.*:*************:

Mflv_2617|M.gilvum_PYR-GCK          TYGFHSIHGRAPTIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRR
Mvan_3964|M.vanbaalenii_PYR-1       TYGFHSIHGRAPTIATGLALARPDLSVWVVTGDGDALSIGGNHLIHALRR
MSMEG_4645|M.smegmatis_MC2_155      TYGFHSIHGRAPTIATGLALARPDLSVWVVTGDGDSLSIGGNHLIHALRR
TH_0355|M.thermoresistible__bu      TYGFHSIHGRAPTIATGLALARPDLSVWVVTGDGDALSIGGNHLIHALRR
MMAR_3802|M.marinum_M               TYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRR
MUL_3725|M.ulcerans_Agy99           TYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHAVRR
Mb2481c|M.bovis_AF2122/97           TYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRR
Rv2454c|M.tuberculosis_H37Rv        TYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRR
MAV_1718|M.avium_104                TYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRR
MAB_1595|M.abscessus_ATCC_1997      TYGMHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHTLRR
                                    ***:********:********* ************:**********::**

Mflv_2617|M.gilvum_PYR-GCK          NINITILLFNNRIYGLTKGQYSPTSETGKVTKSTPMGSLDYPFNPVSLAL
Mvan_3964|M.vanbaalenii_PYR-1       NINVTILLFNNRIYGLTKGQYSPTSETGKVTKSTPMGSLDYPFNPVSLAL
MSMEG_4645|M.smegmatis_MC2_155      NINITILLFNNRIYGLTKGQYSPTSEVGKITKSTPMGSLDYPFNPVSLAL
TH_0355|M.thermoresistible__bu      NMNITILLFNNRIYGLTKGQYSPTSEVGKITKSTPMGSLDHPFNPVSLAL
MMAR_3802|M.marinum_M               NVNITILLFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDTPFNPVSLAL
MUL_3725|M.ulcerans_Agy99           NVNITILLFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDTPFNPVSLAL
Mb2481c|M.bovis_AF2122/97           NINVTILLFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDHPFNPVSLAL
Rv2454c|M.tuberculosis_H37Rv        NINVTILLFNNRIYGLTKGQYSPTSEVGKVTKSTPMGSLDHPFNPVSLAL
MAV_1718|M.avium_104                NVNITILLFNNRIYGLTKGQYSPTSEVGKITKSTPMGSLDHPFNPVSLAL
MAB_1595|M.abscessus_ATCC_1997      NVNLTILLFNNRIYGLTKGQYSPTSETGKVTKSTPMGSLDYPFNPVSLAL
                                    *:*:**********************.**:********** *********

Mflv_2617|M.gilvum_PYR-GCK          GAEATFVGRALDSDRKGLTEVLRGAAEHRGAALVEIMQDCPIFNDGSFDA
Mvan_3964|M.vanbaalenii_PYR-1       GAEATFVGRALDSDRKGLSEVLRGAAQHRGAALVEIMQDCPIFNDGSFDA
MSMEG_4645|M.smegmatis_MC2_155      GAEATFVGRALDSDRKGLSEVLRGAAEHRGAALVEIMQDCPIFNDGSFDA
TH_0355|M.thermoresistible__bu      GAEATFVGRALDSDRKGLTEVLRGAAQHRGAALVEIMQDCPIFNDGSFDA
MMAR_3802|M.marinum_M               GAEATFVGRALDSDRAGLSEVLRAATEHRGAALVEILQDCPIFNDGSFDA
MUL_3725|M.ulcerans_Agy99           GAEATFVGRALDSDRAGLSEVLRAATEHRGAALVEILQDCPIFNDGSFDA
Mb2481c|M.bovis_AF2122/97           GAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCPIFNDGSFDA
Rv2454c|M.tuberculosis_H37Rv        GAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCPIFNDGSFDA
MAV_1718|M.avium_104                GAEATFVGRALDSDRAGLTEVLQAAAGHRGAAVVEILQDCPIFNDGSFDV
MAB_1595|M.abscessus_ATCC_1997      GAEATFVGRALDSDKKGLSEVLRAAAAHRGAALVEILQDCPIFNDGSFDL
                                    **************: **:***:.*: *****:***:************ 

Mflv_2617|M.gilvum_PYR-GCK          LRKEGAEERLINLAHGEPITFGADGEYCVVKSGYGLEVAKTADVSAEEIV
Mvan_3964|M.vanbaalenii_PYR-1       LRKEGAEERLINVTHGEPITFGADGEYCVVKSGYGLEVAKTADVPADEIV
MSMEG_4645|M.smegmatis_MC2_155      LRKEGAEERLINLTHGEPITFGADGEYAVVKSGYGLEIAKTAEVSADDIV
TH_0355|M.thermoresistible__bu      LRKEGSEERLINLKHGEPIVFGANGEYCVIQSGYGLEVAKTADVSAEQIV
MMAR_3802|M.marinum_M               LRKEGSEERVINVHHGEPIVFGANGEYCVVRSGFGLDVAKTADVAVDEIV
MUL_3725|M.ulcerans_Agy99           LRKEGSEERVINVHHGEPIVFGANGEYCVVRSGFGLDVAKIADVAVDEIV
Mb2481c|M.bovis_AF2122/97           LRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEII
Rv2454c|M.tuberculosis_H37Rv        LRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEII
MAV_1718|M.avium_104                LRKEGAEERVISVRHGEPIVFGANGEYCVVQSGFGLEVAKTADVSVDEIV
MAB_1595|M.abscessus_ATCC_1997      LRKEGAEQRVINVRHGEPITFGAEGELCVIRSGFGLEVAKTADVKVEDIV
                                    *****:*:*:*.: *****.***:** .*::**:**::** *:*  ::*:

Mflv_2617|M.gilvum_PYR-GCK          VHDATLQDPAYAFALSRLSEQNLDHMVMGIFRRVNKPTYDDAAREQIASA
Mvan_3964|M.vanbaalenii_PYR-1       VHDATLQDPAYAFALSRLSEQNLDHMVMGIFRQVSKPTYDDAARQQLATA
MSMEG_4645|M.smegmatis_MC2_155      VHDAQIDDPAYAFALSRLSEQNLDHMVMGIFRKVSRPTYDDAARQQVATA
TH_0355|M.thermoresistible__bu      VHDAQIDDPAYAFALSRLSEQNLEHMVMGIFRQVSRPTYDDAARAQIAAA
MMAR_3802|M.marinum_M               VHDAHADDAAYAFALSRLSDQNLEHTVLGIFRSISRPAYDDAARSQISAA
MUL_3725|M.ulcerans_Agy99           VHDAHADDAAYAFALSRLSDQNLEHTVVGIFRSISRPAYDDAARSQISAA
Mb2481c|M.bovis_AF2122/97           VHDAQVDDPAYAFALSRLSDQNLDHTVLGIFRHISRPTYDDAARSQVVAA
Rv2454c|M.tuberculosis_H37Rv        VHDAQVDDPAYAFALSRLSDQNLDHTVLGIFRHISRPTYDDAARSQVVAA
MAV_1718|M.avium_104                VHDAHTDNSAYAFALSRLSDQNLEHTVLGIFRDISRPTYDDAARAQVQAA
MAB_1595|M.abscessus_ATCC_1997      VHDAHSDDPAYAFALSRLSEQDLEHTVMGVFRSVQRPTYDDLAREQLTAA
                                    ****  ::.**********:*:*:* *:*:** :.:*:*** ** *: :*

Mflv_2617|M.gilvum_PYR-GCK          RSSRAHDTAALQSLLRGKDTWTVD
Mvan_3964|M.vanbaalenii_PYR-1       REAKAHDTAALQSLLRGKDTWTVD
MSMEG_4645|M.smegmatis_MC2_155      IESRPHDTAALQSLLRGKDTWTVD
TH_0355|M.thermoresistible__bu      RADKAHDTQALQALLRGKDTWTVD
MMAR_3802|M.marinum_M               RESTPSDSAALQSLLRGRDTWTVS
MUL_3725|M.ulcerans_Agy99           RESTPSDSAALQSLLRGRDTWTVS
Mb2481c|M.bovis_AF2122/97           RNAAPSGTAALQSLLHGRDTWTVD
Rv2454c|M.tuberculosis_H37Rv        RNAAPSGTAALQSLLHGRDTWTVD
MAV_1718|M.avium_104                QSAKAFDSAALQSLLRGRDTWTVD
MAB_1595|M.abscessus_ATCC_1997      AAAKPSDTAALQALLTGRDTWTVS
                                        . .: ***:** *:*****.

species	id	gene	e-value	identity (len)	annotation
M. marinum M	MMAR_3802	porB	-	100% (363)	pyruvate:ferredoxin oxidoreductase PorB, beta subunit
M. marinum M	MMAR_3408	-	6e-09	28.02% (182)	pyruvate ferredoxin/flavodoxin oxidoreductase family protein