For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTTARPAKPRNEGQWALGNREPLNANEELKKAGNPLDVRERIENIYAKAGFDSIDKSDLRGLFRWWGLYT QREQGYDGSWTGDENIDKLEAKYFMLRVRCDGGALSAAALRTLGAISTEFARDTADISDRENLQYHWIEV EKVPEIWRRLDEVGLHTTEACGDCPRVVLGSPLAGESLDEVLDPTWAIDEIVRRYIGKPDFADLPRKYKT AISGLQDVVHEVNDVAFIGVNHPEHGPGLDLWVGGGLSTNPMLAKRVGAWVPLEEVPEVWAAVTSVFRDY GYRRLRSKARLKFLIKDWGIEKFREVLETEYLKRPLIDGPAPEPAKHPIDHVGVQRLKNGHNAVGVSPIA GRVSGTILTAVAELAERAGSDRIRFTPYQKLVILDIPDDKLDETIAGLQALGLRAQPSHWRRNLMACSGI EFCKLSFAETRVRAQSLVPELEERLDDLNSTLDVPVTVNINGCPNSCARIQVADIGFKGQMVDDGAGGQV EGFQVHLGGSLGLDSGFGRKLRQHKVTSDELGDYIDRVVRNFVKNRAAGERFAQWAIRAEEDDLR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3710 | nirA_2 | - | 100% (555) | ferredoxin-dependent nitrite reductase, NirA_2 |
M. marinum M | MMAR_3416 | nirA | 0.0 | 75.50% (555) | ferredoxin-dependent nitrite/sulphite reductase NirA |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2412 | nirA | 0.0 | 90.81% (555) | ferredoxin-dependant nitrite reductase NIRA |
M. gilvum PYR-GCK | Mflv_2686 | - | 0.0 | 82.10% (553) | ferredoxin--nitrite reductase |
M. tuberculosis H37Rv | Rv2391 | nirA | 0.0 | 90.81% (555) | ferredoxin-dependent nitrite reductase NIRA |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1662c | - | 0.0 | 78.62% (552) | sulfite reductase |
M. avium 104 | MAV_1787 | - | 0.0 | 87.57% (555) | sulfite reductase |
M. smegmatis MC2 155 | MSMEG_4527 | - | 0.0 | 84.24% (552) | ferredoxin sulfite reductase |
M. thermoresistible (build 8) | TH_1443 | nirA | 0.0 | 83.33% (552) | PROBABLE FERREDOXIN-DEPENDENT NITRITE REDUCTASE NIRA |
M. ulcerans Agy99 | MUL_3652 | nirA_2 | 0.0 | 99.28% (555) | ferredoxin-dependent nitrite reductase, NirA_2 |
M. vanbaalenii PYR-1 | Mvan_3857 | - | 0.0 | 80.39% (561) | ferredoxin--nitrite reductase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2686|M.gilvum_PYR-GCK --------MTTAKT---------PPAKPAKRPRGEGQWALGYREPLNPNE Mvan_3857|M.vanbaalenii_PYR-1 --------MTTAQD---------KPVKPVKRPRGEGQWALGYREPLNPNE MSMEG_4527|M.smegmatis_MC2_155 --------MTSSEAPAKTAEKPAPKTRPAKRPRGEGQWALGYREPLNANE MMAR_3710|M.marinum_M ----------------------MTTARPAK-PRNEGQWALGNREPLNANE MUL_3652|M.ulcerans_Agy99 ----------------------MTTARPAK-PRNEGQWALGNREPFNANE Mb2412|M.bovis_AF2122/97 ------MSAKENPQ--------MTTARPAK-ARNEGQWALGHREPLNANE Rv2391|M.tuberculosis_H37Rv ------MSAKENPQ--------MTTARPAK-ARNEGQWALGHREPLNANE MAV_1787|M.avium_104 MLAALAIFFRGERP--------MTTARPAK-ARNEGQWALGNREPLNPNE TH_1443|M.thermoresistible__bu --------MTEAKT--------QAKPRPARKPRSEGQWALGERDPLNPNE MAB_1662c|M.abscessus_ATCC_199 --------MTTSET---------RPARPKQ-QRSEGQWALGELEPLNSNE :* : *.******* :*:*.** Mflv_2686|M.gilvum_PYR-GCK QSKKDDNPLNVRERIENIYAKNGFESIDKGDLRGRFRWWGLYTQRKPGYD Mvan_3857|M.vanbaalenii_PYR-1 RSKRDDNPLNVRARIENIYAQGGFDSIDKGDLRGRFRWWGLYTQRKPGYD MSMEG_4527|M.smegmatis_MC2_155 QAKKDDNPLNVRARIENIYAKNGFESIDKGDLRGRFRWWGLYTQRKPGYD MMAR_3710|M.marinum_M ELKKAGNPLDVRERIENIYAKAGFDSIDKSDLRGLFRWWGLYTQREQGYD MUL_3652|M.ulcerans_Agy99 ELKKAGNPLDVRERIENIYAKAGFDSIDKSDLRGLFRWWGLYTQREQGYD Mb2412|M.bovis_AF2122/97 ELKKAGNPLDVRERIENIYAKQGFDSIDKTDLRGRFRWWGLYTQREQGYD Rv2391|M.tuberculosis_H37Rv ELKKAGNPLDVRERIENIYAKQGFDSIDKTDLRGRFRWWGLYTQREQGYD MAV_1787|M.avium_104 EMKQAGAPLAVRERIETIYAKNGFDSIDKSDLRGRFRWWGLYTQREQGYD TH_1443|M.thermoresistible__bu QFKQEDDALNVRDRIINTYAKNGFDSIDKTDLRGRFRWMGLYTQREQGYD MAB_1662c|M.abscessus_ATCC_199 QVKKDDHPLNVRERIETIYSKQGFDSIDKADLRGRFRWWGLYTQRKQGYD . *: . .* ** ** . *:: **:**** **** *** ******: *** Mflv_2686|M.gilvum_PYR-GCK GTWTGDENTDMLEDEYFMLRVRSDGGALTAAALRTLGTISTEFARDTADI Mvan_3857|M.vanbaalenii_PYR-1 GTWTGDENTDMLEDSYFMLRVRSDGGALSAEALRTLGGISTEFARDTADL MSMEG_4527|M.smegmatis_MC2_155 GTWTGDENTDMLEDEYFMLRVRCDGGALTTAALRTLGGISTEFARDTADI MMAR_3710|M.marinum_M GSWTGDENIDKLEAKYFMLRVRCDGGALSAAALRTLGAISTEFARDTADI MUL_3652|M.ulcerans_Agy99 GSWTGDENIDKLEAKYFMLRVRCDGGALSTAALRTLGAISTEFARDTADI Mb2412|M.bovis_AF2122/97 GTWTGDDNIDKLEAKYFMMRVRCDGGALSAAALRTLGQISTEFARDTADI Rv2391|M.tuberculosis_H37Rv GTWTGDDNIDKLEAKYFMMRVRCDGGALSAAALRTLGQISTEFARDTADI MAV_1787|M.avium_104 GSWTGDENIEKLEARYFMMRVRCDGGAISAAALRTLGQISVDFARDTADI TH_1443|M.thermoresistible__bu GTWTGDENADLLEAKYFMMRVRCDGKALSAAALRTLGEISTEFARDTADI MAB_1662c|M.abscessus_ATCC_199 GTWTGDDNTDMLEDDHFMLRVRCDGGALTTQALRTIGELSTQYARDTADI *:****:* : ** :**:***.** *::: ****:* :*.::******: Mflv_2686|M.gilvum_PYR-GCK SDRQNVQYHWIDVKDMPEIWRRLDEVGLQTTEACGDCPRVVLGSPLAGES Mvan_3857|M.vanbaalenii_PYR-1 SDRQNVQYHWIEVENMPEIWRRLDAVGLQTTEACGDCPRVVLGSPLAGES MSMEG_4527|M.smegmatis_MC2_155 SDRENVQYHWIQVENMPEIWKRLDAVGLQTTEACGDCPRVVLGSPLAGES MMAR_3710|M.marinum_M SDRENLQYHWIEVEKVPEIWRRLDEVGLHTTEACGDCPRVVLGSPLAGES MUL_3652|M.ulcerans_Agy99 SDRENLQYHWIEVEKVPEIWRRLDEVGLHTTEACGDCPRVVLGSPLAGES Mb2412|M.bovis_AF2122/97 SDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGSPLAGES Rv2391|M.tuberculosis_H37Rv SDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGSPLAGES MAV_1787|M.avium_104 TDRENIQYHWIEVENVPEIWRRLDAVGLRTTEACGDCPRVILGSPLAGES TH_1443|M.thermoresistible__bu SDRMNLQYHWIEIENVPEIWRRLDEHGLQTTEACGDCPRALLGSPLAGES MAB_1662c|M.abscessus_ATCC_199 SDRQNVQYHWIRVEDMPEIWRRLDEVGLYTTQACGDCPRVILGSPLAGES :** *:***** ::.:****:*** ** **:*******.:********* Mflv_2686|M.gilvum_PYR-GCK LDEVIDGTPAVNEIVKRYIGKKEYSNLPRKFKTAISGLQDVVHEVNDVAF Mvan_3857|M.vanbaalenii_PYR-1 LDEVIDGTPAVDEIVKRYIGKPEYSNLPRKFKTAISGLQDVVHEVNDVAF MSMEG_4527|M.smegmatis_MC2_155 LDEVIDGTPAIDEIVRRYIGKPEYSNLPRKFKTAISGLQDVVHEVNDVAF MMAR_3710|M.marinum_M LDEVLDPTWAIDEIVRRYIGKPDFADLPRKYKTAISGLQDVVHEVNDVAF MUL_3652|M.ulcerans_Agy99 LDEVLDPTWAIDEIVRRYIGKPDFADLPRKYKTAISGLQDVVHEVNDVAF Mb2412|M.bovis_AF2122/97 LDEVLDPTWAIEEIVRRYIGKPDFADLPRKYKTAISGLQDVAHEINDVAF Rv2391|M.tuberculosis_H37Rv LDEVLDPTWAIEEIVRRYIGKPDFADLPRKYKTAISGLQDVAHEINDVAF MAV_1787|M.avium_104 LEEVIDPSWAIAEIARRYIGQPEFADLPRKYKTAISGLQDVAHEVNDVAF TH_1443|M.thermoresistible__bu LDEVLDPTPALDEIVRRYIGNPEYSNLPRKYKTAISGLQDVAHEVNDVAF MAB_1662c|M.abscessus_ATCC_199 LDEVLDPTWAIDEITRRYIGNKEYANLPRKFKTAISGLQDVVHEINDVAF *:**:* : *: **.:****: ::::****:**********.**:***** Mflv_2686|M.gilvum_PYR-GCK IGVNHPEHGPGFDLWVGGGLSTNPMLGQRVGAWVPLDEVPDVWEGVVSVF Mvan_3857|M.vanbaalenii_PYR-1 IGVNHPEHGPGFDLWVGGGLSTNPMLAQRVGVWVPLDEVPDVWEGVVSVF MSMEG_4527|M.smegmatis_MC2_155 IGVNHPEHGPGFDLWVGGGLSTNPMLAQRVGVWVPLDEVPDVWEGVVSIF MMAR_3710|M.marinum_M IGVNHPEHGPGLDLWVGGGLSTNPMLAKRVGAWVPLEEVPEVWAAVTSVF MUL_3652|M.ulcerans_Agy99 IGVNHPEHGPGLDLWVGGGLSTNPMLAKRVGAWVPLEEVPEVWAAVTSVF Mb2412|M.bovis_AF2122/97 IGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLGEVPEVWAAVTSVF Rv2391|M.tuberculosis_H37Rv IGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLGEVPEVWAAVTSVF MAV_1787|M.avium_104 IGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLHEVPEVWAAVTSVF TH_1443|M.thermoresistible__bu IGVNHPEHGPGLDLWVGGGLSTNPMLAQRVGAWVPLDEVPDVWEAVTAVF MAB_1662c|M.abscessus_ATCC_199 VGVVHPEHGPGLDIWVGGGLSTNPMLAQRLGAWVPLDEVPDVWEGVVGIF :** *******:*:************.:*:*.**** ***:** .*..:* Mflv_2686|M.gilvum_PYR-GCK RDYGYRRLRAKARLKFLIKDWGVEKFRQVLEEEYLKRPLIDGPAPEPVTR Mvan_3857|M.vanbaalenii_PYR-1 RDYGYRRLRSKARLKFLIKDWGAQKFREVLETEYLHRPLLDGPAPEPVTR MSMEG_4527|M.smegmatis_MC2_155 RDYGYRRLRSKARLKFLIKDWGVEKFREVLETEYLKRPLIDGPAPEPVTR MMAR_3710|M.marinum_M RDYGYRRLRSKARLKFLIKDWGIEKFREVLETEYLKRPLIDGPAPEPAKH MUL_3652|M.ulcerans_Agy99 RDYGYRRLRSKARLKFLIKDWGIEKFREVLETEYLKRPLIDGPAPEPAKH Mb2412|M.bovis_AF2122/97 RDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLIDGPAPEPVKH Rv2391|M.tuberculosis_H37Rv RDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLIDGPAPEPVKH MAV_1787|M.avium_104 RDYGYRRLRSKARLKFLVKDWGIEKFREVLETEYLKRPLIDGPAPEPVAH TH_1443|M.thermoresistible__bu RDYGYRRLRSKARLKFLIKDWGVEKFREVLETEYLKRPLIDGPAPEPVKH MAB_1662c|M.abscessus_ATCC_199 RDYGYRRLRSKARLKFLVKDWGVAKFREILETEYLKRPLIDGPAPVPPTH *********:*******:**** ***::** ***:***:***** * : Mflv_2686|M.gilvum_PYR-GCK PIDHVGVQKLKNGLNAVGVAPIAGRVSGTILTKVADLAEAAGSDRIRFTP Mvan_3857|M.vanbaalenii_PYR-1 PIDHVGVQKLKNGLNAVGVAPIAGRVSGTILTKVADLAEAAGSDRIRFTP MSMEG_4527|M.smegmatis_MC2_155 PIDHVGVQKLKNGLNAVGVAPIAGRVSGTILTKVADLAEAAGSDRIRFTP MMAR_3710|M.marinum_M PIDHVGVQRLKNGHNAVGVSPIAGRVSGTILTAVAELAERAGSDRIRFTP MUL_3652|M.ulcerans_Agy99 PIDHVGVQRLKNGHNAVGVSPIAGRVSGTILTAVAELAERAGSDRIRFTP Mb2412|M.bovis_AF2122/97 PIDHVGVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTP Rv2391|M.tuberculosis_H37Rv PIDHVGVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTP MAV_1787|M.avium_104 PIDHVGVQRLKNGLNAVGVAPIAGRVSGTILLAVADLAQQAGCDRIRFTP TH_1443|M.thermoresistible__bu PIDHVGVQKLKNGLNAVGIAPIAGRVSGTILQAVADLMAQAGSDRARFTP MAB_1662c|M.abscessus_ATCC_199 PIDHVGVQRLKNGLNAIGISAIAGRVSGTILSAIADLAEKAGSNRVALTP ********:**** **:*::.********** :*:* **.:* :** Mflv_2686|M.gilvum_PYR-GCK YQKLIVLDVPDDKLDELRAGLDALGLPSTPSHWRRNLMACTGIEFCKLSF Mvan_3857|M.vanbaalenii_PYR-1 YQKLIILDVADENVAKLVEQLDALGLPSTPSHWRRNLMACTGIEFCKLSF MSMEG_4527|M.smegmatis_MC2_155 YQKLIILDVPDDKIDELRAGLDALGLPSTPSHWRRNLMACTGIEFCKLSF MMAR_3710|M.marinum_M YQKLVILDIPDDKLDETIAGLQALGLRAQPSHWRRNLMACSGIEFCKLSF MUL_3652|M.ulcerans_Agy99 YQKLVILDIPDDKLDETIAGLQALGLRAQPSHWRRNLMACSGIEFCKLSF Mb2412|M.bovis_AF2122/97 YQKLVILDIPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSF Rv2391|M.tuberculosis_H37Rv YQKLVILDIPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSF MAV_1787|M.avium_104 YQKLVLLDIPDDKLDEVVAGLEALGLQSQPSHWRRNLMACSGIEFCKLSF TH_1443|M.thermoresistible__bu YQKLIVLDIADDKLDEFTAGLDRLGLQWQPSHWRRNLMACTGIEFCKLSF MAB_1662c|M.abscessus_ATCC_199 HQKLIILDVSDDELPALEAGLNALGLPSRPSHWRKNLLACTGIEYCKLSF :***::**:.* : *: *** *****:**:**:***:***** Mflv_2686|M.gilvum_PYR-GCK AETRSRSQVLVPELEKRLEDINAQLDVPVTININGCPNSCARIQVADIGF Mvan_3857|M.vanbaalenii_PYR-1 AETRSRSQVLVPELEKRLDDINAQLDVPVTININGCPNSCARIQVADIGF MSMEG_4527|M.smegmatis_MC2_155 AETRKRAQVLVPELEKRLDDINAQLDVPITVNINGCPNSCARIQVADIGF MMAR_3710|M.marinum_M AETRVRAQSLVPELEERLDDLNSTLDVPVTVNINGCPNSCARIQVADIGF MUL_3652|M.ulcerans_Agy99 AETRVRAQSLVPELEERLDDINSTLDVPVAVNINGCPNSCARIQVADIGF Mb2412|M.bovis_AF2122/97 AETRVRAQHLVPELERRLEDINSQLDVPITVNINGCPNSCARIQIADIGF Rv2391|M.tuberculosis_H37Rv AETRVRAQHLVPELERRLEDINSQLDVPITVNINGCPNSCARIQIADIGF MAV_1787|M.avium_104 AETRVRAQGLVPELERRLADVNRQLDVPITINLNGCPNSCARIQVADIGL TH_1443|M.thermoresistible__bu TETRVRAQSLVPELEKRLEDINARLDVPITVNINGCPNSCARIQVADIGF MAB_1662c|M.abscessus_ATCC_199 TETRVRAQSLVPELEKRLDDLNAQIDTPVTINMNGCPNSCARSQTADIGF :*** *:* ******.** *:* :*.*:::*:********* * ****: Mflv_2686|M.gilvum_PYR-GCK KGQMVDDGDG-PEEGFQVHLGGSLGLDSGFGRKLRQHKVVATELGDYIER Mvan_3857|M.vanbaalenii_PYR-1 KGQMVDDGNG-PEEGFQVHLGGSLGLDSGFGRKLRQHKVLATELGDYIER MSMEG_4527|M.smegmatis_MC2_155 KGQMVDDGNG-PEEGFQVHLGGSLGLDSGFGRKLRQHKVLSSELGDYIER MMAR_3710|M.marinum_M KGQMVDDGAGGQVEGFQVHLGGSLGLDSGFGRKLRQHKVTSDELGDYIDR MUL_3652|M.ulcerans_Agy99 KGQMVDDGAGGQVEGFQVHLGGSLGLDSGFGRKLRQHKVTSDELGDYIDR Mb2412|M.bovis_AF2122/97 KGQMIDDGHGGSVEGFQVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDR Rv2391|M.tuberculosis_H37Rv KGQMIDDGHGGSVEGFQVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDR MAV_1787|M.avium_104 KGQMVDDGEGGSVEGFQVHLGGSLGQDSGFGRKLRQHKVTSDELGDYIER TH_1443|M.thermoresistible__bu KGMIVDDGDG-PEEGFQVHLGGGLGLDSGFGRKLRQHRVLSSELGDYIDR MAB_1662c|M.abscessus_ATCC_199 KGQMVDDGNGNSVEGFQVHLGGSLGLDSGFGRKLRQHKVTSTELGDYIDR ** ::*** * ********* ** *:*********:* : ******:* Mflv_2686|M.gilvum_PYR-GCK VVRNFVKQREQGERFATWALRADDADLR Mvan_3857|M.vanbaalenii_PYR-1 VVRNFVKQREDGERFATWALRADEADLR MSMEG_4527|M.smegmatis_MC2_155 VVRNFVKQREDGERFAQWAVRADEADLR MMAR_3710|M.marinum_M VVRNFVKNRAAGERFAQWAIRAEEDDLR MUL_3652|M.ulcerans_Agy99 VVRNFVKNRAAGERFAQWAIRAEEDDLR Mb2412|M.bovis_AF2122/97 VVRNFVKHRSEGERFAQWVIRAEEDDLR Rv2391|M.tuberculosis_H37Rv VVRNFVKHRSEGERFAQWVIRAEEDDLR MAV_1787|M.avium_104 VARNFLKYRGEGERFAQWAMRADEDDLR TH_1443|M.thermoresistible__bu VVRNFVKQREDGERFATWALRADEADLR MAB_1662c|M.abscessus_ATCC_199 VVRNFVAQRTDGERFAQWAVRAEEADLR *.***: * ***** *.:**:: ***