For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGRGTSGNRRLGVDDWVQAGFEILAEEGLSSLKLDQLCARLGVTKGSFYWHFADMEGYRHALVEAWAQFR DEDRDEIEGLREVEPRERLALMMALLARPRLWKLERAMREWARSDKTVAAAVLSADRRMVRAVQQAFCDY GFDADEAEMRANTAFAAGLGLLHMSGSALKGLFGSALKRQTAAPERNWFLEFLLRE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3423 | - | - | 100% (197) | putative transcriptional regulatory protein |
| M. marinum M | MMAR_0470 | - | 2e-05 | 27.04% (159) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4460 | - | 7e-52 | 58.33% (168) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_01070 | - | 5e-05 | 25.79% (159) | putative TetR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3078 | - | 3e-15 | 31.76% (148) | TetR family transcriptional regulator |
| M. avium 104 | MAV_2167 | - | 2e-45 | 46.89% (177) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_6293 | - | 2e-46 | 51.90% (158) | transcriptional regulatory protein |
| M. thermoresistible (build 8) | TH_0904 | - | 2e-55 | 56.22% (185) | transcriptional regulatory protein |
| M. ulcerans Agy99 | MUL_2701 | - | 1e-109 | 97.97% (197) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_1901 | - | 3e-54 | 60.74% (163) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3423|M.marinum_M --------MAGRGTSG----NRRLGVDD----WVQAGFEILAEEGLSSLK
MUL_2701|M.ulcerans_Agy99 --------MAGRSTSG----NRRLGVDD----WVQAGFEILAEEGLISLK
MAV_2167|M.avium_104 -----------------------------------MGYTVLAEEGVRALK
MSMEG_6293|M.smegmatis_MC2_155 --------MAREPRRA----PGTLTADD----WLQAGYELLASDGMRALK
Mflv_4460|M.gilvum_PYR-GCK --------MAKSGES-----AGRLSVDD----WIQAGYAIIADEGRSALK
Mvan_1901|M.vanbaalenii_PYR-1 --------MPKGRAN-----TGRLSADD----WIQAGYAILADDGLEALK
TH_0904|M.thermoresistible__bu --------MTRPTDPRKPQVTARLSEED----WIQAGFAILAEEGIKALK
MAB_3078|M.abscessus_ATCC_1997 -------------------MTEKVSRDD----YFTAAFELLAAGGKSALT
MLBr_01070|M.leprae_Br4923 MIVVGNFTQSNYVPASRGRRSSQLSGDDREQAILAVAERLLAERPLGDFS
. ::* :.
MMAR_3423|M.marinum_M LDQLCARLGVTKGSFYWHFADMEGYRHALVEAWA-QFRDEDRDEIEGLRE
MUL_2701|M.ulcerans_Agy99 LDQLCARLGVTKGSFYWHFADMEGYRHALVEAWA-QFRDEDRDEIEGLSE
MAV_2167|M.avium_104 VERLCQQAGVTRGSFYWHFEDIDNYRAALVESWN-KFLERDRQALAELDS
MSMEG_6293|M.smegmatis_MC2_155 IERLCEQVGATRGSFYWHFTDMKAYRAALVASWN-TFLENDRRSLAEMED
Mflv_4460|M.gilvum_PYR-GCK IDRLCTRLGVTKGSFYWHFRDMAAYRAALVQAWA-ELRDSDRSHFGDLGD
Mvan_1901|M.vanbaalenii_PYR-1 LDRLCTRLGVTKGSFYWHFADMAAYRSALVHAWA-QLHDRDRRHFADLGH
TH_0904|M.thermoresistible__bu LDRLCARLAVTKGSFYWHFESMAGFRRRLVESWA-ELRDRDRRDFDALGA
MAB_3078|M.abscessus_ATCC_1997 TTAVCRRIGMTTGSLYHHFGSGAAFYRAVIDYWENDVTVAQRRRVDAVAD
MLBr_01070|M.leprae_Br4923 VDELAKGAGISRPTFYFYFPSKNAVLLSLLDDLN----MKSRSAVEALAE
:. . : ::* :* . :: .* . :
MMAR_3423|M.marinum_M VEPRERLALMMALLARPRLWKLERAMREWARSDKTVAAAVLSADRRMVRA
MUL_2701|M.ulcerans_Agy99 VEPRERLALMMALLARPRLWKLERAMREWARSDKTVAAAVLSADRRMVRA
MAV_2167|M.avium_104 LPPRERLSAMMGTLVSPQYWMLERAMREWARLDPVAAENIRAADRHLLRT
MSMEG_6293|M.smegmatis_MC2_155 LPPRERLSKMIEALMSPQHWMLERAMREWARTDEIAAANVRAADHRVRMA
Mflv_4460|M.gilvum_PYR-GCK LTPRERLTRMMASLLGERQWTLERAMREWARTDPVVADSVHNADLLVLGA
Mvan_1901|M.vanbaalenii_PYR-1 LTPRARLGQMMTSLLGERQWTLERAMREWARTDPGVAESVRAADHRVLDA
TH_0904|M.thermoresistible__bu LPPRERLSRMMTALTSPRHWMLERAMREWARTDSAAAASVRTADRRVLDA
MAB_3078|M.abscessus_ATCC_1997 --PRERLATLEQAAR-EADHEVEKAIRSWAMADRYVAAAQQRVDQVRHEH
MLBr_01070|M.leprae_Br4923 QLPADPAAVWRSAIT--AFFEVCGTHRAVAVAG-AAAKATSPEVRRLWST
* : : * * . .*
MMAR_3423|M.marinum_M VQQAFCDYGFDADEAEMRANTAFAAG------LGLLHMSGSALKGLFGSA
MUL_2701|M.ulcerans_Agy99 VQQAFCDYGFDADEAEMRANTAFAAV------LGLLHMSGSALKGLFGSA
MAV_2167|M.avium_104 VTKAYRDYGFSPEDAKLRAELTFAAG------IGLLHLTGSAEQ------
MSMEG_6293|M.smegmatis_MC2_155 VIKAFEDHGFDPDEARLRGEATFAAG------IGMLHLIDSAEA------
Mflv_4460|M.gilvum_PYR-GCK VRDAFLAAGFDDDDADVRANATFAAG------IGFLHLSAAPPD------
Mvan_1901|M.vanbaalenii_PYR-1 VRHAFADAGFDADEADMRANAVFAAG------IGFLHLSDAPPG------
TH_0904|M.thermoresistible__bu VRQAFLDHGFDPADADLRANATFAAG------IGFLHLAGDRPG------
MAB_3078|M.abscessus_ATCC_1997 LTKHYIEAGFTPARADTLARIGFSIL------VGAQQFGTRVDHK-----
MLBr_01070|M.leprae_Br4923 VMQQWIDYNTAAIQAERKCGVAPDTIPAEDLAVALQLMTERVMAATFSDE
: . : . * :. :
MMAR_3423|M.marinum_M LKRQTAAPERNWFLEFLLRE-------
MUL_2701|M.ulcerans_Agy99 LKRQTAAPERNWFLEFLLRE-------
MAV_2167|M.avium_104 -AQSLAQRER--FLDLMLTEAGVASDH
MSMEG_6293|M.smegmatis_MC2_155 -LATSGRPDR--FLDIMLAPAS-----
Mflv_4460|M.gilvum_PYR-GCK -ARLTEQRER--FLDLMLSR-------
Mvan_1901|M.vanbaalenii_PYR-1 -ARMDAQRER--FLDLMLAR-------
TH_0904|M.thermoresistible__bu -AHGIAHRER--FLELMLTP-------
MAB_3078|M.abscessus_ATCC_1997 -RLNSALDEYSAWVNSSVSAEVTTSH-
MLBr_01070|M.leprae_Br4923 KPLIPDKKVIDTLVHIWLASIYGS---
:. :