For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPTDAQALLQKSGGFATTAQLLTVMTRQQLDVRVRNGSLVRVWHGVYAAEEPNLLGRLTALDVFMGRPVV ACMGTAATLYGFDTECSSAVHVLDPGVRMRPTVGLMVHQRIGARLQRVAGRLATAPAWTAVEVARALRRP RALATLDAALRSMQCTRDQIESAVAEQHGRRGIVAVRELLPLADPRAESAMESETRLVMIDGGLARPELQ YLIHGSDGELWRVDFAWPDLRLAAEYDSIDWHAGRVEMLRDKTRWAKIQDLGWTIIPIVVDDVRREPGRL VQRIGNHLDRLRAAS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3341 | - | - | 100% (295) | hypothetical protein MMAR_3341 |
| M. marinum M | MMAR_1222 | - | 9e-93 | 59.72% (288) | hypothetical protein MMAR_1222 |
| M. marinum M | MMAR_0375 | - | 1e-19 | 32.29% (192) | hypothetical protein MMAR_0375 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2272 | - | 1e-126 | 80.74% (270) | hypothetical protein Mb2272 |
| M. gilvum PYR-GCK | Mflv_1335 | - | 1e-104 | 65.97% (288) | hypothetical protein Mflv_1335 |
| M. tuberculosis H37Rv | Rv2248 | - | 1e-127 | 81.11% (270) | hypothetical protein Rv2248 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3617 | - | 2e-72 | 50.36% (276) | hypothetical protein MAB_3617 |
| M. avium 104 | MAV_0642 | - | 6e-23 | 29.03% (248) | hypothetical protein MAV_0642 |
| M. smegmatis MC2 155 | MSMEG_1733 | - | 3e-73 | 51.37% (292) | hypothetical protein MSMEG_1733 |
| M. thermoresistible (build 8) | TH_1835 | - | 3e-30 | 54.31% (116) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_1301 | - | 1e-153 | 98.15% (271) | hypothetical protein MUL_1301 |
| M. vanbaalenii PYR-1 | Mvan_5457 | - | 1e-111 | 69.61% (283) | hypothetical protein Mvan_5457 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3341|M.marinum_M MPTDAQALLQKSGGFATTAQLLTVMTRQQLDVRVRNGSLVRVWHGVYAAE
MUL_1301|M.ulcerans_Agy99 ------------------------MTGQQLDVRVRNGSLVRVWHGVYAAE
Mb2272|M.bovis_AF2122/97 ------------------------MTRQQLDVQVKNGGLVRVWYGVYAAQ
Rv2248|M.tuberculosis_H37Rv ------------------------MTRQQLDVQVKNGGLVRVWYGVYAAQ
Mflv_1335|M.gilvum_PYR-GCK MRKVLDEVLRRCNGYATTAALLDVMSRQQLDGLVRRRELVRVWHGVYAVA
Mvan_5457|M.vanbaalenii_PYR-1 MEHAVEDLFRNSGGYATTAALLRVMSRQQLDVRVRKGELIRVWHGVYAAT
MSMEG_1733|M.smegmatis_MC2_155 MNPQLMRLFDDQRGVATSGQILGLITRYAFDQALKTGVLERIWPGIYCLG
TH_1835|M.thermoresistible__bu --------------------------------------------------
MAB_3617|M.abscessus_ATCC_1997 MHPSIRALFHG-RGAIRAGELQEILSAKRISSLIRDGHLHRPWHGVYTLP
MAV_0642|M.avium_104 --------------MAEPFIGSEAVASGLVTPYALRSRFVRVHPDVYVPA
MMAR_3341|M.marinum_M EPNLLGRLTALDVFMGRPVVACMG--TAATLYGFDTECSSAVHVLDPG-V
MUL_1301|M.ulcerans_Agy99 EPNLLGRLTALDVFMGRPVVACMG--TAATLYGFDTECSSAVHVLDPG-V
Mb2272|M.bovis_AF2122/97 EPDLLGRLAALDVFMGGHAVACLG--TAAALYGFDTENTVAIHMLDPG-V
Rv2248|M.tuberculosis_H37Rv EPDLLGRLAALDVFMGGHAVACLG--TAAALYGFDTENTVAIHMLDPG-V
Mflv_1335|M.gilvum_PYR-GCK QPDSRGRLNSLDAFLGQHAVACLG--TAASLYGFDTEATETVHILDPG-A
Mvan_5457|M.vanbaalenii_PYR-1 EPDYLGRLQALDSYIGQPAVACMG--TAAVLYGFDNEATSAVHILDPG-V
MSMEG_1733|M.smegmatis_MC2_155 EPTEPLLLRGLDLSAGTRVAACLT--TAAALHGFDTEGSTDLHVLNPPRH
TH_1835|M.thermoresistible__bu --------------------------------------------------
MAB_3617|M.abscessus_ATCC_1997 NPTVEIQLRALDLVADAHVPVCMG--TAAASYGFDTERDGALHVINPVPG
MAV_0642|M.avium_104 GTALSAGLRARSAWLWSRRRGVVAGRSAAALYGTKWIDDRAPAQLLYPYR
MMAR_3341|M.marinum_M RMRPTVGLMVHQRIGARLQRVAG----RLATAPAWTAVEVARALRRPRAL
MUL_1301|M.ulcerans_Agy99 RMRPTIGLMVHQRIGARLQRVAG----QLATAPPWTAAEVARALRRPRAL
Mb2272|M.bovis_AF2122/97 RMRPTVGLMVHQRVGARLQRVSG----RLATAPAWTAVEVARQLRRPRAL
Rv2248|M.tuberculosis_H37Rv RMRPTVGLMVHQRVGARLQRVSG----RLATAPAWTAVEVARQLRRPRAL
Mflv_1335|M.gilvum_PYR-GCK RVRPVDGLMVHQRVGAPLRRVDG----RLATAPAWTAVEVARVLPRPRAL
Mvan_5457|M.vanbaalenii_PYR-1 RVRPTVGLMVHQRVGAPLGRVRG----RLATSPAWTAVEVARTLHRPRAL
MSMEG_1733|M.smegmatis_MC2_155 QLRSVDGLVVHRREGAPLTVIDVDGDVRYVTAPAWTAVEVARALRRPRAL
TH_1835|M.thermoresistible__bu --------------------------------------------------
MAB_3617|M.abscessus_ATCC_1997 QLRPRPNLVVHQRLGAPLRYVDG----RLTTAPDWTAIEIARTLRPSRAI
MAV_0642|M.avium_104 RPPDGIQTWSDRLVGDEIQTIGG----MPVTTPARTALDIACRSPVDKAV
MMAR_3341|M.marinum_M ATLDAALRSMQCTRDQIESAVAEQHGRRGIVAVRELLPLADPRAESAMES
MUL_1301|M.ulcerans_Agy99 ATLDAALRSMQCTRDQIESAVAEQHGRRGIVAVRELLPLADPRAESAMES
Mb2272|M.bovis_AF2122/97 ATLEAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMES
Rv2248|M.tuberculosis_H37Rv ATLDAALRSMRCARSEIENAVAEQRGRRGIVAARELLPFADGRAESAMES
Mflv_1335|M.gilvum_PYR-GCK ATLDAALHSGLCTAVELGAAAHEQRGRRGIVKVRELLAIADGRAESPMES
Mvan_5457|M.vanbaalenii_PYR-1 ATLDAALRTGLCTPVELHAAVTEQRGRRGIVAVRELLPLADARAESPMES
MSMEG_1733|M.smegmatis_MC2_155 ATLDAALRSGKCTRADVWRAALDQAGRRGIVAVRNLIALADPRAESPMES
TH_1835|M.thermoresistible__bu -----------------------------------LIAIADGRAESPMES
MAB_3617|M.abscessus_ATCC_1997 GTLDAALRSGHCSPGGLRHAARMQAGRRGIVHVRGLLTHADGRSESPMES
MAV_0642|M.avium_104 AAIDALARATELKVLEIELLADRYRGRRGITRARNVLPLVDAGAESPRET
::. .* :**. *:
MMAR_3341|M.marinum_M ETRLVMIDGGLARPELQYLIHGSDGELWRVDFAWPDLRLAAEYDSIDWHA
MUL_1301|M.ulcerans_Agy99 ETRLVMIDGGLARPELQYLIHGSDGELWRVDFAWPDLRLAAEYDSIDWHA
Mb2272|M.bovis_AF2122/97 EARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHA
Rv2248|M.tuberculosis_H37Rv EARLVMIDHGLPLPELQYPIHGHGGEMWRVDFAWPDMRLAAEYESIEWHA
Mflv_1335|M.gilvum_PYR-GCK EARLVMHDHDLPRPELQYVIDGTHDDMWRVDFAWPEHHVAAEYDSMDWHS
Mvan_5457|M.vanbaalenii_PYR-1 EARLAMHDYGVPRPELQYVVHGAWDS-WRVDFAWPEVLVAAEYESVDWHT
MSMEG_1733|M.smegmatis_MC2_155 EARLMMLDAGLPAPELQHEVIDGMGKLRRLDFAWPECRVAVEYDGDDWHG
TH_1835|M.thermoresistible__bu EARLAMIDGGLPIPELQYELRDGAGRLRRVDFAWPRHRVAVEYDGVDWHS
MAB_3617|M.abscessus_ATCC_1997 ETRLLFIDSGVPAPELQATICDRYGTVWRVDFLWRSARLIGEYDSDEWHS
MAV_0642|M.avium_104 WLRLLLLRAGFPRPRTQLPVRQYGALIACLDMGWEDIKLAVEYDGDQHRT
** : ... *. * : :*: * : **:. : :
MMAR_3341|M.marinum_M GRVEMLRDKTRWAKIQDLGWTIIPIVVDDVRREPGRLVQRIGNHLDRLRA
MUL_1301|M.ulcerans_Agy99 GRVEMLRDKTRWAKIQDLGWTIIPIVVDDVRREPGRLVQRIGNHLDRLRA
Mb2272|M.bovis_AF2122/97 GPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARM
Rv2248|M.tuberculosis_H37Rv GPAEMLRDKTRWAKLQELGWTIVPIVVDDVRREPGRLAARIARHLDRARM
Mflv_1335|M.gilvum_PYR-GCK GRVAMLRDRARYAGIQHARWTVIPIVVTDVRVHPARLAARIADHLLRAAS
Mvan_5457|M.vanbaalenii_PYR-1 GRDAMLKDKARFAGLQHAAWTVIPITVTDVRISPERLAERIKEHLWRAAH
MSMEG_1733|M.smegmatis_MC2_155 NPDALRNDRVRAAALSDVGWLVIAIVSEDVRLRPQETVGRIDRQLGLARA
TH_1835|M.thermoresistible__bu GPDAMRRDRDRTAALMDVGWTVIAIVLEDVRYRTREFVGRVDAQLRRAQA
MAB_3617|M.abscessus_ATCC_1997 GPAAMRKDKLKTARLQECGWTVIPITVDDIRRHRDELVARINTHLRHHAA
MAV_0642|M.avium_104 DRRQFTKDIRRAEVLAELGWTVVRVTAEDT---PAGIIARVPTAWTRRAC
. : .* : : . * :: :. * *:
MMAR_3341|M.marinum_M AS---------
MUL_1301|M.ulcerans_Agy99 AS---------
Mb2272|M.bovis_AF2122/97 AG---------
Rv2248|M.tuberculosis_H37Rv AG---------
Mflv_1335|M.gilvum_PYR-GCK -----------
Mvan_5457|M.vanbaalenii_PYR-1 TASSHKLAL--
MSMEG_1733|M.smegmatis_MC2_155 A----------
TH_1835|M.thermoresistible__bu A----------
MAB_3617|M.abscessus_ATCC_1997 -----------
MAV_0642|M.avium_104 TGSEKPARNSR