For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KFYVSSAFLNTSEIIEIAKAADELGYDGIGIPDHVVNLETLQTPYPYTKDGQRRWQPFTDWPDPWVLVGA LAQVTRRLKFVTTVYIPAMRNPYSAAKAIGTAALLASGRVELGVGVGWCAEEFALMGEQFAARGKRTDEM LALMKRLWEPGWTEFEGRFYQTPRLEMQPTPPPIPIYVGGLSDIALRRAARYDGWIGDLIKTERAIEAVG RLRELRAENGLPVDDFTILTPLTDAFTPADYQRAEDAGITGIITMPWMFYTGPDAGLDAKIDGMARFRND LSLDG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3291 | - | - | 100% (286) | hypothetical protein MMAR_3291 |
| M. marinum M | MMAR_5009 | - | 2e-56 | 40.93% (281) | oxidoreductase |
| M. marinum M | MMAR_4568 | - | 4e-39 | 36.97% (284) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0965c | - | 2e-42 | 39.58% (288) | oxidoreductase |
| M. gilvum PYR-GCK | Mflv_2912 | - | 1e-133 | 76.14% (285) | luciferase family protein |
| M. tuberculosis H37Rv | Rv0940c | - | 2e-42 | 39.58% (288) | oxidoreductase |
| M. leprae Br4923 | MLBr_00926 | - | 1e-20 | 54.55% (88) | hypothetical protein MLBr_00926 |
| M. abscessus ATCC 19977 | MAB_2449 | - | 1e-38 | 36.75% (283) | hypothetical protein MAB_2449 |
| M. avium 104 | MAV_2247 | - | 1e-150 | 87.76% (286) | hypothetical protein MAV_2247 |
| M. smegmatis MC2 155 | MSMEG_2811 | - | 2e-31 | 34.96% (246) | hydride transferase 1 |
| M. thermoresistible (build 8) | TH_4357 | - | 1e-133 | 77.27% (286) | PUTATIVE transcriptional regulator, Fis family |
| M. ulcerans Agy99 | MUL_1338 | - | 1e-118 | 98.56% (208) | hypothetical protein MUL_1338 |
| M. vanbaalenii PYR-1 | Mvan_3595 | - | 1e-131 | 74.74% (285) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0965c|M.bovis_AF2122/97 ----MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIPDSIAYPFESDSKY
Rv0940c|M.tuberculosis_H37Rv ----MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIPDSIAYPFESDSKY
MAB_2449|M.abscessus_ATCC_1997 ----MRFTFAEAMTDPSYYIPLAQAAEAAGYDGMTIADSLAYPYESDAKY
MMAR_3291|M.marinum_M ----MKFYVSSAFLNTSEIIEIAKAADELGYDGIGIPDHVVNLETLQTPY
MUL_1338|M.ulcerans_Agy99 --------------------------------------------------
MAV_2247|M.avium_104 ----MRFYVSSAFLNTREIIEIARAADELGYDGIGIPDHVVNLETLDTPY
Mflv_2912|M.gilvum_PYR-GCK ----MKFYVSTAFLDTREAVEIARAADDLGYHGMAIPDHVVNLETLQTPY
Mvan_3595|M.vanbaalenii_PYR-1 ----MKFYVSTAFLDTREAVEIAKAADDLGYHGMAIPDHVINLETLQTPY
TH_4357|M.thermoresistible__bu ----VKFYISPAFLRTGEIVEIAKAAEDLGYDGIAIPDHVVNLESLDTPY
MLBr_00926|M.leprae_Br4923 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 MQISLHALGIGAGARREIIDAVAVAAERAGFTTLWCGEHVVMVDRPRSRY
Mb0965c|M.bovis_AF2122/97 PYTPDGNREFMDGKPFIETFVLTAALGAVTTRLRFNFFVLKLPIRPPALV
Rv0940c|M.tuberculosis_H37Rv PYTPDGNREFMDGKPFIETFVLTAALGAVTTRLRFNFFVLKLPIRPPALV
MAB_2449|M.abscessus_ATCC_1997 PYTPDGNREFLEGKPFIEALTLTAALGAVTSTLRFNIFVLKLPIRPPALV
MMAR_3291|M.marinum_M PYTKDGQRRWQPFTDWPDPWVLVGALAQVTRRLKFVTTVYIPAMRNPYSA
MUL_1338|M.ulcerans_Agy99 -------------------------MIQHQCALKFVTTVYIPAMRNPYSA
MAV_2247|M.avium_104 PYTRDGQRRWQPFTDWPDPWVLIGALAQVTTRLRFVNTVYIPAMRNPYSA
Mflv_2912|M.gilvum_PYR-GCK PYTKDGKRRWEAFTDWPDPWVMIGAVALVTSRLHFVTTVYLPAMRDPYSA
Mvan_3595|M.vanbaalenii_PYR-1 PYTKDGQRRWEAFTDWPDPWVMIGAIALATTRLRFVTTVYLPAMRDPYSA
TH_4357|M.thermoresistible__bu PYTRDGRRRWEPFTDWPDPWVLIGALAQATSRLRFVTTVYIPAMRDPYSA
MLBr_00926|M.leprae_Br4923 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 PYSADGRIAVAADADWLDPMIALSFAAAATSTIRIATGVLLLPEHNPVIM
Mb0965c|M.bovis_AF2122/97 AKQAGSLAALIGNRVGLGVGTSPWPEDYELMGVPFAKRGKRIDECIEIVR
Rv0940c|M.tuberculosis_H37Rv AKQAGSLAALIGNRVGLGVGTSPWPEDYELMGVPFAKRGKRIDECIEIVR
MAB_2449|M.abscessus_ATCC_1997 AKQASSIAALTGNRLGLGVGTSPWPEDYELMNVPFAKRGKRMDECIEIIQ
MMAR_3291|M.marinum_M AKAIGTAALLASGRVELGVGVGWCAEEFALMGEQFAARGKRTDEMLALMK
MUL_1338|M.ulcerans_Agy99 AKAIGTAALLASGRVELGVGVGWCAEEFALMGEQFAARGKRTDEILALMK
MAV_2247|M.avium_104 AKAIGTAAVLASGRVELGVGVGWCREEFALMGERFEARGKRTDEIIELMR
Mflv_2912|M.gilvum_PYR-GCK AKAIGTAAVLASGRLELGIGVGWCREEFELLGQQFERRGKRTDEMLELMK
Mvan_3595|M.vanbaalenii_PYR-1 AKAIGTAAVLAGGRLELGVGVGWCREEFELLGQQFERRGRRTDEMLELMK
TH_4357|M.thermoresistible__bu AKAIGTAAFLAGGRVELGVGVGWCAEEFALMGQRFDRRGRRTDEMLRLFR
MLBr_00926|M.leprae_Br4923 ----------------------------------MSPTG----------H
MSMEG_2811|M.smegmatis_MC2_155 AKQAASVDQLSGGRLLLGVGIGWSREEFEALGVPFARRGARTAEYVEAMR
: * :
Mb0965c|M.bovis_AF2122/97 GLTTGDYFEFHGEFYDIPKTKMTPAP-TQPIPILVGGHADAALRRAARA-
Rv0940c|M.tuberculosis_H37Rv GLTTGDYFEFHGEFYDIPKTKMTPAP-TQPIPILVGGHADAALRRAARA-
MAB_2449|M.abscessus_ATCC_1997 GLTTGDYFEFHGEFYDIPKTKMCPAP-TAPIPILVGGHADAALRRAARC-
MMAR_3291|M.marinum_M RLWEPGWTEFEGRFYQTPRLEMQPT--PPPIPIYVGGLSDIALRRAARY-
MUL_1338|M.ulcerans_Agy99 RLWEPGWTEFEGRFYQTSRLEMQPT--PPPIPIYVGGLSDIALRRAARY-
MAV_2247|M.avium_104 ALWAPGWTEFEGEFYSAPRLEMQPT--PPPIPVYVGGLSDIALRRAARS-
Mflv_2912|M.gilvum_PYR-GCK ALWSPGWTEFSGEFYTAPRLEMEPT--PPPIPVYVGGLSDIALRRAARH-
Mvan_3595|M.vanbaalenii_PYR-1 ALWSPGWTEFSGEFYTAPRMEMEPT--PPPIPIYVGGLSDIALRRAARH-
TH_4357|M.thermoresistible__bu ALWQPGWTEFHGEFYTTPRLEMEPT--PPHIPIYVGGLSENALRRAARH-
MLBr_00926|M.leprae_Br4923 CVWR----------YSQP---------HRPIPILYRGFGETALRSVARH-
MSMEG_2811|M.smegmatis_MC2_155 TLWRQDVADFTGEFAAFDAVRLHPKPSAGSIPIIVGGNGDRALARVASWG
: **: * .: ** .*
Mb0965c|M.bovis_AF2122/97 DGWMH-GGGDPDELDRLIARVKRLREEAGKTS-PFEIHVISLDGFTVDGV
Rv0940c|M.tuberculosis_H37Rv DGWMH-GGGDPDELDRLIARVKRLREEAGKTS-PFEIHVISLDGFTVDGV
MAB_2449|M.abscessus_ATCC_1997 DGWMH-GGG-TEDLDELLATLNKFREEEGTVEKPFEVHVISVDGFTVDGV
MMAR_3291|M.marinum_M DGWIG-DLIKTERAIEAVGRLRELRAENGLPVDDFTILTPLTDAFTPADY
MUL_1338|M.ulcerans_Agy99 DGWIG-DLIKTERAIEAVGRLRELRAENGLPVDDFTILTPLTDAFTPADY
MAV_2247|M.avium_104 DGWIG-DLIKTERAIEAVGRLRELRAENGLTMDDFTILTPLTDAFTTADY
Mflv_2912|M.gilvum_PYR-GCK DGWIG-DLISLDRALERVSAVRALRAENGLDMDGFEVITPLTDAFTPEHY
Mvan_3595|M.vanbaalenii_PYR-1 DGWIG-DLITTDKALERIATLRGLRAENGLDMHGFEVITPLTDAFTAEHY
TH_4357|M.thermoresistible__bu DGWIG-DLISTDRAIGIARRLHQLRRENGLPADDFTILTPLTDALVRADY
MLBr_00926|M.leprae_Br4923 NGYLG-DRIRTDSAIAAADRLQELRIGKGVSLDDFTVLTGLTDAGSITSY
MSMEG_2811|M.smegmatis_MC2_155 DGWYGFNLDGVAAVGERMDMLRRLCARAGRDVDDLHCAVALQAP-AVGDI
:*: . :. : * : .
Mb0965c|M.bovis_AF2122/97 KRLEDKGVTDVIVGFRVPYTMGPDTEPLQTKIRNLEMFAENVIAKV--
Rv0940c|M.tuberculosis_H37Rv KRLEDKGVTDVIVGFRVPYTMGPDTEPLQTKIRNLEMFAENVIAKV--
MAB_2449|M.abscessus_ATCC_1997 KRLEDKGVTDVIVGFRIPYIVGPDTEPLDTKIRNLESFAEHVISKVNP
MMAR_3291|M.marinum_M QRAEDAGITGIITMPWMFYTG--PDAGLDAKIDGMARFRNDLSLDG--
MUL_1338|M.ulcerans_Agy99 QRAEDAGITGIITMPWMFYTG--PDAGLDAKIDGMARFRKDLSLDG--
MAV_2247|M.avium_104 RRAEDAGITGIITMPWMFYAG--PQASLDDKIDGMQRFRKDLALDG--
Mflv_2912|M.gilvum_PYR-GCK ARAAAGGITGIITMPWMFYSG--PDAPLDQKIDGMRRFREDLGLD---
Mvan_3595|M.vanbaalenii_PYR-1 ERAEAGGITGIITMPWMFYSG--PDASLPDKVDGMRRFRKDLGLD---
TH_4357|M.thermoresistible__bu DRAAAAGITHILTQPWMFYTG--PQATLAEKIDGMKRYRKDLALDG--
MLBr_00926|M.leprae_Br4923 WCAEDADITGILTMLRMFYVE--SATTLVNKS-------KDLTLDS--
MSMEG_2811|M.smegmatis_MC2_155 PALVDLGVDELVIVESPPQDPDVAADWVDALADRWITCI---------
.: :: :