For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TIHTADDPAGDDPTPCSPAPDDTLDVGTDKGAGGAGADSEDPEVVDGKHQRDTSRAWRNRMPPQRLALVM GSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVGRQGALNLTTIDWQHADVDVKRILDSATGTFYDEF SQRSQPFIDVVNKVKSKSVGTITEAGLESHSRDTAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQKVGND AKVADVEFVP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0646 | - | - | 100% (221) | hypothetical protein Mflv_0646 |
M. gilvum PYR-GCK | Mflv_2107 | - | 1e-55 | 52.24% (201) | hypothetical protein Mflv_2107 |
M. gilvum PYR-GCK | Mflv_2526 | - | 1e-21 | 30.97% (155) | hypothetical protein Mflv_2526 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1398c | - | 3e-29 | 36.56% (186) | hypothetical protein Mb1398c |
M. tuberculosis H37Rv | Rv1972 | - | 3e-45 | 49.73% (185) | mce associated membrane protein |
M. leprae Br4923 | MLBr_02597 | - | 5e-09 | 28.82% (170) | hypothetical protein MLBr_02597 |
M. abscessus ATCC 19977 | MAB_4593c | - | 1e-10 | 22.12% (226) | hypothetical protein MAB_4593c |
M. marinum M | MMAR_4057 | - | 5e-60 | 58.71% (201) | Mce associated membrane protein |
M. avium 104 | MAV_2538 | - | 2e-58 | 69.62% (158) | hypothetical protein MAV_2538 |
M. smegmatis MC2 155 | MSMEG_0352 | - | 4e-42 | 47.80% (182) | hypothetical protein MSMEG_0352 |
M. thermoresistible (build 8) | TH_2113 | - | 6e-42 | 39.62% (212) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3924 | - | 1e-59 | 55.87% (213) | Mce associated membrane protein |
M. vanbaalenii PYR-1 | Mvan_0519 | - | 1e-125 | 99.55% (220) | hypothetical protein Mvan_0519 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0646|M.gilvum_PYR-GCK ----------------------------------MTIHTADDPAGDDPTP Mvan_0519|M.vanbaalenii_PYR-1 ----------------------------------MTIHTADDPAGDDPTP MMAR_4057|M.marinum_M ---------------------MSDSTTLEEQPEPAEVVEPEGESGQAGVP MUL_3924|M.ulcerans_Agy99 ---------------------MSDSTTLEEQPEPAEVVEPEGESGQAGVP MAV_2538|M.avium_104 -------------------------------------------------- Rv1972|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_0352|M.smegmatis_MC2_155 --------------------------MAV---DVDTAR---------HEL TH_2113|M.thermoresistible__bu --------------------------MAEPTPDQDDVRDPDATESTSAEL Mb1398c|M.bovis_AF2122/97 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREA MAB_4593c|M.abscessus_ATCC_199 ----------------MADDAADKDAKNADESAVTSDAEKAESSAPSSAA MLBr_02597|M.leprae_Br4923 -------------------------------------------------- Mflv_0646|M.gilvum_PYR-GCK CSPAPDDTLDVGTDKG----AGGAGADSEDPEVVDGKHQRDT-----SRA Mvan_0519|M.vanbaalenii_PYR-1 CSPALDDTLDVGTDKG----AGGAGADSEDPEVVDGKHQRDT-----SRA MMAR_4057|M.marinum_M EAQPRDEDQDETADETQDETQEDADADPEAGEDDAQASDGEQ-----ESP MUL_3924|M.ulcerans_Agy99 EAQPRDEDQDETADET----QEDADADPEAGEDDAQASDGEQ-----ESP MAV_2538|M.avium_104 -MEARDDE------------VEDYDAS----VDDAAEPDAED-----PAP Rv1972|M.tuberculosis_H37Rv MSVAVDSD------------AEDDAVS------EIAEAAGVS-----PAP MSMEG_0352|M.smegmatis_MC2_155 TQPGQADDQETD-----EKSGVDTDSR----------EPTS-------AQ TH_2113|M.thermoresistible__bu AATGADADGETAAAADTDSPGLGTESEKAGPGEERDTEPATNPEHGAGKS Mb1398c|M.bovis_AF2122/97 LAMAPAEDENVPEEYADWEDAEDYDDYDDYEAADQEAARSASWR---RRL MAB_4593c|M.abscessus_ATCC_199 VESTAEGTTEAATAEVADFDAEDSEKTKDSGAVEDSDDEDISLEPD-EEE MLBr_02597|M.leprae_Br4923 --------------------MSPRRKFQAGEGLLLVSHTVAS-------- Mflv_0646|M.gilvum_PYR-GCK WRNRMPPQRLALVMGSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVG Mvan_0519|M.vanbaalenii_PYR-1 WRNRMPPQRLALVMGSVAAVTMGALTSWLGFQTHQAHQASEQRQQFVQVG MMAR_4057|M.marinum_M -KPAPSKVRLAIVVGLAAVVAMAALASWFGFHAYQSHQADQQRKLYVQVA MUL_3924|M.ulcerans_Agy99 -KPAPSKVRLAIVVGLAAVVAMAALASWFGFHAYQSHQADQQRKLYVQVA MAV_2538|M.avium_104 AKKLRSPALLATVFGLVTVVGLAALGGWFGYQTYQSHQAQQQRELMVRIG Rv1972|M.tuberculosis_H37Rv AKPSMSAPRRMLLFGLVVVVALAVLLCCWGFRVQRARHAQDQRGHFLQAA MSMEG_0352|M.smegmatis_MC2_155 VRG----VRGALVIGVLLLAIVGGATGWLVWQTQRAEQDQRMNEMLLQAG TH_2113|M.thermoresistible__bu VRGWITPIRLAGIIGLVLVLALGGAVGWLGYRTYQMQRDADLRAQFLEAG Mb1398c|M.bovis_AF2122/97 RVRLPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGA MAB_4593c|M.abscessus_ATCC_199 NPKRIRGRHWALTAAAIVAIAIVALAAIIGRLYEEQRIEEQSSREALAAA MLBr_02597|M.leprae_Br4923 --QRRWGLPLAATFAALVMVAAITASTLMSISHASRELAVAKDQQVLSYV . Mflv_0646|M.gilvum_PYR-GCK RQGALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKS Mvan_0519|M.vanbaalenii_PYR-1 RQGALNLTTIDWQHADVDVKRILDSATGTFYDEFSQRSQPFIDVVNKVKS MMAR_4057|M.marinum_M RQGAINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIQVVQHFQS MUL_3924|M.ulcerans_Agy99 RQGAINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIKVVQHFQS MAV_2538|M.avium_104 RQGALNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQS Rv1972|M.tuberculosis_H37Rv RQCALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKA MSMEG_0352|M.smegmatis_MC2_155 REAAVNLTTMDFEHIREDIQRVLDGSTGTFYDEFEQRAPAFEEVVTKTQS TH_2113|M.thermoresistible__bu RQGAFALTNVNWEQADADVQRILDAATGSFYDDMQRRAPSYTELVKQAQS Mb1398c|M.bovis_AF2122/97 KQGVINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKV MAB_4593c|M.abscessus_ATCC_199 QEFANVMINVDSAKLDESSNKTLERSTGDFKQKYSESSTTLRQVMIENKA MLBr_02597|M.leprae_Br4923 KWFMTQFTTLDPYHANDYVARILAQATGDFAKQYNEKVNEILLQVAQAEP : : .:: : : : :** * .. . : . : Mflv_0646|M.gilvum_PYR-GCK KSVGTITEAGLESHSRD-TAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQ Mvan_0519|M.vanbaalenii_PYR-1 KSVGTITEAGLESHSRD-TAQVLVAVSVKTTVGDGPEQEPRAWRMRVTVQ MMAR_4057|M.marinum_M KSVGTITAAALESESDD-AAQVLVAVSVKTTTAGAPEQRPRAWRMRITVQ MUL_3924|M.ulcerans_Agy99 KSVGTITAAALESESDD-AAQVLVAVSVKTTTAAAPEQRPRAWRMRITVQ MAV_2538|M.avium_104 KSVGTITEAGLESQSGS-EAQVLVAVSVKTSNLGAAEQDPRHWRMRVIVQ Rv1972|M.tuberculosis_H37Rv STVGTITEAGLQTQTAD-TAQALVAVSVQTSNAGEADPVPRAWRMRITVQ MSMEG_0352|M.smegmatis_MC2_155 KTEGTVTEAGIESVSAD-SARVLVAVSVKTSNIAAPEQRPRLWRMRIDVQ TH_2113|M.thermoresistible__bu VSKGDVTEVGLESFSEK-QGTVLASVIIESSNVGVPEQQPQAWRMRLIVD Mb1398c|M.bovis_AF2122/97 VTEGTVNATAVESMNEH-SAVVLVAATSRVTNSAGAKDEPRAWRLKVTVT MAB_4593c|M.abscessus_ATCC_199 KATGVVVDSAVKSAAPD-KVEVLLFIDQAVSNVAIPDARMDRSRVQITMQ MLBr_02597|M.leprae_Br4923 -ATGTVLDAGVERWNDDGSANVLVATEVTSKSPDEKQVLENTNRWTATAT : * : .:: .* . . * Mflv_0646|M.gilvum_PYR-GCK KVGNDAKVADVEFVP Mvan_0519|M.vanbaalenii_PYR-1 KVGNDAKVADVEFVV MMAR_4057|M.marinum_M QVGDEAKVANVEFVP MUL_3924|M.ulcerans_Agy99 QVGDEAKVANVEFVP MAV_2538|M.avium_104 KVGNDMKVSNVAFVP Rv1972|M.tuberculosis_H37Rv RVGDRVKVSDVGFVP MSMEG_0352|M.smegmatis_MC2_155 RVGDVAKVTNVGFVA TH_2113|M.thermoresistible__bu KVGSEAKVSAVEFVQ Mb1398c|M.bovis_AF2122/97 EEGGQYKMSKVEFVP MAB_4593c|M.abscessus_ATCC_199 KVDGRWLASDVELT- MLBr_02597|M.leprae_Br4923 REGNQWKISNLLQVI . .. : : .