For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTDLIVRKMRFAFADHYVPFLWNEKNPAFSSMANAVSFLAIAFEKMVVSMISEAKPMITDPAIAEEADAF VRQEGQHSMAHRQHARGLIKSYPALKETLDEVIAAFDDLTASKPLKYRLAYTADLEATFTPAFKLMLDHD DTLFAPGDDRVASLFLWHFVEEVEHRSSALIIYDAVADDPWYRMRVAPSIFKHVWSVLQIACHGFNKHVP VEERKVDALSMFGMQRQKKALMQRLPFFDVADDGPLGNAFGHLPWREQLIAMFGVVRSQIPGHNPAHENL PALADEWFKRYAAGYDVTQWYTAPVQQLARDR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2810 | - | - | 100% (312) | hypothetical protein MMAR_2810 |
M. marinum M | MMAR_1931 | - | 2e-07 | 24.62% (199) | hypothetical protein MMAR_1931 |
M. marinum M | MMAR_3143 | - | 1e-06 | 26.35% (167) | hypothetical protein MMAR_3143 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2799c | - | 2e-06 | 23.78% (185) | hypothetical protein Mb2799c |
M. gilvum PYR-GCK | Mflv_3010 | - | 1e-135 | 74.92% (303) | hypothetical protein Mflv_3010 |
M. tuberculosis H37Rv | Rv2777c | - | 2e-06 | 23.78% (185) | hypothetical protein Rv2777c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4764c | - | 1e-153 | 84.16% (303) | hypothetical protein MAB_4764c |
M. avium 104 | MAV_4121 | - | 2e-07 | 23.63% (182) | FF domain-containing protein |
M. smegmatis MC2 155 | MSMEG_2108 | - | 1e-152 | 84.16% (303) | hypothetical protein MSMEG_2108 |
M. thermoresistible (build 8) | TH_1630 | - | 1e-88 | 52.48% (303) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2157 | - | 1e-07 | 24.62% (199) | hypothetical protein MUL_2157 |
M. vanbaalenii PYR-1 | Mvan_3497 | - | 1e-140 | 76.38% (309) | hypothetical protein Mvan_3497 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2810|M.marinum_M -------------------------------------------------- MAB_4764c|M.abscessus_ATCC_199 -------------------------------------------------- MSMEG_2108|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_3010|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3497|M.vanbaalenii_PYR-1 -------------------------------------------------- TH_1630|M.thermoresistible__bu -------------------------------------------------- Mb2799c|M.bovis_AF2122/97 MNVEVHSAPGWRAGSSPLGYAQLYLPTRDVYWGDMSGIYVNAVATFSEGA Rv2777c|M.tuberculosis_H37Rv MNVEVHSAPGWRAGSSPLGYAQLYLPTRDVYWGDMSGIYVNAVATFSEGA MUL_2157|M.ulcerans_Agy99 -------------------------------------------------- MAV_4121|M.avium_104 -------------------------------------------------- MMAR_2810|M.marinum_M ---------------------MTDLIVRKMRFAFADHYVPFLWNEKNPAF MAB_4764c|M.abscessus_ATCC_199 ---------------------MTELIVRKLRFAFADHHVPFLWNESNPAF MSMEG_2108|M.smegmatis_MC2_155 ---------------------MTDLIVRKMRFAFADHHVPFLWNEANPAF Mflv_3010|M.gilvum_PYR-GCK ---------------------MTELIVRKLRFAFASAPVPFVWNQANPAF Mvan_3497|M.vanbaalenii_PYR-1 ---------------------MTELIVRKLRFAFANHHVPFLWNEDNPAF TH_1630|M.thermoresistible__bu ---------------------MTELRIRRIRFDFDET-VPFNWNTANPAF Mb2799c|M.bovis_AF2122/97 AMVSVDDRATGPHSSESRAADHERLVLEPRDVEFDWTNLPFHYVPNEPMA Rv2777c|M.tuberculosis_H37Rv AMVSVDDRATGPHSSESRAADHERLVLEPRDVEFDWTNLPFHYVPNEPMA MUL_2157|M.ulcerans_Agy99 -MFTVDNRAVGPHSGESGAADHERLVLEARDVEFDWANLPFHYVPNEPLP MAV_4121|M.avium_104 -MFTVDDKATGPHDA---ALDHERIVLQARDVDFDWSALPFYYVPGEPFT : :. . * :** : :* MMAR_2810|M.marinum_M SSMANAVSFLAIAFEKMVVSMISEAKPMITDPAIAEEADAFVRQEGQHSM MAB_4764c|M.abscessus_ATCC_199 SSMANAVSFLAIAFEKMIGQMIPEAMPLIADPVIAEEADAFVRQEGQHSM MSMEG_2108|M.smegmatis_MC2_155 SSMANAVSFLAIAFEKMIGHMITEAMPHITDPEIAEEAQAFVRQEGQHSM Mflv_3010|M.gilvum_PYR-GCK SSMANAVSFLAVGFEKMIGSMIPEAMPHITDRGVAEEADAFVRQEGQHAM Mvan_3497|M.vanbaalenii_PYR-1 SAMANAVSFLAVGFEKMIGGMIPEAMPHITDPAVAEEADAFVRQEGQHSM TH_1630|M.thermoresistible__bu STYMNMVSIMAICFEKMLVAAVREAMPLITDPAVAEEADAFLRQEAQHAG Mb2799c|M.bovis_AF2122/97 THVLNVLHMLLPAGEEFFVRVFKKTLPLIKDDQLRLDVQGFIGQEAMHSQ Rv2777c|M.tuberculosis_H37Rv THVLNVLHMLLPAGEEFFVRVFKKTLPLIKDDQLRLDVQGFIGQEAMHSQ MUL_2157|M.ulcerans_Agy99 THVLNVLHLLLPAGEEFFVEVFKKTLPLIKDDQLRLDVQGFIGQEAMHSQ MAV_4121|M.avium_104 THFCNVLHLLLPAGEEFIVEAFKDTLPLIKDDQLRRDVQGFISQEAMHSQ : * : :: *::. . .: * * * : :.:.*: **. *: MMAR_2810|M.marinum_M AHRQHARGLIKSYPALKETLDEVIAAFDDLTASKP----------LKYRL MAB_4764c|M.abscessus_ATCC_199 GHRQHAKGLIKSYPGLKETLDEVIASFDDLTANKP----------LKYRL MSMEG_2108|M.smegmatis_MC2_155 AHRQHAKGLIKSYPALKETLAEVVKAFDDLTADTP----------LKYRL Mflv_3010|M.gilvum_PYR-GCK AHRQHVKGLIRSYPGLKGTLDKVIAAYDDMTANTP----------LKYRL Mvan_3497|M.vanbaalenii_PYR-1 AHRQHVKGLIKAYPGLKGTLDKVIDSYDEMTASTP----------LKYRL TH_1630|M.thermoresistible__bu AHRRHVRALIRSHPGLQQTLDAAIGAYDQLTETTS----------LRHRL Mb2799c|M.bovis_AF2122/97 AHSGVVDHFDAQGVDVTAFTNQIRWLFEKLLGESPRRSPRRQYSWLLEQV Rv2777c|M.tuberculosis_H37Rv AHSGVVDHFDAQGVDVTAFTNQIRWLFEKLLGESPRRSPRRQYSWLLEQV MUL_2157|M.ulcerans_Agy99 AHSGVLAHFEAQGVDVTPYTDQIRWLFGKLLAEKPGRNPRQRHRWLLEQV MAV_4121|M.avium_104 AHAGVLGHFAAKGIDVTPFTDQMRWLFGQLIGDRPRWSPRRRQSWLLERV .* : : : .: . * :: MMAR_2810|M.marinum_M AYTADLEATFTPAFKLMLDHDDTLFAPGDDRVASLFLWHFVEEVEHRSSA MAB_4764c|M.abscessus_ATCC_199 AYTADLEATFTPVFKLMLDHDDTLFAPGDDRVASLFLWHFVEEVEHRSSA MSMEG_2108|M.smegmatis_MC2_155 AYTADLEATFTPVFKLMLDHDDTLFAPGDDRVASLFLWHFVEEVEHRSSA Mflv_3010|M.gilvum_PYR-GCK AYTADLEATFTPVFKLMLDHDDTLFSTGDDRVASLFLWHFVEEVEHRSSA Mvan_3497|M.vanbaalenii_PYR-1 AYTADLEATFTPVFKLMLDHDDTLFATGDDRVASLFLWHFVEEVEHRSSA TH_1630|M.thermoresistible__bu AYVADLEAAFTPFFTMLLDHEAALFRPGDDRVASLFVWHFVEEIEHRSSA Mb2799c|M.bovis_AF2122/97 SFIAAIEHYTAVMGEWILNSPQLDAVGADPVMLDMLRWHGAEEVEHKAVA Rv2777c|M.tuberculosis_H37Rv SFIAAIEHYTAVMGEWILNSPQLDAVGADPVMLDMLRWHGAEEVEHKAVA MUL_2157|M.ulcerans_Agy99 SFIAAIEHYTAVLGEWILNSPQLDVVGTDPVMLDMLRWHGAEEVEHKAVA MAV_4121|M.avium_104 SMVAALEHYTAILGEWILDTPQHDALGTDPVMLDLLRWHGAEEVEHKAVA : * :* : :*: * : .:: ** .**:**:: * MMAR_2810|M.marinum_M LIIYDAVADDPWYRMRVAPSIFKHVWSVLQIACHGFNKHVPVEERKVDAL MAB_4764c|M.abscessus_ATCC_199 LIIYDAVVNDPWYRMRMAPSIFRHVWSVLRIACEGFNKHVPLEDRKVDAL MSMEG_2108|M.smegmatis_MC2_155 LIIYDAVVDDPWYRMRVAPSVFKHVWGVLRLACEGFNKHVPVSERGVDAM Mflv_3010|M.gilvum_PYR-GCK LTIYDAVVDDPWYRMRVARSIFTHVMAIIRLVSEEFNEHVPLADREVDAM Mvan_3497|M.vanbaalenii_PYR-1 LIIYDAVVDDPWYRMRVAPSIFKHVMGIIRMVSEEFNEHVPLSERKVDAM TH_1630|M.thermoresistible__bu LLIYDAVVGDKWYRMRALPRIVRHLMHVVLLITNGINEHVPPADRAIDTS Mb2799c|M.bovis_AF2122/97 FDTMKHLRAGYWRQVRAQLTVTPVMLLLWIRGVRFMYSVDPYLPPGTKPR Rv2777c|M.tuberculosis_H37Rv FDTMKHLRAGYWRQVRAQLTVTPVMLLLWIRGVRFMYSVDPYLPPGTKPR MUL_2157|M.ulcerans_Agy99 FDTMKHLRAGYWRQVRAQLAVTPVMLLLWIRGVRFMYTVDPLLAPGTKPR MAV_4121|M.avium_104 FDTMKHLRAGYWRQVRTQLLVTPALLWLFIRGVRFMYSVDPHLPPGSKPR : . : . * ::* : : : . : * .. MMAR_2810|M.marinum_M SMFGMQRQKKALMQRLPFFDVADDGPLGNAFGHLPWREQLIAMFGVVRSQ MAB_4764c|M.abscessus_ATCC_199 SMFGMQARKKSLLQRLPFVDAPNDGPIENAFRHLPAREVMVAMSGAVRSQ MSMEG_2108|M.smegmatis_MC2_155 SMFGMQARRKKLMQRLPFLAAPDDGPIANAFGHLPVRDMLVALVGVVRSQ Mflv_3010|M.gilvum_PYR-GCK STFRIHRRKKALLQRLPFVDAPYDGPFANAFSHLPLREQLVALGGVVRSQ Mvan_3497|M.vanbaalenii_PYR-1 STFRIHRRKKALLQRLPFVDAPYDGPFANAFSHLPLREQLTALSGVVRSQ TH_1630|M.thermoresistible__bu TIIPLYR----LVHRT--RKDPDMPGVRPALHPVPWRQKLLTAWRVLGSQ Mb2799c|M.bovis_AF2122/97 --------------WRDYFKAARRG-------LVPGLPRLLRVVGHY--Y Rv2777c|M.tuberculosis_H37Rv --------------WRDYFKAARRG-------LVPGLPRLLRVVGHY--Y MUL_2157|M.ulcerans_Agy99 --------------WRDYVRSARRG-------LTPGPWRLIRVVGDY--Y MAV_4121|M.avium_104 --------------WRDYFSAARRG-------LVPGPFEFLRVIGAY--Y . * : MMAR_2810|M.marinum_M IPGHNPAHENLPALADEWFKRYAAGYDVTQWYTAPVQQLARDR MAB_4764c|M.abscessus_ATCC_199 IPGHNPAHEKLPALADEWFARYEAGYEVTQWYTAGKATGVGV- MSMEG_2108|M.smegmatis_MC2_155 IPGHDPAHEKLPALADEWFARYETGYDVTQWYTAGEKADVANV Mflv_3010|M.gilvum_PYR-GCK IPGHDPAHEKLPALAQEWFDRYEAGYDVTRWYTASQESETARV Mvan_3497|M.vanbaalenii_PYR-1 IPGHDPAHEELPALAQQWFDRYEAGYDVTRWYTAT-ESESANV TH_1630|M.thermoresistible__bu TPMHNPAHAVIPAFADDWIARYDRGDDVSHGYTS--------- Mb2799c|M.bovis_AF2122/97 KPGFHPSQLGGLGAAVDYLAVSPAARASH-------------- Rv2777c|M.tuberculosis_H37Rv KPGFHPSQLGGLGAAVDYLAVSPAARASH-------------- MUL_2157|M.ulcerans_Agy99 KPGFHPSQLGGLERAVDYLAVSPAARASH-------------- MAV_4121|M.avium_104 TPGFHPSQLGGVGRAVDYLARSPAARAAH-------------- * ..*:: * ::: .