For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MWKRLSWTVVAPLLALVALVLSWGQHIGPVVGLLEAVLLAGAVLAAVHHAEVVAHRVGEPFGSLVLAVAV TVIEVALIVTLMASGGHQAATLARDTVFAAVMITTNGIAGLSLLLGSQRYGVTLFNAHGSGTALATVTTL ATLSLVLPTFTTSQPGPEFSPGQLGFAAVASLALYLLFVFTQTVRHRDFFLPVAQKGAVDDDRHADPPST RAAMTSLALLLVALVAVVGLAKMESPIIERMVVAAGFPQSFVGVIIATLVLLPETLAAGRAARQGRLQIS LNLAYGSAMASIGLTIPTIALASIWLSGPLLLGLGALQLVLLVLTVVVSALTVLPGRATRLQGELHLVVL AAYIFLAVSP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2409 | chaA | - | 100% (360) | ionic transporter integral membrane protein ChaA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1633 | chaA | 1e-167 | 86.11% (360) | ionic transporter integral membrane protein chaA |
| M. gilvum PYR-GCK | Mflv_1475 | - | 1e-06 | 24.55% (330) | major facilitator transporter |
| M. tuberculosis H37Rv | Rv1607 | chaA | 1e-167 | 86.11% (360) | ionic transporter integral membrane protein chaA |
| M. leprae Br4923 | MLBr_01267 | - | 1e-156 | 78.30% (364) | putative antiporter |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | MAV_3179 | chaA | 1e-156 | 79.67% (359) | calcium/proton exchanger |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_2104 | - | 4e-07 | 24.34% (378) | sulfate permease |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1633|M.bovis_AF2122/97 ---MLKR--VPWTVVLPSLAFVALVLTWGKQIGP--------VVGLLAAV
Rv1607|M.tuberculosis_H37Rv ---MLKR--VPWTVVLPSLAFVALVLTWGKQIGP--------VVGLLAAV
MMAR_2409|M.marinum_M ---MWKR--LSWTVVAPLLALVALVLSWGQHIGP--------VVGLLEAV
MLBr_01267|M.leprae_Br4923 ---MLKR--IAWTALVPLFALAVLALTWGREIGP--------VVTALQAA
MAV_3179|M.avium_104 MSKWLSRNVLSWTVVVPVLAVVVLALIWGERLGP--------VLVALAAL
TH_2104|M.thermoresistible__bu --VIATAKENLIRLLPSRRDYAELPRSWRRDILAGITVGVVALPLALAFG
Mflv_1475|M.gilvum_PYR-GCK -MAPLSPTAQRAPLLAAGFTTAFGAHAVAGTLGT-------TTTGTAASL
. : . . : .
Mb1633|M.bovis_AF2122/97 LLAGAVLAAVNHAEVVAARVGEPFGSLVLAVAVTTIEVALIVALMVSGGD
Rv1607|M.tuberculosis_H37Rv LLAGAVLAAVNHAEVVAARVGEPFGSLVLAVAVTTIEVALIVALMVSGGD
MMAR_2409|M.marinum_M LLAGAVLAAVHHAEVVAHRVGEPFGSLVLAVAVTVIEVALIVTLMASGGH
MLBr_01267|M.leprae_Br4923 LLTGAVLAAVHHAEVVAHRVGEPFGSLVLAAAVTVIEVALIVTLMASGEN
MAV_3179|M.avium_104 FLIGAVVAAVHHAEVVAHRIGEPFGSLVLAAAVTIIEVALIVELMASGGN
TH_2104|M.thermoresistible__bu ISSGVGAAAGLITAVVAGLVAAVFGGSHIQVSGPTGAMAVILAPIVAQHG
Mflv_1475|M.gilvum_PYR-GCK LTLGAMLAIYDGAEVILK---PLFGTLADRIGARTVLIAGLAVFAVASLS
: *. * : *: ** . :* : .:
Mb1633|M.bovis_AF2122/97 DAATLARDTVFAAVMITTNGIAGLS---------LLLGSLRYGVTLFNPH
Rv1607|M.tuberculosis_H37Rv DAATLARDTVFAAVMITTNGIAGLS---------LLLGSLRYGVTLFNPH
MMAR_2409|M.marinum_M QAATLARDTVFAAVMITTNGIAGLS---------LLLGSQRYGVTLFNAH
MLBr_01267|M.leprae_Br4923 ESWTLARDTAFAALMITTNGIAGFS---------LLLGSRRYGVTLFNAH
MAV_3179|M.avium_104 ETATLARDTAFAALMITTNGIAGLS---------LLLGSRRYGVTLFNAE
TH_2104|M.thermoresistible__bu -LTSIALVTVLAGLIVLAAGITGLGRAVTFIPWPVIEGFTLGIAAIIFLQ
Mflv_1475|M.gilvum_PYR-GCK FAVADETAWLWAARLGQGIGAAAFS-----------PAASALVARLAPAS
: *. : * :.:. . . :
Mb1633|M.bovis_AF2122/97 GSGAALATVTTLATLSLVLPTFTTSQSGPELSPGQLIFAGAASLGLYVLF
Rv1607|M.tuberculosis_H37Rv GSGAALATVTTLATLSLVLPTFTTSQSGPELSPGQLIFAGAASLGLYVLF
MMAR_2409|M.marinum_M GSGTALATVTTLATLSLVLPTFTTSQPGPEFSPGQLGFAAVASLALYLLF
MLBr_01267|M.leprae_Br4923 GSGAALATLTTLATLSLVLPTFTTSHRGNEFSPGQLAFAAVASLGLYLLF
MAV_3179|M.avium_104 GSGAALATLTTLATLSLVLPAFTTTQVGKEFSPGQLTFAAVASLLVYLLF
TH_2104|M.thermoresistible__bu QVPAAFATEAPAGQRTLVAAWHVVTHADWTAAVKTLSVVSLVALLMVVLP
Mflv_1475|M.gilvum_PYR-GCK GQGRAFGTYGSYKSVGYTLGPLIGG-AIVTFGGLQALFAVMAALAAAVAV
*:.* . . . .. .:* :
Mb1633|M.bovis_AF2122/97 LFTQTVRH-------RDFFLPVAQKG----AVEDDSHADPPSTRAALLSL
Rv1607|M.tuberculosis_H37Rv LFTQTVRH-------RDFFLPVAQKG----AVEDDSHADPPSTRAALLSL
MMAR_2409|M.marinum_M VFTQTVRH-------RDFFLPVAQKG----AVDDDRHADPPSTRAAMTSL
MLBr_01267|M.leprae_Br4923 VFTQTIRH-------RDFFLPVAQKGQKGLFEEDESHADPPSARSALISL
MAV_3179|M.avium_104 VFTQTVRH-------RDFFLPIAQKGQKSLFE-DESHADPPSTREALVSL
TH_2104|M.thermoresistible__bu RLHRSIPESLTAVVAATVIVTVFGISVATIGELPSQLPTPVLPQADMGAM
Mflv_1475|M.gilvum_PYR-GCK WAAVAVPR-----------LAVLPRT--------RQTLLDTVRRFSESSF
:: . :.: : ::
Mb1633|M.bovis_AF2122/97 GLLLVALVAVVGLAKVESPVIEEVVSAAGFP-----------QSFVGVVI
Rv1607|M.tuberculosis_H37Rv GLLLVALVAVVGLAKVESPVIEEVVSAAGFP-----------QSFVGVVI
MMAR_2409|M.marinum_M ALLLVALVAVVGLAKMESPIIERMVVAAGFP-----------QSFVGVII
MLBr_01267|M.leprae_Br4923 ALLLVALIAVVGLAELQSSAIEHLVTAVGFP-----------QPFVGVVI
MAV_3179|M.avium_104 VLLLCALVAVVGLAEEESPAVERAVTAVGFP-----------QTFVGVII
TH_2104|M.thermoresistible__bu QTLLGAALAIAALAAIESLLSARVAATMSATGPYHPDRELVGQGMASVAS
Mflv_1475|M.gilvum_PYR-GCK VTPTLALAAATAALSAGVGFLPVLGTDFGLS-----------PVVTGAVV
* * .. . . ....
Mb1633|M.bovis_AF2122/97 ATLVLLPETLA--AARAARQGR---------------LQTSLNLAYG---
Rv1607|M.tuberculosis_H37Rv ATLVLLPETLA--AARAARQGR---------------LQTSLNLAYG---
MMAR_2409|M.marinum_M ATLVLLPETLA--AGRAARQGR---------------LQISLNLAYG---
MLBr_01267|M.leprae_Br4923 ATLVLLPETLA--AVRAARRGR---------------IQTSLNLAYG---
MAV_3179|M.avium_104 AALVLLPETLA--AVRAARQGR---------------IQISLNLAYG---
TH_2104|M.thermoresistible__bu GLFGGMPATGA--IARTAVNVRSGARTRLAAIVHSLVLLAVVYLATGPVS
Mflv_1475|M.gilvum_PYR-GCK SVLALTTAVVQPLAGRAADSGR---------------ISLTSGLFTG---
. : . . *:* * : * *
Mb1633|M.bovis_AF2122/97 ----------------------------SAMASIGLTIPTIALASLWLSG
Rv1607|M.tuberculosis_H37Rv ----------------------------SAMASIGLTIPTIALASLWLSG
MMAR_2409|M.marinum_M ----------------------------SAMASIGLTIPTIALASIWLSG
MLBr_01267|M.leprae_Br4923 ----------------------------SAMASIGLTIPAIALASIWLTG
MAV_3179|M.avium_104 ----------------------------SAMASIGLTIPAIALASIWLKG
TH_2104|M.thermoresistible__bu AIPLSALAGVLMVTSFRMVSLHTARRILRSTRSDALTFVLTALVTITFDL
Mflv_1475|M.gilvum_PYR-GCK ----------------------------VVVTAAGVAAAALPGLVGLLGG
: .:: . :
Mb1633|M.bovis_AF2122/97 PLQLGLGAIQLVLLVLTVVVS----VLTVVPGRATRLQGEVHLVLLAAYL
Rv1607|M.tuberculosis_H37Rv PLQLGLGAIQLVLLVLTVVVS----VLTVVPGRATRLQGEVHLVLLAAYL
MMAR_2409|M.marinum_M PLLLGLGALQLVLLVLTVVVS----ALTVLPGRATRLQGELHLVVLAAYI
MLBr_01267|M.leprae_Br4923 PLILGLGATQLVLLALTVVIS----VLTVVPGRATRLQGEVHLVLLAAFV
MAV_3179|M.avium_104 PLVLGLGAIQLVLLALTVVIS----VLTVVPGRATRLQGEVHLVLLAAYV
TH_2104|M.thermoresistible__bu IEAVQIGVLVAAFFALRNVARRSGVTREELPGEPQPGDERIALLRLEGSM
Mflv_1475|M.gilvum_PYR-GCK AVVIGVGCGLITPLAFTMLAR----STPEERLGQTMGAAEIGRECGDAAG
: :* . :.: : .: .
Mb1633|M.bovis_AF2122/97 FLAVVP--------------------------------------------
Rv1607|M.tuberculosis_H37Rv FLAVVP--------------------------------------------
MMAR_2409|M.marinum_M FLAVSP--------------------------------------------
MLBr_01267|M.leprae_Br4923 FLAIIP--------------------------------------------
MAV_3179|M.avium_104 FLAVSP--------------------------------------------
TH_2104|M.thermoresistible__bu FFGVAERMSSTISEIEADDISVVIIRLSQLGTLDATGANSLAQIATELER
Mflv_1475|M.gilvum_PYR-GCK PLVVAAIAAASTVPFGFLGLAAVVAASGVGVRRGRGRVGGVG--------
: :
Mb1633|M.bovis_AF2122/97 --------------------------------------------------
Rv1607|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2409|M.marinum_M --------------------------------------------------
MLBr_01267|M.leprae_Br4923 --------------------------------------------------
MAV_3179|M.avium_104 --------------------------------------------------
TH_2104|M.thermoresistible__bu RGITVIIKGVQPEHSKLLSNVGVFESLRHEKHLIDSLEDAIEHARSHVAR
Mflv_1475|M.gilvum_PYR-GCK --------------------------------------------------
Mb1633|M.bovis_AF2122/97 --------
Rv1607|M.tuberculosis_H37Rv --------
MMAR_2409|M.marinum_M --------
MLBr_01267|M.leprae_Br4923 --------
MAV_3179|M.avium_104 --------
TH_2104|M.thermoresistible__bu QQTARTTS
Mflv_1475|M.gilvum_PYR-GCK --------