For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPGTAGIANLANVLTGLRFVLVPIFLYLLFYDGGHQTTFRIAAWAVFAVASITDRFDGLLARNYGMATEF GAFVDPIADKALIGAALIGLSMLNDLPWWVTVLILSRELGVTMLRLAVIRRGVIPASWGGKLKTVVQAVA IGLFVLPLSGPLHMAAVVVMAAAIVLTVVTGIDYVASTVREIRAGKRAS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1969 | pgsA3 | - | 100% (189) | PGP synthase PgsA3 |
M. marinum M | MMAR_2699 | pgsA2 | 4e-11 | 26.15% (130) | CDP-diacylglycerol--glycerol-3-phosphate 3- |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2767c | pgsA3 | 1e-81 | 80.77% (182) | CDP-diacylglycerol--glycerol-3-phosphate |
M. gilvum PYR-GCK | Mflv_3989 | - | 1e-63 | 66.48% (179) | CDP-diacylglycerol--glycerol-3-phosphate |
M. tuberculosis H37Rv | Rv2746c | pgsA3 | 1e-81 | 80.77% (182) | CDP-diacylglycerol--glycerol-3-phosphate |
M. leprae Br4923 | MLBr_00979 | - | 2e-74 | 76.67% (180) | CDP-diacylglycerol--glycerol-3-phosphate |
M. abscessus ATCC 19977 | MAB_3071c | - | 8e-59 | 59.77% (174) | PGP synthase PgsA3 (phosphatidylglycerophosphate synthase) |
M. avium 104 | MAV_3637 | pgsA | 1e-73 | 75.54% (184) | CDP-diacylglycerol--glycerol-3-phosphate |
M. smegmatis MC2 155 | MSMEG_2692 | pgsA | 9e-66 | 68.68% (182) | CDP-diacylglycerol--glycerol-3-phosphate |
M. thermoresistible (build 8) | TH_0577 | pgsA3 | 8e-65 | 68.33% (180) | PROBABLE PGP SYNTHASE PGSA3 |
M. ulcerans Agy99 | MUL_3388 | pgsA3 | 1e-102 | 99.47% (189) | PGP synthase PgsA3 |
M. vanbaalenii PYR-1 | Mvan_2395 | - | 8e-66 | 69.27% (179) | CDP-diacylglycerol--glycerol-3-phosphate |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3989|M.gilvum_PYR-GCK ----------------MCNQYSVAVPGQPHTDPVVPRARVANIANVLTGI Mvan_2395|M.vanbaalenii_PYR-1 ----------------------MAVPGQPHTDPVVPRARVANLANLLTGI MSMEG_2692|M.smegmatis_MC2_155 ------------------------MPGQPSTDPVVPRARVANLANVLTGI TH_0577|M.thermoresistible__bu ---------------------------------------VANLANALTGV MMAR_1969|M.marinum_M ---------------------------------MPGTAGIANLANVLTGL MUL_3388|M.ulcerans_Agy99 MTFGHEKTVSTSAAGRLVNRYSVAVSGQPQTGQVPGTVGIANLANVLTGL Mb2767c|M.bovis_AF2122/97 --------MSRS------TRYSVAVSAQPETGQIAGRARIANLANILTLL Rv2746c|M.tuberculosis_H37Rv --------MSRS------TRYSVAVSAQPETGQIAGRARIANLANILTLL MLBr_00979|M.leprae_Br4923 ---------------------------------MVDCVRIANLANILTGL MAV_3637|M.avium_104 ---------------------------------MVGRANIANLANTLTLL MAB_3071c|M.abscessus_ATCC_199 --------------------MPMPPETQPDSAASAAPVPVLNIANILTVL : *:** ** : Mflv_3989|M.gilvum_PYR-GCK RMALVPVFLVALFVGDGHETFWRLTAFTIFLVAVITDRLDGALARSYGMV Mvan_2395|M.vanbaalenii_PYR-1 RMALVPVFLFALFAGDGQETSWRITAFVVFAVAVITDRFDGALARSYGMV MSMEG_2692|M.smegmatis_MC2_155 RMALVPVFLVFLFTDGGHEFFWRMAAFTVFAVAVITDRFDGALARSYGMV TH_0577|M.thermoresistible__bu RLLLVPVFLILLFVGDGHETSWRIGAFAVFAVAVITDRFDGALARSYGMV MMAR_1969|M.marinum_M RFVLVPIFLYLLFYDGGHQTTFRIAAWAVFAVASITDRFDGLLARNYGMA MUL_3388|M.ulcerans_Agy99 RFVLVPIFLYLLFYDGGHQTTFRIAAWAVFAVASITDRFDGLLARNYGMA Mb2767c|M.bovis_AF2122/97 RLVMVPVFLLALFYGGGHHSAARVVAWAIFATACITDRFDGLLARNYGMA Rv2746c|M.tuberculosis_H37Rv RLVMVPVFLLALFYGGGHHSAARVVAWAIFATACITDRFDGLLARNYGMA MLBr_00979|M.leprae_Br4923 RLMLVPVFLVALFAGNGHEIVGRIAAFVIFTVACITDRLDGLLARRYGMA MAV_3637|M.avium_104 RLVLVPVFLLALFAGDGHETGFRILAFLIFAFACITDRLDGLLARNYGMA MAB_3071c|M.abscessus_ATCC_199 RIVLVPVFVVVLFTEGGHQSSWRIAAFGVFALAIATDRYDGILARRYGLI *: :**:*: ** .*:. *: *: :* * *** ** *** **: Mflv_3989|M.gilvum_PYR-GCK TEFGTLADPIADKMLIGSALVGLSILGDLPWWVTVVILVREVAVTVLRLV Mvan_2395|M.vanbaalenii_PYR-1 TEFGTLADPIADKALIGSALVGLSVLGDLPWWVTVVILVRELGVTLLRLV MSMEG_2692|M.smegmatis_MC2_155 TEFGALADPIADKALIGAALIGLSMLGDLPWWVTAVVLAREIGITLMRLA TH_0577|M.thermoresistible__bu TEFGTLADPIADKALIGAALIGLSLLGDLPWWVTAVILVREIGITALRFA MMAR_1969|M.marinum_M TEFGAFVDPIADKALIGAALIGLSMLNDLPWWVTVLILSRELGVTMLRLA MUL_3388|M.ulcerans_Agy99 TEFGAFVDPIADKALIGAALIGLSMLNDLPWWVTVLILSRELGVTMLRLA Mb2767c|M.bovis_AF2122/97 TEFGAFVDPIADKTLIGSALIGLSMLGDLPWWVTVLILTRELGVTVLRLA Rv2746c|M.tuberculosis_H37Rv TEFGAFVDPIADKTLIGSALIGLSMLGDLPWWVTVLILTRELGVTVLRLA MLBr_00979|M.leprae_Br4923 TEFGAFVDPIADKTLIGAALIGLSMLGDLPWWVTVLIMTRELGVTLLRLA MAV_3637|M.avium_104 TEFGAFVDPIADKTLVGSALIGLSMLGELPWWITVLILAREFGVTVLRLA MAB_3071c|M.abscessus_ATCC_199 TPFGQLADPIADKALICAALVGLSLLGDLSWWVTAVILVREIGITVLRFS * ** :.****** *: :**:***:*.:*.**:*.::: **..:* :*: Mflv_3989|M.gilvum_PYR-GCK VLRRGVIPASRGGKIKTLVQAVAIGLFVMPLS---GAWLTGAWVIMAAAG Mvan_2395|M.vanbaalenii_PYR-1 VLRRGVIPASRGGKLKTLVQAVAIGLFVLPLS---DGWLTGAWVIMLAAV MSMEG_2692|M.smegmatis_MC2_155 VLRHGVIPASRGGKLKTTVQAVAIGLFVMPLYAWSPVWTTVAWAIMWAAV TH_0577|M.thermoresistible__bu VLRHGVIPASRGGKLKTLAQAVAIGLFVLPLANWAPVWSTVAWGIMAVAV MMAR_1969|M.marinum_M VIRRGVIPASWGGKLKTVVQAVAIGLFVLPLSG---PLHMAAVVVMAAAI MUL_3388|M.ulcerans_Agy99 VIRRGVIPASWGGKLKTVVQAVAIGLFVLPLSG---PLHMAAVVVMAAAI Mb2767c|M.bovis_AF2122/97 VIRRGVIPASWGGKLKTFVQAVAIGLFVLPLSG---PLHVAAVVVMAAAI Rv2746c|M.tuberculosis_H37Rv VIRRGVIPASWGGKLKTFVQAVAIGLFVLPLSG---PLHVAAVVVMAAAI MLBr_00979|M.leprae_Br4923 VIHRGVIPASWGGKLKTVVQAVAIGLFLLPLTQLSVPFHVGAAVVMAVAV MAV_3637|M.avium_104 VIRRGVIPASWGGKLKTVVQVFAIGLFVLPWAGTPGPFRVGAAVVMGAAI MAB_3071c|M.abscessus_ATCC_199 VLRHGVIPANRGGKLKTLVQSLAIAGYLLPLTG---HWHTAALILMGLAV *:::*****. ***:** .* .**. :::* * :* * Mflv_3989|M.gilvum_PYR-GCK VLTVLTGVDYFVSAVRDWRRQSPGR- Mvan_2395|M.vanbaalenii_PYR-1 ALTVTTGVDYFVSAVRDWRGRSAGQ- MSMEG_2692|M.smegmatis_MC2_155 VLTVLTGADYVVSAIRDSRGRPADN- TH_0577|M.thermoresistible__bu VLTVFTGVDYVVSAVRDSRGRSAGH- MMAR_1969|M.marinum_M VLTVVTGIDYVASTVREIRAGKRAS- MUL_3388|M.ulcerans_Agy99 VLTVVTGIDYVASTVREIRAGKRAS- Mb2767c|M.bovis_AF2122/97 LLTVITGVDYVARALRDIGGIRQTAS Rv2746c|M.tuberculosis_H37Rv LLTVITGVDYVARALRDIGGIRQTAS MLBr_00979|M.leprae_Br4923 VLTVVTGVDYVAGTIRAVRGVHQTAS MAV_3637|M.avium_104 VLTVITGIDYVVSTVREVR---RTAA MAB_3071c|M.abscessus_ATCC_199 ALTVITGIDYLVQALRPRPKTP---- *** ** **.. ::*