For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPNNGSNRVFVIGVGMTKFEKPGRREGWDYPDMARESGTNALNDAGIEYREVEHAYVGYVYGESTSGQRA VYELGMTGIPVVNVNNNCSTGSTALFLAAQAIRGGLADCTVALGFEKMKPGSLSSSYDDRTQPMDKHVKA LAQIAEFAFPVAPWMFGAAGREHMQQYGSTAEHFAKIGFKNHKHSVNNPFAQFQEAYTLDDILASRMIYE PLTKLQCSPTSDGSGAAILASESFVDSHGLAGRAVEIVGQAMTTDFASTFDGSAKNLIGYDMNVQAAQRV YQQSGLGPEDFQVIELHDCFSANELLLYEALGLCGQGEAPKLIDNGDTTYGGRWVVNPSGGLISKGHPLG ATGLAQCCELTWQLRGTADRRQVDDVTAALQHNIGLGGAAVVTAYQRAER
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1918 | ltp1 | - | 100% (400) | lipid-transfer protein Ltp1 |
M. marinum M | MMAR_0142 | ltp1_1 | 2e-62 | 35.71% (406) | lipid-transfer protein Ltp1_1 |
M. marinum M | MMAR_2430 | - | 1e-50 | 34.14% (413) | nonspecific lipid-transfer protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2813c | ltp1 | 0.0 | 84.54% (401) | lipid-transfer protein |
M. gilvum PYR-GCK | Mflv_2025 | - | 0.0 | 82.99% (394) | lipid-transfer protein |
M. tuberculosis H37Rv | Rv2790c | ltp1 | 0.0 | 84.54% (401) | lipid-transfer protein |
M. leprae Br4923 | MLBr_01158 | fadA4 | 1e-08 | 23.25% (400) | acetyl-CoA acetyltransferase |
M. abscessus ATCC 19977 | MAB_2951c | - | 0.0 | 83.25% (400) | lipid-transfer protein |
M. avium 104 | MAV_3681 | - | 0.0 | 87.59% (395) | lipid-transfer protein |
M. smegmatis MC2 155 | MSMEG_3844 | - | 5e-51 | 33.41% (413) | lipid-transfer protein |
M. thermoresistible (build 8) | TH_2429 | - | 2e-53 | 34.06% (411) | PUTATIVE lipid-transfer protein |
M. ulcerans Agy99 | MUL_2143 | ltp1 | 0.0 | 99.25% (400) | lipid-transfer protein |
M. vanbaalenii PYR-1 | Mvan_2338 | - | 0.0 | 85.79% (394) | lipid-transfer protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1918|M.marinum_M -----MPNNGSNRVFVIGVGMTKFEKPGRRE-----GWDYPDMARESGTN MUL_2143|M.ulcerans_Agy99 -----MPNNGSNRVFVIGVGMTKFEKPGRRE-----GWDYPDMARESGTN MAB_2951c|M.abscessus_ATCC_199 -----MAN----RVYVVGVGMTKFEKPGRRLNDDGSAWDYPDMARESGTK Mvan_2338|M.vanbaalenii_PYR-1 -----MPN----KVFVIGVGMTKFEKPGSRE-----GWDYPDMAREAGTK Mb2813c|M.bovis_AF2122/97 MPNQGSSN----KVYVIGVGMTKFEKPGRRE-----GWDYPDMARESGTK Rv2790c|M.tuberculosis_H37Rv MPNQGSSN----KVYVIGVGMTKFEKPGRRE-----GWDYPDMARESGTK Mflv_2025|M.gilvum_PYR-GCK ------MN----RVFVVGVGMTKFEKPGRME-----NWDYPDMARESGTK MAV_3681|M.avium_104 -----MSN----KVYVVGVGMTKFEKPGRRE-----GWDYPGMARESGTN MSMEG_3844|M.smegmatis_MC2_155 ---MSAPE----PVYILGAGMHPWGK---------WGRDFTEYGVVAARA TH_2429|M.thermoresistible__bu ----MSPE----PVYILGAGMHPWGK---------WGRDFTEYGVAAARA MLBr_01158|M.leprae_Br4923 -----MTT----SVIVTGARTPIGKLMGSLK-----DFSASDLGAITIAA * : *. . . . : MMAR_1918|M.marinum_M ALNDAGIEYREVEHAY----VGYVYGESTSGQRAVYELGMTGIPVVNVNN MUL_2143|M.ulcerans_Agy99 ALNDAGIEYREVEHAY----VGYVYGESTSGQRAVYELGMTGIPVVNVNN MAB_2951c|M.abscessus_ATCC_199 ALADAGIGYDLVEQAY----VGYVYGESTSGQRAVYELGMSGIPVVNVNN Mvan_2338|M.vanbaalenii_PYR-1 ALDDAGVDYREVEEAY----VGYVYGESTSGQRAVYELGMTGVPVVNVNN Mb2813c|M.bovis_AF2122/97 ALRDAGIDYREVEQGY----VGYVYGESTSGQRALYELGMTGIPIVNVNN Rv2790c|M.tuberculosis_H37Rv ALRDAGIDYREVEQGY----VGYVYGESTSGQRALYELGMTGIPIVNVNN Mflv_2025|M.gilvum_PYR-GCK ALEDAGIAYSEIQQGY----VGYCSGDSTSGQRALYELGMTGIPIVNVNN MAV_3681|M.avium_104 ALADAGIDYREVQQGY----VGYVAGDSTSGQRALYELGMTGIPIVNVNN MSMEG_3844|M.smegmatis_MC2_155 ALAEAGLDWRQIQLVAGADTIRNGYPGFVAGATFAQKLGWNGVPVTSSYA TH_2429|M.thermoresistible__bu ALAEAGLDWRQIQFVAGADTIRNGYPGFVAGSTFAQKLGWNGVPVSSSYA MLBr_01158|M.leprae_Br4923 ALKKANVAPSIVQYVIIGQVLTAGAGQMPARQAAVAAGIGWDVPALTINK ** .*.: :: : : .:* . MMAR_1918|M.marinum_M NCSTGSTALFLAAQAIRGGLADCTVALGFEKMKPGSLSSSYDDRTQPMDK MUL_2143|M.ulcerans_Agy99 NCSTGSTALFLAAQAIRGGLADCTVALGFEKMKPGSLSSSYDDRTQPMDK MAB_2951c|M.abscessus_ATCC_199 NCSTGSTALYLAAQSIRGGLADCALALGFEKMNPGSLGAMYDDRAQPMEK Mvan_2338|M.vanbaalenii_PYR-1 NCSTGSTALYLAARAVRGGLADCTLALGFEKMQPGSLGSTYDDRAQPMEK Mb2813c|M.bovis_AF2122/97 NCSTGSTALYLGAQAIRGGLADCVLALGFEKMQPGALGGGADDRESPLGR Rv2790c|M.tuberculosis_H37Rv NCSTGSTALYLGAQAIRGGLADCVLALGFEKMQPGALGGGADDRESPLGR Mflv_2025|M.gilvum_PYR-GCK NCSTGSTALYLAAQSIRGGLADCVLALGFEKMQPGSLGGGAQDRESPLGR MAV_3681|M.avium_104 NCSTGSTALFLAAQAIRGGLVDCAIALGFEKMQPGSLGGGAQDRESPMGR MSMEG_3844|M.smegmatis_MC2_155 ACASGSQALQSARAQILAGFCDVALVVGADTTPKGFFAPVGGERKNDPDW TH_2429|M.thermoresistible__bu ACASGSQALQSARAQILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDW MLBr_01158|M.leprae_Br4923 MCLSGLDAIALADQLIRAGEFDVVVAGGQESMTKAPHLLMD----SRSGY * :* *: . : .* * .:. * :. . . MMAR_1918|M.marinum_M HVKALAQIAEFAFPVAPWMFGAAGREHMQQYGSTAEHFAKIG-FKNHKHS MUL_2143|M.ulcerans_Agy99 HVKALAQIAEFAFPVAPWMFGAAGREHMQQYGSTAEHFAKIG-FKNHKHS MAB_2951c|M.abscessus_ATCC_199 HILALAEISEVLFPPASWMFGAAGREHMQQYGSTAEHFAKIG-HKNHKHS Mvan_2338|M.vanbaalenii_PYR-1 HFLALAEISEVLFPPAPWMFGAAGREHMKEYGSTAEHFAKIG-YKNHKHS Mb2813c|M.bovis_AF2122/97 HVKALAEIDEFGFPVAPWMFGAAGREHMKKYGTTAEHFAKIG-YKNHKHS Rv2790c|M.tuberculosis_H37Rv HVKALAEIDEFGFPVAPWMFGAAGREHMKKYGTTAEHFAKIG-YKNHKHS Mflv_2025|M.gilvum_PYR-GCK HVKALSEIDEFAFPVAPWMFGAAGREHMKKYGTTAEHFAKIG-FKNHKHS MAV_3681|M.avium_104 HVKAMAEIDEFAMPVAPWMFGAAGREHMRQYGSTAEHFAKIG-YKNHKHS MSMEG_3844|M.smegmatis_MC2_155 QRFHLIGATNTVY------FALLARRRMDLYGATLEDFAQVK-VKNARHG TH_2429|M.thermoresistible__bu QRFHLIGATNTVY------FALLARRRMDLYGATAEDFAAVK-VKNARHG MLBr_01158|M.leprae_Br4923 KYGDVTIVDHLAYDGLHDVFTNQPMGALTEQRNDVEKFTRQEQDEFAARS : : . * : *.*: : :. MMAR_1918|M.marinum_M VNNPFAQFQEAYTLDDILASRMIYEPLTKLQCSPTS---DGSGAAILASE MUL_2143|M.ulcerans_Agy99 VNNPFAQFQEAYTLDDILASRMIYEPLTKLRCSPTS---DGSGAAILASE MAB_2951c|M.abscessus_ATCC_199 VNNPYAQFQDEYTLDDILNSRMIYDPLTKLQCSPTS---DGSGAAILASE Mvan_2338|M.vanbaalenii_PYR-1 VNNPYAQFQDEYTLDDILDSRMIYDPLTKLQCSPTS---DGSGAAILASE Mb2813c|M.bovis_AF2122/97 VNNPYAQFQDEYTLDDILASKMISDPLTKLQCSPTS---DGSAAVVLASE Rv2790c|M.tuberculosis_H37Rv VNNPYAQFQDEYTLDDILASKMISDPLTKLQCSPTS---DGSAAVVLASE Mflv_2025|M.gilvum_PYR-GCK VNNPYAQFQDEYSLDDILAAKMISDPLTKLQCSPTS---DGSAAVVLASE MAV_3681|M.avium_104 VNNPFAQFQESYTLEDILAARMISDPLTKLQCSPTS---DGSGAAILASE MSMEG_3844|M.smegmatis_MC2_155 LNNPNARYRKEASVEDVLASPVVSDPLRLLDICATS---DGAAALVVASK TH_2429|M.thermoresistible__bu LHNPYARYRKETSIEDVLASPVVSDPLRLLDICATS---DGAAALIVASR MLBr_01158|M.leprae_Br4923 HQKAAAAWKDGVFADEVVPVSIPQSKGDSLQFTEDEGIRANTSAESLAGL ::. * ::. :::: : . * . .:.* :*. MMAR_1918|M.marinum_M SFVDSHGLAGRAVEIVG--QAMTTDFASTFDGSAKNLIGYDMNVQAAQRV MUL_2143|M.ulcerans_Agy99 SFVDSHGLAGRAVEIVG--QAMTTDFASTFDGSAKNLIGYDMNVQAARRV MAB_2951c|M.abscessus_ATCC_199 AFVDRHGLASQAVEIVG--QAMTTDFQNSFDGTCKAIIGYHMNVSAARQV Mvan_2338|M.vanbaalenii_PYR-1 DFVDRHGLADRAVEIVG--QAMTSDFSDSFDGTCKALIGYHMNVAAAQSV Mb2813c|M.bovis_AF2122/97 DYLANHNLAGRAVEIVG--QAMTTDFASTFDGSARNIIGYDMTVQAAQRV Rv2790c|M.tuberculosis_H37Rv DYLANHNLAGRAVEIVG--QAMTTDFASTFDGSARNIIGYDMTVQAAQRV Mflv_2025|M.gilvum_PYR-GCK DYVARHDLAGQAVEIVG--QAMTTDFASTFDGSAANIIGHDMNVKAAQQV MAV_3681|M.avium_104 AFVDKHGLAGQAVEIVG--QAMTTDFASTFDGSAKNLIGYDMNVQAAQQV MSMEG_3844|M.smegmatis_MC2_155 SFVEKHLGSVEGVPSVRAISLQSPQYPQHLPELPDIATDSTAVVKAPERV TH_2429|M.thermoresistible__bu SFAEKHLGSVQGVPSVRAVSTVTPRYPQHLPELPDIATDSTAVVDAPERV MLBr_01158|M.leprae_Br4923 KPAFRCGGTITPGSASQISDGAATVVVMNKEKAQQLGLTWLVEIGAHGVV : . :. : * * MMAR_1918|M.marinum_M YQ---------QSGLGPEDFQVIELHDCFSANELLLYEALGLCGQGEAPK MUL_2143|M.ulcerans_Agy99 YQ---------QSGLGPEDFQVIELHDCFSANELLLYEALGLCGQGEAPK MAB_2951c|M.abscessus_ATCC_199 YD---------QSGLGAEDFQVIELHDCFSANEFLLYEALGLCGEGEAGK Mvan_2338|M.vanbaalenii_PYR-1 YE---------QAGLGPEEFQVIELHDCFSANELLLYEALGLCGEGEAPK Mb2813c|M.bovis_AF2122/97 YQ---------QSGLGPKDFGVIELHDCFSANELLLYEALGLCGPGEAPE Rv2790c|M.tuberculosis_H37Rv YQ---------QSGLGPKDFGVIELHDCFSANELLLYEALGLCGPGEAPE Mflv_2025|M.gilvum_PYR-GCK YS---------QSGLGPEDFQVIELHDCFSANELLLYEALGLCGPGEAPR MAV_3681|M.avium_104 YD---------QSGLGPQDFQVIELHDCFSANELLLYEALGLCGPGEAPK MSMEG_3844|M.smegmatis_MC2_155 FKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCEKGEAEQ TH_2429|M.thermoresistible__bu FKDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCAKGEAEQ MLBr_01158|M.leprae_Br4923 AG--------PDSTLQSQPANAIKKAVDREGISVEQLDVVEINEAFAAVA :: : .: : . .. : : : * MMAR_1918|M.marinum_M LIDNGDTTYGGRWVVNPSGGLISKGHPLGATGLAQCCELTWQLRGTADRR MUL_2143|M.ulcerans_Agy99 LIDNGDTTYGGRWVVNPSGGLISKGHPLGATGLAQCCELTWQLRGTADRR MAB_2951c|M.abscessus_ATCC_199 LIDNGDTTYGGRWVVNPSGGLISKGHPLGATGLAQCAELTWQLRGAADKR Mvan_2338|M.vanbaalenii_PYR-1 LIDAGDTTYGGRWVVNPSGGLISKGHPLGATGLAQCAELTWQLRGDADKR Mb2813c|M.bovis_AF2122/97 LIDDNQTTYGGRWVVNPSGGLISKGHPLGATGLAQCAELTWQLRGTAEAR Rv2790c|M.tuberculosis_H37Rv LIDDNQTTYGGRWVVNPSGGLISKGHPLGATGLAQCAELTWQLRGTAEAR Mflv_2025|M.gilvum_PYR-GCK LIDDNDTTYGGRWVVNPSGGLISKGHPLGATGLAQCSELTWQLRGTADKR MAV_3681|M.avium_104 LIDNGDTTYGGRWVVNPSGGLISKGHPLGATGLAQCAELTWQLRGTADKR MSMEG_3844|M.smegmatis_MC2_155 LLRSGATTIGGRIPVNASGGLACFGEAIPAQAIAQVCELTWQLKGQATGR TH_2429|M.thermoresistible__bu LLRSGATALGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGR MLBr_01158|M.leprae_Br4923 LASARELGIAP-ELVNVNGGAIAVGHPLGMSGARITLHVALELARRGSG- * . ** .** . *..: . .:: :* . MMAR_1918|M.marinum_M QVDDVTAALQHNIGLGGAAVVTAYQRAER MUL_2143|M.ulcerans_Agy99 QVDNVTAALQHNIGLGGAAVVTAYQRAER MAB_2951c|M.abscessus_ATCC_199 QVDRVDAALQHNIGLGGAAVITAYQRAER Mvan_2338|M.vanbaalenii_PYR-1 QVNGVTAALQHNIGLGGAAVVTAYQRAER Mb2813c|M.bovis_AF2122/97 QVDNVTAALQHNIGLGGAAVVTAYQRAER Rv2790c|M.tuberculosis_H37Rv QVDNVTAALQHNIGLGGAAVVTAYQRAER Mflv_2025|M.gilvum_PYR-GCK QVDGVTAALQHNIGLGGAAVVTAYQRAER MAV_3681|M.avium_104 QVENVSAALQHNIGLGGAAVVTAYQRAER MSMEG_3844|M.smegmatis_MC2_155 QVEGAKVGITANQGLFGHGSSVIVAR--- TH_2429|M.thermoresistible__bu QVENAKVGITANQGLFGHGSSVIVAR--- MLBr_01158|M.leprae_Br4923 ------YGVAALCGAGGQGDALILRAV-- .: * * .