For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_1212 (-)

annotation: hypothetical protein MMAR_1212
coordinates: 1472935 - 1474461
length: 508

IDTTAPHSPVHSPSHGAGPANIKPDYHPRLTNDDLAPLREQTWGTYNIFAFWMSDVHSVGGYVTAGSLFA
LGLASWQVLVSLVIAITIVYFLCNLVARPSQATGVPYPVICRTAFGVLGANIPAIIRGLIAVAWYGIQTY
LASAALDVVMIKLFPGLARYAVVEDYGFLGLPALGWASYLILWVLQACVFWRGMEAIRKFIDFCGPAVYV
VMFALSGYLISKAGWAAIDLNLGDVRYSGWDAIPVMLGAIALVVSYFSGPMLNFGDFSRYGRSFGAVRKG
NFLGLPLNFLLFSLLVVVTASLTVPVFGELITDPVQTVARIDSTFAIILGASTFTIATIGINIVANFISP
AFDFSNVNPQRISWRTGGMIAAVGSALITPWNLYNHPDVIHYTLETLGAFIGPLFGVLIADYYLVRKQHV
VVDDLFSLSHDGTYWYRKGYNPAAVIATAVSAAIAMVPVLASDVYGMYTAAEYSWFIGCGVALVVYYLLA
TRGRLAIAPPYHPVGAG*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_1212--100% (508)hypothetical protein MMAR_1212

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_3170-1e-10341.76% (467) permease for cytosine/purines, uracil, thiamine, allantoin
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2936-1e-17864.92% (476) putative cytosine/purine/uracil/thiamine/ allantoin permease
M. avium 104-----
M. smegmatis MC2 155MSMEG_5730-0.079.18% (490) permease for cytosine/purines, uracil, thiamine, allantoin
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_2680-0.099.14% (465) hypothetical protein MUL_2680
M. vanbaalenii PYR-1Mvan_0932-0.081.22% (490) permease for cytosine/purines, uracil, thiamine, allantoin

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1212|M.marinum_M               --------------MIDTT-APHSP-----------------VHSPSHGA
MUL_2680|M.ulcerans_Agy99           --------------MIDTT-APHSP-----------------VHSPSHGA
MSMEG_5730|M.smegmatis_MC2_155      --------------MTETA-VPNAGGGPAGPDGSFPVAAGDLVEAAGHPI
Mvan_0932|M.vanbaalenii_PYR-1       --------------MTDTAPAPPSRKLPPG----AVVGADDLVEAAGHPV
MAB_2936|M.abscessus_ATCC_1997      --------------MSGVLTADAVAP-----------------TGGHSAA
Mflv_3170|M.gilvum_PYR-GCK          MSVCALLSKLVEYYFRKVEFSGDARVGAPTVTG-VSMSTESTGLIGDSSR
                                                  :  .                                

MMAR_1212|M.marinum_M               GPANIKPDYHPRLTNDDLAPLREQ--TWGTYNIFAFWMSDVHSVGGYVTA
MUL_2680|M.ulcerans_Agy99           GPANIKPDYHPRLTNDDLAPLREQ--TWGTYNIFAFWMSDVHSVGGYVTA
MSMEG_5730|M.smegmatis_MC2_155      GSGAIKPGYDPRLTNEDLAPLRQQ--KWGSYNIFAFWMSDVHSVGGYVTA
Mvan_0932|M.vanbaalenii_PYR-1       GAGRIEPGYDPRLTNEDLAPLRKQ--TWTSYNIFAFWMSDVHSVGGYVTA
MAB_2936|M.abscessus_ATCC_1997      GDSVIKPGYDPALTNGDLAPLRTQ--TWTSYNFFAFWMSDVHSVGGYVFA
Mflv_3170|M.gilvum_PYR-GCK          NDHTALAGVSPHLYNPDLAPTKRAGRRWGSYNIFTLWANDVHSLGNYSFA
                                    .     ..  * * * **** :     * :**:*::* .****:*.*  *

MMAR_1212|M.marinum_M               GSLFALGLASWQVLVSLVIAITIVYFLCNLVARPSQATGVPYPVICRTAF
MUL_2680|M.ulcerans_Agy99           GSLFALGLASWQVLVSLVIAITIVYFLCNLVARPSQATGVPYPVICRTAF
MSMEG_5730|M.smegmatis_MC2_155      GSLFALGLASWQVLVALLIGISIVNVFCNLVAKPSQQTGVPYPVICRTVF
Mvan_0932|M.vanbaalenii_PYR-1       GSLFALGLASWQVLVALLAGITIVYYLCNLVAKPSQATGVPYPVICRTVF
MAB_2936|M.abscessus_ATCC_1997      GSLFALGISASQVLLALLVGIAAVYWLCNLVARPSQQTGVPYPVTARIAF
Mflv_3170|M.gilvum_PYR-GCK          IGLFALGLGGWQILLALGLGGVFLFLLLNLSGFMGEKTGVPFPVMSRIAF
                                     .*****:.. *:*::*  .   :  : ** .  .: ****:** .* .*

MMAR_1212|M.marinum_M               GVLGANIPAIIRGLIAVAWYGIQTYLASAALDVVMIKLFPGLARYAVVED
MUL_2680|M.ulcerans_Agy99           GVLGANIPAIIRGLIAVAWYGIQTYLASAALDVVMIKLFPGLARYAVVED
MSMEG_5730|M.smegmatis_MC2_155      GVLGANIPAIIRGLIAVAWYGIQTFLASAALDIVLVKLFPALAPYAVVDD
Mvan_0932|M.vanbaalenii_PYR-1       GVLGANIPAIIRGLIAVAWYGIQTFLASAALDIVLIKLFPALAPYAVVED
MAB_2936|M.abscessus_ATCC_1997      GVRGANLPAVIRGLIAVAWYGIQTYLASTAFVLLAVKFQPSLGRYGNAGE
Mflv_3170|M.gilvum_PYR-GCK          GIRGAQIPALIRGAVAIAWFGIQTYLASVVLRIMIIALAPSAES---LDS
                                    *: **::**:*** :*:**:****:***..: :: : : *.        .

MMAR_1212|M.marinum_M               YGFLGLPALGWASYLILWVLQACVFWRGMEAIRKFIDFCGPAVYVVMFAL
MUL_2680|M.ulcerans_Agy99           YGFLGLPALGWASYLILWVLQACVFWRGMEAIRKFIDFCGPAVYVVIFAL
MSMEG_5730|M.smegmatis_MC2_155      YGFAGLSLLGWGSFLLLWVLQACVFWRGMESIRKFIDFCGPAVYVVMFLL
Mvan_0932|M.vanbaalenii_PYR-1       FGFAGLSLLGWCSFLLLWVLQACVFWRGMESIRKFIDFCGPAVYVVMFLL
MAB_2936|M.abscessus_ATCC_1997      YGFLGLSLLGWGGFLLMWVLQAAVFWNGMEAIRKFIDFCGPAVYAVMLAL
Mflv_3170|M.gilvum_PYR-GCK          NSVLGLSTLGWISFVVLWVVRVIIVSYGMEMIRRYEAFAGPVILVTMIAL
                                     .. **. *** .::::**::. :.  *** **::  *.**.: ..:: *

MMAR_1212|M.marinum_M               SGYLISKAGWAAIDLNLG-DVRYSGWDAIPVMLGAIALVVSYFSGPMLNF
MUL_2680|M.ulcerans_Agy99           SGYLISTAGWAAIDLNLG-DVRYSGWDAIPVMLGAIALVVSYFSGPMLNF
MSMEG_5730|M.smegmatis_MC2_155      CGYLIFQAGWGAIDLSLG-EVTYTGWSSVPVMLGAIALVVSYFSGPMLNF
Mvan_0932|M.vanbaalenii_PYR-1       CGYLISEAGWGAIDLNLG-DVTYTGWSSVPVMLGAIALVVSYFSGPMLNF
MAB_2936|M.abscessus_ATCC_1997      ALYLVVAAGWENVHFGLASGPPKSGFAALATILSAIALVVSYFSGPMLNF
Mflv_3170|M.gilvum_PYR-GCK          AVWMLNNADWS-IAWSTP--DSLTGVDMWLKIIGGASLWVAIYGTFVLNF
                                    . :::  *.*  :  .       :*      ::.. :* *: :.  :***

MMAR_1212|M.marinum_M               GDFSRYGRSFGAVRKGNFLGLPLNFLLFSLLVVVTASLTVPVFG-----E
MUL_2680|M.ulcerans_Agy99           GDFSRYGRSFGAVRKGNFLGLPLNFLLFSLLVVVTASLTVPVFG-----E
MSMEG_5730|M.smegmatis_MC2_155      GDFSRYGRTFAAVKKGNFLGLPVNFLVFSVLVVVTASLTLPVFG-----E
Mvan_0932|M.vanbaalenii_PYR-1       GDFSRYGKSFEAVKKGNFLGLPVNFLLFSVLVVVTASLTLPVFG-----E
MAB_2936|M.abscessus_ATCC_1997      GDFSRYGRTFGEVKRGNFLGLPLNFLFFAVLAVCTVSAGATVIGRGEDGA
Mflv_3170|M.gilvum_PYR-GCK          CDFTRNATSKRAIVHGNFWGIPLNMLVFGGIVITLAGAQFRIDG-----R
                                     **:* . :   : :*** *:*:*:*.*. :.:  ..    : *      

MMAR_1212|M.marinum_M               LITDPVQTVARIDSTFAIILGASTFTIATIGINIVANFISPAFDFSNVNP
MUL_2680|M.ulcerans_Agy99           LITDPVQTVARIDSTFAIILGASTFTIATIGINIVANFISPAFDFSNVNP
MSMEG_5730|M.smegmatis_MC2_155      LITDPVETVARIDSTFAIVLGALTFAIATIGINIVANFISPAFDFSNVSP
Mvan_0932|M.vanbaalenii_PYR-1       LITDPVETVARIDSTFAIVLGALTFATATIGINIVANFISPAFDFSNVSP
MAB_2936|M.abscessus_ATCC_1997      IITDPVLIVDKINNTTAAVLGVLTFAIATIGINIVANFVSPAFDFSNLAP
Mflv_3170|M.gilvum_PYR-GCK          IIEAPADIVQEVPNTFLLVLAALALLILTIAVNLMANFVAPIYALNNLFP
                                    :*  *.  * .: .*   :*.. ::   **.:*::***::* : :.*: *

MMAR_1212|M.marinum_M               QRISWRTGGMIAAVGSALITPWNLYNHPDVIHYTLETLGAFIGPLFGVLI
MUL_2680|M.ulcerans_Agy99           QRIGWRTGGMIAAVGSALITPWNLYNHPDVIHYTLETLGAFIGPLFGVLI
MSMEG_5730|M.smegmatis_MC2_155      QRISWRAGGMIAAVGSVLITPWNLYNNPEVIHYTLETLGAFIGPLFGVLI
Mvan_0932|M.vanbaalenii_PYR-1       QRISWRAGGMIAAVGSVLITPWNLYNNPEVIHYTLETLGAFIGPLFGVLI
MAB_2936|M.abscessus_ATCC_1997      TRISWRTGGMIAAVGSILITPWNLYNNPNTIHYTLDALGAVIGPLFGILI
Mflv_3170|M.gilvum_PYR-GCK          KHLNFRRAAFISAVIGLVILPWNLYNTPAVINYFLGGLGAILGPLFGIIM
                                     ::.:* ..:*:** . :* ****** * .*:* *  ***.:*****:::

MMAR_1212|M.marinum_M               ADYYLVRKQHVVVDDLFSLSHDGTYWYRKGYNPAAVIATAVSAAIAMVPV
MUL_2680|M.ulcerans_Agy99           ADYYLVRKQHVVVDDLFSLSHDGTYWYRKGYNPAAVIATAVSAAIAMAPV
MSMEG_5730|M.smegmatis_MC2_155      ADFYLVRKQKVIVDDMFTLDESGKYWYTKGYNKVAVIATVVGAVLAVIPV
Mvan_0932|M.vanbaalenii_PYR-1       ADYYLVRKQQVVVDDLFTMEESGKYWYTKGYNRVAVLATAVGAVLAVVPV
MAB_2936|M.abscessus_ATCC_1997      ADFYLVRRRAVVVDDLFTLSPSGTYQYRGGINPIAVTATVLGALLAIATV
Mflv_3170|M.gilvum_PYR-GCK          ADYWLVRRSKINVLALFTTDADGEYHYAKGVNVRAVIALVITAVAALLLA
                                    **::***:  : *  :*: . .* * *  * *  ** * .: *  *:  .

MMAR_1212|M.marinum_M               LAS-DVYGMYTAAEYSWFIGCGVALVVYYLLA-TRGRLAIAPPYHPVGAG
MUL_2680|M.ulcerans_Agy99           LAS-DV--------------------------------------------
MSMEG_5730|M.smegmatis_MC2_155      LLGGSVAGMHTAAQYSWFIGCGIAFGLYYVLA-KRDTLVAASVS------
Mvan_0932|M.vanbaalenii_PYR-1       LLGGSVAGMATAAQYSWFIGCGVAFAIYYLVA-KRDTLVAASLS------
MAB_2936|M.abscessus_ATCC_1997      IWG-----SPYLATFTWFVGAGIGFAVYLVGM-RYTPRHLIYGR------
Mflv_3170|M.gilvum_PYR-GCK          FVP----AFAVVAEFSWFIGAGLGAIVYLVVADRRGPFNDVSGEPIAVDS
                                    :                                                 

MMAR_1212|M.marinum_M               --
MUL_2680|M.ulcerans_Agy99           --
MSMEG_5730|M.smegmatis_MC2_155      --
Mvan_0932|M.vanbaalenii_PYR-1       --
MAB_2936|M.abscessus_ATCC_1997      --
Mflv_3170|M.gilvum_PYR-GCK          TH