For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSHDTTSTAGGVANDIKPFNPKQVTLEVFGAPG TVATINYLDVDATPRQVLDTTLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAY TFCLDKSS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1582 | mmpS6 | - | 100% (148) | membrane protein |
M. bovis AF2122 / 97 | Mb0410c | mmpS1 | 2e-40 | 56.74% (141) | membrane protein |
M. bovis AF2122 / 97 | Mb0459c | mmpS4 | 3e-38 | 52.86% (140) | membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2704 | - | 2e-31 | 42.45% (139) | membrane family protein |
M. tuberculosis H37Rv | Rv0403c | mmpS1 | 2e-40 | 56.74% (141) | membrane protein |
M. leprae Br4923 | MLBr_02377 | - | 1e-40 | 53.06% (147) | hypothetical protein MLBr_02377 |
M. abscessus ATCC 19977 | MAB_3149 | - | 1e-36 | 48.20% (139) | MmpS family protein |
M. marinum M | MMAR_1696 | - | 1e-57 | 73.38% (139) | hypothetical protein MMAR_1696 |
M. avium 104 | MAV_3864 | - | 2e-57 | 67.57% (148) | MmpS4 protein |
M. smegmatis MC2 155 | MSMEG_3495 | - | 1e-37 | 51.39% (144) | MmpS5 protein |
M. thermoresistible (build 8) | TH_2866 | - | 9e-39 | 54.01% (137) | PUTATIVE hypothetical protein Mvan_3834 |
M. ulcerans Agy99 | MUL_1935 | - | 8e-54 | 72.18% (133) | hypothetical protein MUL_1935 |
M. vanbaalenii PYR-1 | Mvan_3834 | - | 5e-36 | 48.92% (139) | hypothetical protein Mvan_3834 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1696|M.marinum_M ---------------MEALVRRGWMMIVAVAVVVIAGFAIYRLHGIFGSH MUL_1935|M.ulcerans_Agy99 ------------------------MMIVAVAVVVIAGFAIYRLHGIFGSH Mb1582|M.bovis_AF2122/97 ----------MQGISVTGLVKRGWMVLVAVAVVAVAGFSVYRLHGIFGSH MAV_3864|M.avium_104 ----------MKGFSIASLVKRGWMVLVVVVVVGVAGFCVYRLHGIFGSH Rv0403c|M.tuberculosis_H37Rv ---------------MFGVAKRFWIPMVIVIVVAVAAVTVSRLHSVFGSH MAB_3149|M.abscessus_ATCC_1997 ---------------MFRTIRKIWMPLLIAAVVAIGGFAVFRVRGIFGSE MSMEG_3495|M.smegmatis_MC2_155 MMAVDTKDKQRKKFSISALARRFWIPLLIGAVVFVGAFTVMRVRTFFGSG MLBr_02377|M.leprae_Br4923 ----MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASE Mflv_2704|M.gilvum_PYR-GCK -------------------MSRAWIPLVLVIVLLVAGFTVWRLRNMFASH Mvan_3834|M.vanbaalenii_PYR-1 -------------------MTRAWIPLVLVLVLVVGGLAVWRIRNIFGSH TH_2866|M.thermoresistible__bu -----LWTSKAKDSAILTRLARAWIPLVMVVVVAIGGFAVWRIRGIFGSE : :: *: :... : *:: *.* MMAR_1696|M.marinum_M NNASGANGISNEIVPFNPKQVVLDVFGAPGAVATINYLDVNAQPQQVVDA MUL_1935|M.ulcerans_Agy99 NNASGANGISNEIVPFNPKQVVLDVFGAPGAVATINYLDVNAQPQQVVDA Mb1582|M.bovis_AF2122/97 DTTSTAGGVANDIKPFNPKQVTLEVFGAPGTVATINYLDVDATPRQVLDT MAV_3864|M.avium_104 NNTSAAGGISDQTEPFSPKHITLEVFGNPGAVATINYVDINVQPRQVLNA Rv0403c|M.tuberculosis_H37Rv QHAPDTGNL-DPIIAFYPKHVLYEVFGPPGTVASINYLDADAQPHEVVNA MAB_3149|M.abscessus_ATCC_1997 SFGASADNNAKDAVPYNPKTLVYEIFGEPGAMADVNYFNEDAQPTRVDNV MSMEG_3495|M.smegmatis_MC2_155 DDPSLASAKVDDTKPFDPKVVVYEIYGEPGATADINYLDLDAQPQRVDGA MLBr_02377|M.leprae_Br4923 KRESYADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGA Mflv_2704|M.gilvum_PYR-GCK PLPTYAGSMSADTNKSDPKIVRYEIFGVPGATADINYIDDEGDANQIIGA Mvan_3834|M.vanbaalenii_PYR-1 QLPTYAGSMSEDSNKSDPKIVRYEIFGDPGATADINYIDDEGDPNQIVGA TH_2866|M.thermoresistible__bu QLPTYAGSTSVDTDKANPKRVRYEIFGAPGTVADINYIDAEGDPHQVNGA . :. ** : :::* **: * :.*.: : . .: .. MMAR_1696|M.marinum_M PLPWSFTITTTEPAVLGNVVAQGNGGTIGCRITVNGEVKDERIVNTPDAY MUL_1935|M.ulcerans_Agy99 PLPWSFTITTTEPAVLGNMVAQGNGGTIGCRITVNGEVKDERIVNTPDAY Mb1582|M.bovis_AF2122/97 TLPWSYTITTTLPAVFANVVAQGDSNSIGCRITVNGVVKDERIVNEVRAY MAV_3864|M.avium_104 ALPWSLTMVTTQPGAFSNLVAQGNSDSLGCRITVDGDVKDERIVNQVNAY Rv0403c|M.tuberculosis_H37Rv AVPWSFTIVTTLTAVVANVVARGDGASLGCRITVNEVIREERIVNAYHAH MAB_3149|M.abscessus_ATCC_1997 QLPWAFKIVSTLPSLSGNIVAQGNGDQIGCRITVNGEVKMERVSTEHNAY MSMEG_3495|M.smegmatis_MC2_155 TLPWSLTLSTTAPSVFPNIVAQGNGDTITCRITVDDELKDERTSNGVNAQ MLBr_02377|M.leprae_Br4923 QLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAY Mflv_2704|M.gilvum_PYR-GCK PLPWAIEVETDSPAMVGNIVAQGDGDFIGCRILSDGELKDERTIHNYTAY Mvan_3834|M.vanbaalenii_PYR-1 TLPWSIEVETNSPAMVGNVVAQGDSDFIGCRISADGVVKDERTAHNVSAY TH_2866|M.thermoresistible__bu TLPWSIEIVTNSPAMAGNVLAQGDSDFIGCRIVSDGVVKDERTTQRVSAY :**: : : .. *::*:*: : *** : :: ** * MMAR_1696|M.marinum_M TFCLDKSG MUL_1935|M.ulcerans_Agy99 TFCLDKSG Mb1582|M.bovis_AF2122/97 TFCLDKSS MAV_3864|M.avium_104 TFCLVKSA Rv0403c|M.tuberculosis_H37Rv TSCLVKSA MAB_3149|M.abscessus_ATCC_1997 IYCLVKSA MSMEG_3495|M.smegmatis_MC2_155 TFCLVKSA MLBr_02377|M.leprae_Br4923 TYCLVKSA Mflv_2704|M.gilvum_PYR-GCK IYCFSKAT Mvan_3834|M.vanbaalenii_PYR-1 VYCFTKSA TH_2866|M.thermoresistible__bu VYCFTKSA *: *: