For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRELKVVGLDPDSKTILCEGDIPGERFKLPADDRLRAAVRGDTTLLDQPQLDIQVTNMLSPKEIQARIRA GASVEQVAMASGSDIARIRRFAHPVLLERSRAAELATAAHPVLADGPAVLTLLETVSAALVKRGLEPDKL SWDAWRNEDSRWTVQLMWHAGRSDNLAHFCFTPGAHGGTVTASDDAANELIDPDFNRPLRPLARVAHLDF VEPATPATVTPDNQLVSSRRGKPTIPAWEDVLLGVRSAGQR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. leprae Br4923 | MLBr_02137 | - | - | 100% (251) | hypothetical protein MLBr_02137 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0907c | - | 1e-111 | 79.45% (253) | hypothetical protein Mb0907c |
M. gilvum PYR-GCK | Mflv_1717 | - | 3e-92 | 63.50% (274) | hypothetical protein Mflv_1717 |
M. tuberculosis H37Rv | Rv0883c | - | 1e-111 | 79.45% (253) | hypothetical protein Rv0883c |
M. abscessus ATCC 19977 | MAB_0883c | - | 6e-79 | 56.46% (271) | hypothetical protein MAB_0883c |
M. marinum M | MMAR_4649 | - | 1e-107 | 74.52% (263) | hypothetical protein MMAR_4649 |
M. avium 104 | MAV_1010 | - | 1e-109 | 74.90% (259) | hypothetical protein MAV_1010 |
M. smegmatis MC2 155 | MSMEG_5685 | - | 3e-90 | 61.90% (273) | DNA-binding protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0267 | - | 1e-106 | 74.52% (263) | hypothetical protein MUL_0267 |
M. vanbaalenii PYR-1 | Mvan_5034 | - | 3e-90 | 62.55% (267) | hypothetical protein Mvan_5034 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1717|M.gilvum_PYR-GCK MRELKVVGLDVDGTRIICETGDSGEKFVLRADDRLKAAVRGDRAASNQTT Mvan_5034|M.vanbaalenii_PYR-1 MRELRVVGLDVDGRRIICETGDSGEKFVLRSDDRLKAAVRGDRAGSNQTT MSMEG_5685|M.smegmatis_MC2_155 MRELRVVGLDVDGKRIICETADSAEMFTLRVDDRLRAALRGDKVASNQTE Mb0907c|M.bovis_AF2122/97 MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQ Rv0883c|M.tuberculosis_H37Rv MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQ MLBr_02137|M.leprae_Br4923 MRELKVVGLDPDSKTILCEGDIPGERFKLPADDRLRAAVRGDTTLLDQPQ MAV_1010|M.avium_104 MRELKVVGLDADSKYLICESDDPAEQFKLPADDHLRAVLRHEAEPPEQPQ MMAR_4649|M.marinum_M MRELRVVGLDADGKYILCEGVDSSEKYKLPADDRLRAALKRQSIPPEQPQ MUL_0267|M.ulcerans_Agy99 MRELRVVGLDADGKYILCEGVDSTEKYKLPADDRLRAALKRQPIPPEQPQ MAB_0883c|M.abscessus_ATCC_199 MRELKVIGLSADGKRVICQDANGTDKFAIDADDRLRAAARGDLSRLGQIQ ****:*:**. *. ::*: : : : **:*:*. : : * Mflv_1717|M.gilvum_PYR-GCK IDVEVPNMLRPREIQSKIRAGASVEQIASAAGVDIARVERFAHPVLLERS Mvan_5034|M.vanbaalenii_PYR-1 IDVEVPTLLRPREIQSKIRAGASVEQVAASAGVDIARVERFAHPVLLERA MSMEG_5685|M.smegmatis_MC2_155 IDLEVQSVLRPKEIQAKIRAGASVEQLAAAAGVPVERVERFAHPVLLERA Mb0907c|M.bovis_AF2122/97 LDIEVTNVLSPKEIQARIRAGASVEQVAAASGSDIARIRRFAHPVLLERS Rv0883c|M.tuberculosis_H37Rv LDIEVTNVLSPKEIQARIRAGASVEQVAAASGSDIARIRRFAHPVLLERS MLBr_02137|M.leprae_Br4923 LDIQVTNMLSPKEIQARIRAGASVEQVAMASGSDIARIRRFAHPVLLERS MAV_1010|M.avium_104 LEIEVTNMLSPKEIQAKIRAGASVEQVAAASGSDVSRVRRFAHPVLLERY MMAR_4649|M.marinum_M LDIEVTNMLSPKEIQARIRAGASVEQVATASGSDIARIQRFAHPVLLERS MUL_0267|M.ulcerans_Agy99 LDIEVTNMLSPKEIQARIRAGASVEQVATASGSDIARIQRFAHPVLLERS MAB_0883c|M.abscessus_ATCC_199 IEMESS--LRPREIQARIRAGATVQQVATAAGVDVSRIERFAHPVLLERQ :::: * *:***::*****:*:*:* ::* : *:.********** Mflv_1717|M.gilvum_PYR-GCK RAAELATAAHPVLADGPSVLTLLETVSTALIARGLDPEATTWDAWRNEDS Mvan_5034|M.vanbaalenii_PYR-1 RAAELASAAHPVLADGPSVLTLLETVTSALIARGLDPDGANWDAWRNEDS MSMEG_5685|M.smegmatis_MC2_155 RAAELATAAHPVLADGPSVLTLLETVTKALVARGLDPDAVAWDAWRNEDS Mb0907c|M.bovis_AF2122/97 RAAELATAAHPVLADGPAVLTMQETVAAALVARGLNPDSLTWDAWRNEDS Rv0883c|M.tuberculosis_H37Rv RAAELATAAHPVLADGPAVLTMQETVAAALVARGLNPDSLTWDAWRNEDS MLBr_02137|M.leprae_Br4923 RAAELATAAHPVLADGPAVLTLLETVSAALVKRGLEPDKLSWDAWRNEDS MAV_1010|M.avium_104 RAAELATAAHPMLADGPAVLTLLETVTAAFVTRGLRHDKLSWDAWRNEDN MMAR_4649|M.marinum_M RAAELATAAHPMLADGPAVLTLLETITAALVTRGLNPERLDWDAWRNEDG MUL_0267|M.ulcerans_Agy99 RAAELATAAHPMLADGPAVLTLLETITAALVTRGLNPERLDWDAWRNEDG MAB_0883c|M.abscessus_ATCC_199 RAAEMASAAHPVRNDGPAVSTLADTVAGAMFARGGDPDAIEWDAWKVEDG ****:*:****: ***:* *: :*:: *:. ** : ****: **. Mflv_1717|M.gilvum_PYR-GCK RWTVQLAWKAGLSDNVAHFRYAPGAHGGTVTAFDDAASELIDPTFARPLR Mvan_5034|M.vanbaalenii_PYR-1 RWTVQLAWKAGLSDNVAHFRYAPGAHGGTVTAFDDAAAELIDPNFARPLR MSMEG_5685|M.smegmatis_MC2_155 RWTVQLAWKAGRSDNVAHFRFTPGSHGGLVTASDDAAHQLINPDFARPLR Mb0907c|M.bovis_AF2122/97 RWTVQLAWKAGRSDNLAHFRFTPGAHGGTATAIDDTAHELINPTFNRPLR Rv0883c|M.tuberculosis_H37Rv RWTVQLAWKAGRSDNLAHFRFTPGAHGGTATAIDDTAHELINPTFNRPLR MLBr_02137|M.leprae_Br4923 RWTVQLMWHAGRSDNLAHFCFTPGAHGGTVTASDDAANELIDPDFNRPLR MAV_1010|M.avium_104 RWTVQLAWKVGRSDNVAHFCFTPGAHGGTVTAIDDAATALIDPNFELPLR MMAR_4649|M.marinum_M RWTVQLAWKAGRSDNLAHFRFAPGAHGGTVTAIDDAASELIDPEYKAPLR MUL_0267|M.ulcerans_Agy99 RWTVQLAWKAGRSDNLAHFRFAPGAHGGTVTAIDDAASELIDPEYKAPLR MAB_0883c|M.abscessus_ATCC_199 RWTVQLQWRTGRSDNKAHFRYTPGAHGGTVTALDDSARELIDPTFTRSLR ****** *:.* *** *** ::**:*** .** **:* **:* : .** Mflv_1717|M.gilvum_PYR-GCK PLAPVAQLALGEPEPAPAPTP------APAPAPAPAPESIPEPQAEAPED Mvan_5034|M.vanbaalenii_PYR-1 PVAAVAQLALGEPEDPHAPVQ------AATPAPEPAPVETPEP------- MSMEG_5685|M.smegmatis_MC2_155 PVAAVPQLEFEAPQPAQPAAPPQPAQAVPTPEPAPAPEQEPEP------- Mb0907c|M.bovis_AF2122/97 PLAPVAHLDFDEPE-PAQPT---------LTVPSAQPVS----------- Rv0883c|M.tuberculosis_H37Rv PLAPVAHLDFDEPE-PAQPT---------LTVPSAQPVS----------- MLBr_02137|M.leprae_Br4923 PLARVAHLDFVEPATPATVT------------PDNQLVS----------- MAV_1010|M.avium_104 PLARVAHVDFDEPAKPPTAEAPA----AEPAEPEEKPVH----------- MMAR_4649|M.marinum_M PLAPVSHLAFDEPAKPAKQAKPAKPAKQTPPAPAEQPAS----------- MUL_0267|M.ulcerans_Agy99 PLAPVSHLAFDEPAKPAKQAKPAKPPKQTPPAPAEQPAS----------- MAB_0883c|M.abscessus_ATCC_199 PVAAVSPL-LPEPEPELFTESP-----APLPEPEPAVAEEHTET----ET *:* *. : : * * Mflv_1717|M.gilvum_PYR-GCK TPAAKTSRPRKSRPAVPAWEDVLLGVRSSGGQR Mvan_5034|M.vanbaalenii_PYR-1 APTVKTPRPRKSRPAVPAWEDVLLGVRSSGGQR MSMEG_5685|M.smegmatis_MC2_155 APAPAPKRSRKARATVPAWEDVLLGVRSSGTQR Mb0907c|M.bovis_AF2122/97 --------NRRGKPAIPAWEDVLLGVRSGG-RR Rv0883c|M.tuberculosis_H37Rv --------NRRGKPAIPAWEDVLLGVRSGG-RR MLBr_02137|M.leprae_Br4923 --------SRRGKPTIPAWEDVLLGVRSAG-QR MAV_1010|M.avium_104 --------TRRGKPVIPAWEDVLLGVRSGG-QR MMAR_4649|M.marinum_M --------SRRGKPAIPAWEDVLLGVRSSG-QR MUL_0267|M.ulcerans_Agy99 --------SRRGKPAIPAWEDVLLGVRSSG-QR MAB_0883c|M.abscessus_ATCC_199 TQAPAPRRSRRSKPAVPTWEDVLLGVRSSG-QN *:.:..:*:**********.* :.