For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LHCSSGAVTALEITGGVMTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYL GNFGPTFTSSSDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISEMIN MPAGFSIGWAMWFILVCSVLQAIAAVAALLLEAGIITAPAPRLSYDPYLQYGQYGAQSYYGQPNRQLQVG LNAHSPQQSPAGYGAQYGAYTSSPTQIQAGMPATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQ AGSAPVSYSNPTDSKQGFGQGRESTSSSSGSAPV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_00158 | - | - | 100% (314) | 34 kDa antigen |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0979 | - | 3e-88 | 54.92% (315) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_1872 | - | 3e-39 | 35.26% (312) | hypothetical protein Mflv_1872 |
| M. tuberculosis H37Rv | Rv0954 | - | 3e-88 | 54.92% (315) | transmembrane protein |
| M. abscessus ATCC 19977 | MAB_1061 | - | 7e-27 | 32.13% (333) | 34 kDa antigenic protein |
| M. marinum M | MMAR_4545 | - | 3e-90 | 55.63% (311) | transmembrane protein |
| M. avium 104 | MAV_1078 | - | 6e-98 | 62.30% (313) | 34 kDa antigenic protein |
| M. smegmatis MC2 155 | MSMEG_5518 | - | 3e-40 | 37.38% (313) | antigen 34 kDa |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_4715 | - | 2e-91 | 56.17% (308) | transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_4859 | - | 9e-46 | 39.93% (293) | hypothetical protein Mvan_4859 |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_00158|M.leprae_Br4923 MHCSSGAVTALEITGGVMTYLPGSPGY----PLVQPAGSYPGATPSFVKS
MAV_1078|M.avium_104 -----------------MTYSPGSPGY----PPAQSGGTYAGATPSFAKD
Mb0979|M.bovis_AF2122/97 -----------------MTYSPGNPGY----PQAQPAGSYGGVTPSFAHA
Rv0954|M.tuberculosis_H37Rv -----------------MTYSPGNPGY----PQAQPAGSYGGVTPSFAHA
MMAR_4545|M.marinum_M -----------------MTYTPGSPGY----PPAQSGGSYGGATPSFAQA
MUL_4715|M.ulcerans_Agy99 -----------------MTYTPGSPGY----PPAQSGGSYGGATPSFAQA
Mflv_1872|M.gilvum_PYR-GCK -----------------MTYPQGAPGG--FPPAQQPTNQFSAPTQQFSTL
Mvan_4859|M.vanbaalenii_PYR-1 -----------------MSYPQGAPGGQGFPPGQQPTTQFSAPTQQFNRV
MSMEG_5518|M.smegmatis_MC2_155 -----------------MTYPPSSPGY---PPAPQSGSQYGA-TQPFGKP
MAB_1061|M.abscessus_ATCC_1997 -----------------MTYSTGGPGY----QPAQPSNPYGT--PSFVAE
*:* . ** *. : *
MLBr_00158|M.leprae_Br4923 D-------VGESQLYHYLTIAVVVLGLAVYLGNFGPTFTSSS-DIGPGSG
MAV_1078|M.avium_104 D-------DGKSKLPLYLNIAVVALGFAAYLLNFGPTFTIGA-DLGPGIG
Mb0979|M.bovis_AF2122/97 D-------EGASKLPMYLNIAVAVLGLAAYFASFGPMFTLST-ELGGGDG
Rv0954|M.tuberculosis_H37Rv D-------EGASKLPMYLNIAVAVLGLAAYFASFGPMFTLST-ELGGGDG
MMAR_4545|M.marinum_M D-------DAASKLPMYLNVAVAVLGFLAYLASFGPMFTISS-ELGGGSS
MUL_4715|M.ulcerans_Agy99 D-------DAASKLPMYLNVAVAVLGFLAYLASFGPMFTISS-ELGGGSS
Mflv_1872|M.gilvum_PYR-GCK PPDNEQSQAGANKLPTYLAGATALLGLLTYLASFGPKLSLDD--AQIDVS
Mvan_4859|M.vanbaalenii_PYR-1 P-DADPVAEGPSKLPVYLSAAVVALGLLVYMSSFGPHFTASDFSAFGELT
MSMEG_5518|M.smegmatis_MC2_155 A---ETAPAGESSLPQILLGVAAAAGLIAYFVSYG----IED----AQFA
MAB_1061|M.abscessus_ATCC_1997 P--------NTGALGVYLPGGVLVLSLIGFIAGFGPFYTGKASSGTSGSF
. * * . .: :: .:*
MLBr_00158|M.leprae_Br4923 G------FAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGAL
MAV_1078|M.avium_104 G------RAGDAGTAVVVALLAALLAGLGLLPKAKSYVGVVAVVAVLGAL
Mb0979|M.bovis_AF2122/97 A------VSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVF
Rv0954|M.tuberculosis_H37Rv A------VSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVF
MMAR_4545|M.marinum_M E------ASGDTVLAVGMALLAGLLAGVSLLPKVKSYGAVVAVVSILGVF
MUL_4715|M.ulcerans_Agy99 E------ASGDTVLAVGMALLAGLLAGVSLLPKVKSYGAVVAVVSILGVF
Mflv_1872|M.gilvum_PYR-GCK L------SPVRLDLALVAAVLAGLIAGVGLLPRQTPRPALVAVLSLLGFL
Mvan_4859|M.vanbaalenii_PYR-1 G------SSFGVILAVISAITAGLFAAVGLLPRQNNFTAVAAVAAVLALL
MSMEG_5518|M.smegmatis_MC2_155 V------GAPIVQVIVVAALAGALLAGVSLLPKQKNHAGVASVLALVAFL
MAB_1061|M.abscessus_ATCC_1997 GGFDLLALSPVFGFAQFALLIAGLTAGVSLLSGKDDKQAPVAILSIVGFL
. : ..* *.: *:. .. .::. :
MLBr_00158|M.leprae_Br4923 LAISEMINMPAGFSI-----GWAMWFILVCSVLQAIAAVAALLLEAGIIT
MAV_1078|M.avium_104 LAITETINLPAGFAI-----GWAMWPLVACVVLQAIAAVVVVLLDAGVIT
Mb0979|M.bovis_AF2122/97 LMVSATFNKPSAYST-----GWALWVVLAFIVFQAVAAVLALLVETGAIT
Rv0954|M.tuberculosis_H37Rv LMVSATFNKPSAYST-----GWALWVVLAFIVFQAVAAVLALLVETGAIT
MMAR_4545|M.marinum_M LMISSTFNKPSAFST-----GWALWIVLVCIVFQAVAAVGALLLETGVVS
MUL_4715|M.ulcerans_Agy99 LMISSTFNKPSAFST-----GWALWIVLVCIVFQAVAAVGALLLETGVVS
Mflv_1872|M.gilvum_PYR-GCK IALATLFDGFEGTTV-----GWGVYLVIAFTLLQAAVAVVCLLFDSGIIT
Mvan_4859|M.vanbaalenii_PYR-1 LVVAEIINKPAEASI-----GWGLYLVIAFILLQAAVSVVVLLFDAGIIT
MSMEG_5518|M.smegmatis_MC2_155 QSVYLVI--LAGSDS-----GWAFITILVLTLIQAGAALTVLLFDSGILT
MAB_1061|M.abscessus_ATCC_1997 FVLGGLFGNPFAAAVGEVGIGWGLITLAVVSGLQAAVSVYSLLSEVGVIK
: : **.. : . :** .:: :* : * :.
MLBr_00158|M.leprae_Br4923 APAPRLSYDP-YLQYGQY------GAQS--YYGQPNRQ----LQVGLNAH
MAV_1078|M.avium_104 APAPRPKYDP-YAQYGQYGQYGQYGQQP--YYGQPGGQP--GGQPGGQQH
Mb0979|M.bovis_AF2122/97 APAPRPKFDP-YGQYGRYGQYGQYGVQPGGYYGQQGAQ----QAAGLQSP
Rv0954|M.tuberculosis_H37Rv APAPRPKFDP-YGQYGRYGQYGQYGVQPGGYYGQQGAQ----QAAGLQSP
MMAR_4545|M.marinum_M APAPRPKFDP-YGQYGQYGQYGQYGGQPGGYYGQPGAQ----QSA----P
MUL_4715|M.ulcerans_Agy99 APAPRPKFDP-YGQYGQYGQY---GGQPGGYYGQPGAQ----QSA----P
Mflv_1872|M.gilvum_PYR-GCK PPVPRPKYDQHQQQYGQYSGG---------YYGQQHGQQHGQQHGGPQQQ
Mvan_4859|M.vanbaalenii_PYR-1 PPVPRPKYEQ-PQSYGQYPG----------YYGQPPTQGGSGQH----QQ
MSMEG_5518|M.smegmatis_MC2_155 PPPPKPAYEQ-QPQYGQYGAPSQ-------YYGQQPGQQPGQQPGQHGQQ
MAB_1061|M.abscessus_ATCC_1997 AKTASPAANPFGNQYQPQQS----------YYTPAQQQPQQQLPKQGQGQ
. . : .* ** *
MLBr_00158|M.leprae_Br4923 SPQQSPA---------GYGAQYGAYTS-----SPTQIQAGMPATGGFSA-
MAV_1078|M.avium_104 GQQHSPQ---------GYGSQYGGYGQG---GAPTGGFGAQPSPQSGPQ-
Mb0979|M.bovis_AF2122/97 GPQQSPQ-------PPGYGSQYGGYSSSPSQSGSGYTAQPPAQPPAQSG-
Rv0954|M.tuberculosis_H37Rv GPQQSPQ-------PPGYGSQYGGYSSSPSQSGSGYTAQPPAQPPAQSG-
MMAR_4545|M.marinum_M NPQQSPQQ------PSGYGSQYGGFTSS---QGSNPSSGGFSAPQAQSA-
MUL_4715|M.ulcerans_Agy99 NPQQSPQQ------PSGYGSQYGGFTSS---QGSNPSSGGFSAPQAQSA-
Mflv_1872|M.gilvum_PYR-GCK GSQQQGLQ-----QRPGYPTPYGGYSG------SGQTTGGFPA-------
Mvan_4859|M.vanbaalenii_PYR-1 GPQQQ--------QRPGYPTPYGGYPG------SGPGTGGFPAG------
MSMEG_5518|M.smegmatis_MC2_155 PGQQQGQPSYQQGQRPGYPSQYGGYS-------AGPSTGGFPTPGSQPGG
MAB_1061|M.abscessus_ATCC_1997 SYGQAQGYGQQQGYGQQQPAQGYGQSGAQAAPGYGQQQSAPAAPPSYGGY
: : . .
MLBr_00158|M.leprae_Br4923 -QHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQGF
MAV_1078|M.avium_104 -QSAQQQGPSTPPTGFPSFSPPPNVG--GGSDSGSATANYSEQAGGQQSY
Mb0979|M.bovis_AF2122/97 -SQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSG-----
Rv0954|M.tuberculosis_H37Rv -SQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSG-----
MMAR_4545|M.marinum_M -PQPMHQTPSTPPTGFPSFSPPPSVSAGTGSQGGSAPVNYGNPGGGQQNY
MUL_4715|M.ulcerans_Agy99 -PQPMHQTPSTPPTGFPSFSPPPSVSAGTGSQGGSAPVNYANPSGAQQNY
Mflv_1872|M.gilvum_PYR-GCK ----AQSGPPTPPTGFPTYGQPPANN----TPTTQVPTQ--QQSPPQS--
Mvan_4859|M.vanbaalenii_PYR-1 ----AQSGPPTPPTGFPTYGQPPASN----TPTSQAPAP--HQSPS----
MSMEG_5518|M.smegmatis_MC2_155 QQHGQQSGPPTPPTGFPTYGQPQQSSGPSSAPTSQVPAQPQQQQPGQQ--
MAB_1061|M.abscessus_ATCC_1997 GQQQPQSAPPTPPQGFSSSGFTPPSSQPAQQAASSQPTQQYPTFGAASGQ
:. *.*** **.: . . . . ..
MLBr_00158|M.leprae_Br4923 GQGRESTSSSSGSAPV----------------
MAV_1078|M.avium_104 GQ---EPSSPSGPTPA----------------
Mb0979|M.bovis_AF2122/97 ----GEQSSSPGGAPV----------------
Rv0954|M.tuberculosis_H37Rv ----GEQSSSPGGAPV----------------
MMAR_4545|M.marinum_M GQ--GQQSSSPGSAPV----------------
MUL_4715|M.ulcerans_Agy99 GQ--GQQSSSPGSAPV----------------
Mflv_1872|M.gilvum_PYR-GCK -----GQSSQSGQSSPSGQSSP----------
Mvan_4859|M.vanbaalenii_PYR-1 -------SSQPGQSSS----------------
MSMEG_5518|M.smegmatis_MC2_155 -----PSSPQSGQSSS----------------
MAB_1061|M.abscessus_ATCC_1997 AAGGEQQSSAGAGGGSASASGDDLFGTSRPSN
*. .