For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAEVQ RTTTSLGVQAAQLPKIGADLEKVAAALAEAQRSGRGEISSLEGALQDLDDQVGEAVELEKNPQLTASERQ LLDHYIDGLEKHAIDDTKASVANLTRIRDQYSQQLHTSMANLREQDGYDPPIQAFDGDVPESPSQEQRRH NQIEAFKQVFGREPASAADWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVRSF PPWKRDLGNNRGANPNFDPEDTKVRCADSPTRHRLWTSHRHPFCAPSAHRQCSSRLITKSGRLVMRSSAR EPFFDAEAWRIATVSAPFVVQGVLALLMLTLWLLGEGPFKTHSAYAGERAWMVTASLIASAVSLSISVPL AWTPSSRRRGISLSLAGCSALVLVGGVLYAYLTMR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_5295 | - | - | 100% (455) | hypothetical protein MAV_5295 |
M. avium 104 | MAV_0031 | - | 3e-50 | 50.72% (207) | hypothetical protein MAV_0031 |
M. avium 104 | MAV_1467 | - | 2e-48 | 53.51% (185) | hypothetical protein MAV_1467 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2105 | - | 3e-55 | 56.93% (202) | hypothetical protein Mb2105 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2079 | - | 4e-55 | 56.93% (202) | hypothetical protein Rv2079 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_3061 | - | 1e-57 | 54.05% (222) | hypothetical protein MMAR_3061 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_5057 | - | 6e-49 | 50.98% (204) | hypothetical protein MUL_5057 |
M. vanbaalenii PYR-1 | Mvan_1151 | - | 5e-25 | 45.60% (125) | hypothetical protein Mvan_1151 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2105|M.bovis_AF2122/97 MQLRHINIRALIAEAGGDPWAIEHSLHAGRPAQIAELAEAFHAAGRCTAE Rv2079|M.tuberculosis_H37Rv MQLRHINIRALIAEAGGDPWAIEHSLHAGRPAQIAELAEAFHAAGRYTAE MUL_5057|M.ulcerans_Agy99 MQPRYISNPLLIAEAGGGPWAINQSLQLGRPAQISDLATAFHDAGRSTTE MAV_5295|M.avium_104 ------------MFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGE MMAR_3061|M.marinum_M MQLRYIGIPLLIAEAGGDPWAIDQSLQAGRPAQISDLGAAFHAAGRCTAE Mvan_1151|M.vanbaalenii_PYR-1 --------------------------MGVLEAFLSTWSKARATFGAGTPE * :: . * * * * Mb2105|M.bovis_AF2122/97 ANAAFEEARRRFEASWNRENGEHPINDSAEVQRVTAALGVQSLQLPKIGV Rv2079|M.tuberculosis_H37Rv ANAAFEEARRRFEASWNRENGEHPINDSAEVQRVTAALGVQSLQLPKIGV MUL_5057|M.ulcerans_Agy99 ADTAFEQARRRFETSWNRENGAHPINDSPQVQGLTTSLRSQAARLPEIGL MAV_5295|M.avium_104 AEAAFNLARGRFEQAWTHENDENPINGSAEVQRTTTSLGVQAAQLPKIGA MMAR_3061|M.marinum_M ADAAFDQARRRFEEAWNRQNSERPINDSAEVQRVAQSLGAQSLELPKIGV Mvan_1151|M.vanbaalenii_PYR-1 PGSSYDESATLTGLSRDLDEAAPTAHWSG---GAAEAYGTANADHRRVVG . :::: : : :: . : * : : .: Mb2105|M.bovis_AF2122/97 DLENIAADLAEAQRAAAGRIATLESQLQRIDDQLDQALELEHDPRLAAAE Rv2079|M.tuberculosis_H37Rv DLENIAADLAEAQRAAAGRIATLESQLQRIDDQLDQALELEHDPRLAAAE MUL_5057|M.ulcerans_Agy99 QLDNIAGGLAGAQRSATGQIVGLETQLCDIDSEIGEVLALEHGAQLTTAD MAV_5295|M.avium_104 DLEKVAAALAEAQRSGRGEISSLEGALQDLDDQVGEAVELEKNPQLTASE MMAR_3061|M.marinum_M DLENIAAALAEVQRSSSGKIAGLEGQLRQLDDEIGQAVMLERNHQLTAED Mvan_1151|M.vanbaalenii_PYR-1 ELGLLDRRLADQIDRSAQIVTAGRQDLEAIREWVVAAAASVPRNRAGELM :* : ** . : . * : . : . : Mb2105|M.bovis_AF2122/97 RSELDALITCLEQDAIDDTASALGQLQSIRAGYSDHLQQSLAMLRADGYD Rv2079|M.tuberculosis_H37Rv RSELDALITCLEQDAIDDTASALGQLQSIRAGYSDHLQQSLAMLRADGYD MUL_5057|M.ulcerans_Agy99 RLALEAIVCALEDQAVGDTQSAVSQLHSIRAGYAGLLHQAPTSLSADGFD MAV_5295|M.avium_104 RQLLDHYIDGLEKHAIDDTKASVANLTRIRDQYSQQLHTSMANLREQDGY MMAR_3061|M.marinum_M KAALDAFMHACEDDAIRDTQAALAELNSIRDGYSNFLRTAEKSLAVDGLD Mvan_1151|M.vanbaalenii_PYR-1 VAPIVRQGLSQLAEVVTRANADLSAVGGNIATIGGEFQALGFGRQFGGLP : ..: : : :. : . :: . Mb2105|M.bovis_AF2122/97 GAGLQGLDAPQSPVKL-EEPIQIPPPGTGAPEVHRWWTSLTSEERQRLIA Rv2079|M.tuberculosis_H37Rv GAGLQGLDAPQSPVKP-EEPIQIPPPGTGAPEVHRWWTSLTSEERQRLIA MUL_5057|M.ulcerans_Agy99 PAVIQALDAPQSPAEP-AEVIAIAAPTASAEEVKKWWDSLSPQQRGRLID MAV_5295|M.avium_104 DPPIQAFDG-DVPESP-SQEQRRHNQIEAFKQVFGREPASAADWETAAAL MMAR_3061|M.marinum_M PARIWGADNHEPESAE-QAEQDVHDALAGDQGAAGRVNAVLGSITPDQLA Mvan_1151|M.vanbaalenii_PYR-1 EAPPPEGDGEAPPPEGGAESERTRNQIDAFREVFGRDPASDSDWLTASAL . * . . : . Mb2105|M.bovis_AF2122/97 EHPEQIGNLNGVPVSARSDAN---IAVMTRDLNRVRDIATRYRTSVDDVL Rv2079|M.tuberculosis_H37Rv EHPEQIGNLNGVPVSARSDAN---IAVMTRDLNRVRDIATRYRTSVDDVL MUL_5057|M.ulcerans_Agy99 EHPPELGNLNGINAITRDLVN---QAVMDDDITRVESVAMQRGVSADDIV MAV_5295|M.avium_104 DSQTYDSKFNGAKSEIRVVRI---RPVPGQGVVRVSQWIEQR-------- MMAR_3061|M.marinum_M GKVPLTAEQASVLSQLQAQEHGMSVGALTATEQRLGAQRAMIADSWQLMS Mvan_1151|M.vanbaalenii_PYR-1 DPHSYDPKNQGVDANVVVARI---EPVPGQGVVRTNLFIPSE-----DVW : . . * Mb2105|M.bovis_AF2122/97 GDPAKYGLSAGDITRYRNADETKKGLDHNARNDPRNPSPVYLFAYDPMAF Rv2079|M.tuberculosis_H37Rv GDPAKYGLSAGDITRYRNADETKKGLDHNARNDPRNPSPVYLFAYDPMAF MUL_5057|M.ulcerans_Agy99 NNPQKYGLSASDVTRYRNAIRTRDGLIYDREHATDDPRPVMLWAYDPLAF MAV_5295|M.avium_104 -DVRSFPPWKRDLGNNRGANPNFDPEDTKVR-CADSPTRHRLWTSHRHPF MMAR_3061|M.marinum_M NPNISFPKTPLTVGAKQGSDTVKGGVTQLPESVQQALNSPGVLFTHQMND Mvan_1151|M.vanbaalenii_PYR-1 APTFDWPPYDNNLGDNRGFSPTAGPEASRVAIYTDFDNGIVVARQNPSIN .: : :. : . Mb2105|M.bovis_AF2122/97 GGKGRAAIAIGNPDTAKHTAVIVPGTSSSVKGGWLHDNHDDALNLFNQAK Rv2079|M.tuberculosis_H37Rv GGKGRAAIAIGNPDTAKHTAVIVPGTSSSVKGGWLHDNHDDALNLFNQAK MUL_5057|M.ulcerans_Agy99 NGEGKAAIAIGNPDYARNTAVIVPGAGSSVAQGWMSD-HDDATNLYDQAL MAV_5295|M.avium_104 CAPS---------------------------------------------- MMAR_3061|M.marinum_M IAGVVKDGDRGFQTNTELDRAMIHKASVMMDTPIWHADPASQGQDVERDP Mvan_1151|M.vanbaalenii_PYR-1 ADTGQVR------------------------------------------- Mb2105|M.bovis_AF2122/97 AADPNNP-TAVIAWMGYDAPNDFTDPRIATPMLARIGGAALAEDVNGLWV Rv2079|M.tuberculosis_H37Rv AADPNNP-TAVIAWMGYDAPNDFTDPRIATPMLARIGGAALAEDVNGLWV MUL_5057|M.ulcerans_Agy99 AADPEHHYTAVIAWMGYDAPNGFSDVRVTEPGLARSGGALLANDVNGLWV MAV_5295|M.avium_104 -----------------------AHRQCSSRLITKSGRLVMRSSAR---- MMAR_3061|M.marinum_M ALDPAVSNVLSAVSPDHQVVHDTITGADHDKFLKNITHHYWKDNGQGVGS Mvan_1151|M.vanbaalenii_PYR-1 -----------------------TGTPSIGAVQTSDGGVLIRYNAADPFS . Mb2105|M.bovis_AF2122/97 THLGVG-QNVTVLGHSYGSTTVADAFALGGMHANDAVLLGCPGTDLAHSA Rv2079|M.tuberculosis_H37Rv THLGVG-QNVTVLGHSYGSTTVADAFALGGMHANDAVLLGCPGTDLAHSA MUL_5057|M.ulcerans_Agy99 THNSLTPQHVTVIGHSYGSTTVADAFAGSGMQANDAILIGCPGTDLARSA MAV_5295|M.avium_104 --------EPFFDAEAWRIATVSAPFVVQGVLALLMLTLWLLGEGPFKTH MMAR_3061|M.marinum_M LFSWTG-DPAVVQGPEEGIAADTAHAYSSYIGGYQQELLHLPGNHTLGQV Mvan_1151|M.vanbaalenii_PYR-1 PGGEGLAKGSGISVN--GTLGIVPSDTGPRVGGDDVTTFPALEVYSDRGG . : . : Mb2105|M.bovis_AF2122/97 ASFHLDGGRVYVGAASTDPISMLGQLDSLSQYVNRGNL------------ Rv2079|M.tuberculosis_H37Rv ASFHLDGGRVYVGAASTDPISMLGQLDSLSQYVNRGNL------------ MUL_5057|M.ulcerans_Agy99 ADFHFDGGQVYVGSASTDPVSWIGESSGVPGELLKGKLR----------- MAV_5295|M.avium_104 SAYAGERAWMVTASLIASAVSLS--------------------------- MMAR_3061|M.marinum_M NPNLVRDMAHGLGPYVNNIAETSGGLPGFGKPLDSETLSGALPVAKGVFS Mvan_1151|M.vanbaalenii_PYR-1 TTTTVLQQWPTFFDNAAGPLTGLPFDKDVGDPTVVPGFN----------- . Mb2105|M.bovis_AF2122/97 ----------------AGQLQGLAVGLGTDPAGDGF-------GSVRFRA Rv2079|M.tuberculosis_H37Rv ----------------AGQLQGLAVGLGTDPAGDGF-------GSVRFRA MUL_5057|M.ulcerans_Agy99 ---------------EYGVPIPLDAGLGRDPAGDGF-------GSVRFHA MAV_5295|M.avium_104 ----------------------ISVPLAWTPSSRRR-------GISLSLA MMAR_3061|M.marinum_M VLSSDNEAAQYFNGQAYAQAVLHEGAFAADPTHSGYNQHLYDAATLRALV Mvan_1151|M.vanbaalenii_PYR-1 ----------------------SVVPQLVPPAIPGV-------GEPAPMP *: . Mb2105|M.bovis_AF2122/97 EVPNSDGINPHDHSYYYHRGSEALRSMADIASGHGDALASDGMLAQPRHQ Rv2079|M.tuberculosis_H37Rv EVPNSDGINPHDHSYYYHRGSEALRSMADIASGHGDALASDGMLAQPRHQ MUL_5057|M.ulcerans_Agy99 EVPGSGTMDRHDHSHYYVMGSESLRSITDISSGHPDRLASDDLIAEGRRQ MAV_5295|M.avium_104 GCSALVLVGGVLYAYLTMR------------------------------- MMAR_3061|M.marinum_M DVGTHNAFQANEDNGYHQGVSEYQSKKSAYETGLQGLTAAGGFVPGVGRI Mvan_1151|M.vanbaalenii_PYR-1 VTPPMSIVPPGNFTPFGPAGDAPTVRVYTPLQGTEFLPGR---------- . Mb2105|M.bovis_AF2122/97 PGVEIDIPGLGSVEIDIPGTPASIDPEWSRPPGSITDDHVFDAPLHR--- Rv2079|M.tuberculosis_H37Rv PGVEIDIPGLGSVEIDIPGTPASIDPEWSRPPGSITDDHVFDAPLHR--- MUL_5057|M.ulcerans_Agy99 P-------HVG--PLRVPGVPAYIDPESDRPRDTVHDDHHYPAYQPPR-- MAV_5295|M.avium_104 -------------------------------------------------- MMAR_3061|M.marinum_M AGPTIGVLGQNLENGILGPAPTAPTENPIQPMSLGMTDQEILNAMLGTGH Mvan_1151|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2105|M.bovis_AF2122/97 -------------------------------------------------- Rv2079|M.tuberculosis_H37Rv -------------------------------------------------- MUL_5057|M.ulcerans_Agy99 -------------------------------------------------- MAV_5295|M.avium_104 -------------------------------------------------- MMAR_3061|M.marinum_M TVTGLPPGYIVYDDDHPNGRIATLEELEPQGVTPGQYSNVIGPALSQSLE Mvan_1151|M.vanbaalenii_PYR-1 -------------------------------------------------- Mb2105|M.bovis_AF2122/97 -------------------------------- Rv2079|M.tuberculosis_H37Rv -------------------------------- MUL_5057|M.ulcerans_Agy99 -------------------------------- MAV_5295|M.avium_104 -------------------------------- MMAR_3061|M.marinum_M PRPPSESLSPDAALVSRYDDIVGVPHPDQGRK Mvan_1151|M.vanbaalenii_PYR-1 --------------------------------