For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GYSAADESFTHQLPTTFDQVHDADPTWSDRCYFFAAAPDGTMLLASGYGNNPNTASGLGYVKVSLADGRH WDLLSGRPVTGDDRGELRAGPMRWTCVEPLKKWRLDVGPNNSGIEWELYYEPTAPMWELLPMKVSGPDGR LLADMYHMKEPGRWSGWVRIDGQRVSVDGFHGGRDRTFGVRVSDRIDFWLWLDAGFGDHAIEAWVIESCD GTVLYADGGITYADGTLSKRFVKIEHEVEFDGERKRPARAVLVFTDEDGRAHRVVAEAPHPQVNAYYGLP MAHCHYEDLGGGSYFIHFAWDSSDPEQLSETEDKSMALDQLMRFERDGHTGWGIFELLLGGQGYRRYPNW RAMDMSAFTQDKTPVDRLPADGDGADR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_5274 | - | - | 100% (378) | hypothetical protein MAV_5274 |
M. avium 104 | MAV_4060 | - | 1e-11 | 24.59% (362) | hypothetical protein MAV_4060 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3194 | - | 2e-13 | 28.51% (221) | hypothetical protein Mb3194 |
M. gilvum PYR-GCK | Mflv_4498 | - | 2e-10 | 24.31% (362) | hypothetical protein Mflv_4498 |
M. tuberculosis H37Rv | Rv3169 | - | 2e-13 | 28.51% (221) | hypothetical protein Rv3169 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4483 | - | 2e-12 | 30.16% (189) | hypothetical protein MAB_4483 |
M. marinum M | MMAR_1392 | - | 3e-13 | 24.93% (365) | hypothetical protein MMAR_1392 |
M. smegmatis MC2 155 | MSMEG_4982 | - | 2e-17 | 29.83% (181) | hypothetical protein MSMEG_4982 |
M. thermoresistible (build 8) | TH_0414 | - | 2e-16 | 22.61% (376) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2484 | - | 2e-13 | 24.93% (365) | hypothetical protein MUL_2484 |
M. vanbaalenii PYR-1 | Mvan_3398 | - | 0.0 | 84.01% (369) | hypothetical protein Mvan_3398 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1392|M.marinum_M MPQPLGPLDEYPVHQLPQPIAWPGSSDRNFYDRSYFNAHD-RTGNIFVIS MUL_2484|M.ulcerans_Agy99 MPQPLGPLDEYPVHQLPQPIAWPGSSDRNFYDRSYFNAHD-RTGNIFVIS Mb3194|M.bovis_AF2122/97 MPQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHD-RTGNIFLIT Rv3169|M.tuberculosis_H37Rv MPQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHD-RTGNIFLIT Mflv_4498|M.gilvum_PYR-GCK ---MLGPMDEFPVHQIPQPIAWPGSSDRNFYDRSYFNAHD-RTGDIFVIT MAB_4483|M.abscessus_ATCC_1997 --MSLSPFDDYPIHQIADVVRHVGTSDRNFYDRYYFGCHGGRADLPYLIT MSMEG_4982|M.smegmatis_MC2_155 ---MLTPHDELLCHQLPTTFDHVDQSDLRWTERIVMYGFD-RSGDINVMT TH_0414|M.thermoresistible__bu ---VLTPYDELMCHQLSTTFDHVAQSDLRWTERVVIYGFD-PESLTSVMT MAV_5274|M.avium_104 --MGYSAADESFTHQLPTTFDQVHDADPTWSDRCYFFAAA-PDGTMLLAS Mvan_3398|M.vanbaalenii_PYR-1 --MGYSAADESFTHQLPTTFDQVHDPDPTWSDRCYFFAAS-PDGTMLLAS . *: **:. . .* : :* : . : : MMAR_1392|M.marinum_M GIGYYPNLGVKDAFLLIR-RGDTQTAVHLSDAIDQDRLH----------Q MUL_2484|M.ulcerans_Agy99 GIGYYPNLGVKDAFLLIR-RGDTQTAVHLSDAIDQDRLH----------Q Mb3194|M.bovis_AF2122/97 GIGYYPNLGVKDAFVLIR-RADIQTAVHLSDAIDSDRLH----------Q Rv3169|M.tuberculosis_H37Rv GIGYYPNLGVKDAFVLIR-RADIQTAVHLSDAIDSDRLH----------Q Mflv_4498|M.gilvum_PYR-GCK GLGYYPNLGVKDAFFLVR-RGDTQTAVHLSDAIDQDRLN----------Q MAB_4483|M.abscessus_ATCC_1997 GLGVYPNLGVTDAFASVR-NGDDIVVFRASRALGDDRAD----------L MSMEG_4982|M.smegmatis_MC2_155 GLARYPNRNVTDAYAMITRRDATARVVRMSTELNPETG--PLGS-----Y TH_0414|M.thermoresistible__bu GMARYPNRNVTDAYAMVT-VDGQAHVVRTSREIVPFGGENPGGTDGLTFW MAV_5274|M.avium_104 GYGNNPNTASGLGYVKVSLADGRHWDLLSGRPVTGDDRG---------EL Mvan_3398|M.vanbaalenii_PYR-1 GYGNNPNTATGLGYVKVSLADGRHWDLLAGRPVTGGDRD---------DL * . ** .: : . . : MMAR_1392|M.marinum_M HVNGYRIDVIEPLRKLRLVLD-----ETEGVSADLTWEGLFDVVAEQPHL MUL_2484|M.ulcerans_Agy99 HVNGYRIDVIEPLRKLRLVLD-----ETEGVSADLTWEGLFDVVAEQPHL Mb3194|M.bovis_AF2122/97 HVNGYRVEVVEPLRKLRIVLD-----ETEGVAADLTWEGLFDVVQEQPHV Rv3169|M.tuberculosis_H37Rv HVNGYRVEVVEPLRKLRIVLD-----ETEGVAADLTWEGLFDVVQEQPHV Mflv_4498|M.gilvum_PYR-GCK HVGNYRVEVIEPLRKLRIVLD-----ETDGIAADLTWEGLFDAVQEQPHI MAB_4483|M.abscessus_ATCC_1997 TVGPYRIEVVEGLKKVRVILEPGWHDATYDISFDLTYTGEIPASLEPGHY MSMEG_4982|M.smegmatis_MC2_155 SVGPYTYTIEEPLRTVRAVLAPNE----QGVSLDLRLRGQFPTYEQTPAF TH_0414|M.thermoresistible__bu SVGPYRYEVREPLRRVRATLEPG-----HGLALDVDFAGTFDCYEQAPAF MAV_5274|M.avium_104 RAGPMRWTCVEPLKKWRLDVGPN----NSGIEWELYYEPTAPMWELLPMK Mvan_3398|M.vanbaalenii_PYR-1 AAGPMRWTCVEPLKKWRLDVTPN----DSGIEWELYYEPTAPMWELLPMK .. * *: * : .: :: MMAR_1392|M.marinum_M LRS-GNRVTLDAQRFAQLGTWSGQIQVDGQQIDVDPATWIGSRDRSWGIR MUL_2484|M.ulcerans_Agy99 LRS-GNRVTLDAQRFAQLGTWSGQIQVDGQQIDVDPATWIGSRDRSWGIR Mb3194|M.bovis_AF2122/97 LRS-GNRVTLDAQRFAQLGTWSGRIVVDGERIAVDPATWLGSRDRSWGIR Rv3169|M.tuberculosis_H37Rv LRS-GNRVTLDAQRFAQLGTWSGRIVVDGERIAVDPATWLGSRDRSWGIR Mflv_4498|M.gilvum_PYR-GCK MRR-GTRVTLNAQRFAQVGSWSGQLSIDGTDIAVDPAQWIGTRDRSWGIR MAB_4483|M.abscessus_ATCC_1997 QRQ-LGRVMFDTSRFAQTGTWTGQLTIDGTTHELDGVNWSGNRDRSWGIR MSMEG_4982|M.smegmatis_MC2_155 HRS-RGRVSEDARRFYQNGQVEGWIEIDGERIEIDPGSWWFGRDHSWGIR TH_0414|M.thermoresistible__bu FRD-RGRVDEDARRFYQVGRASGGITVGDRRIDID-DSWHFGRDHSWGVR MAV_5274|M.avium_104 VSGPDGRLLADMYHMKEPGRWSGWVRIDGQRVSVD--GFHGGRDRTFGVR Mvan_3398|M.vanbaalenii_PYR-1 VRDNDGRVLADMYHMKEPGRWTGWVKIDGERISVD--GFHGGRDRTFGVR *: : :: : * * : :.. :* : **:::*:* MMAR_1392|M.marinum_M PVGEP----EPAGRPADPPFEGMWWLYVPMAFDDFAIVLIIQEEPSGFRS MUL_2484|M.ulcerans_Agy99 PVGEP----EPAGRPADPPFEGMWWLYVPMAFDDFAIVLIIQEEPSGFRS Mb3194|M.bovis_AF2122/97 PVGEP----EPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRS Rv3169|M.tuberculosis_H37Rv PVGEP----EPAGRPADPPFEGMWWLYVPLAFDDFAVVLIIQEEPDGFRS Mflv_4498|M.gilvum_PYR-GCK PIGEA----EPAGRPDDPPFEGMWWLYIPMAFDDFGIVIIIQEDPLGFRS MAB_4483|M.abscessus_ATCC_1997 PVGEG----EPAGRRAT-LAGGFFWLYNVISFPQYSIVFINQEDEHGNKV MSMEG_4982|M.smegmatis_MC2_155 NGPGGGSLSEGAHLQPQEIPDGTLYYMGIFQFDDELVHFAQRETSTGERW TH_0414|M.thermoresistible__bu RGGGGGDLPETSILQPRTIPDGVLYFMGIFEFDDRLVHFAQRETADGEVF MAV_5274|M.avium_104 VSDRID-----------------FWLWLDAGFGDHAIEAWVIESCDGTVL Mvan_3398|M.vanbaalenii_PYR-1 VSDKID-----------------FWLWLDAGFEDQAIEAWVIESSDGTVH : * : : * * MMAR_1392|M.marinum_M LNDCTRIWRDGR---VEQLGWPRVKIHYRSGTRIPTGATIDATRPDGTPV MUL_2484|M.ulcerans_Agy99 LNDCTRIWRDGR---VEQLGWPRVKIHYRSGTRIPTGATIDATRPDGTPV Mb3194|M.bovis_AF2122/97 LNDCTRIWRDGH---VEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPV Rv3169|M.tuberculosis_H37Rv LNDCTRIWRDGH---VEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPV Mflv_4498|M.gilvum_PYR-GCK LNDCTRVWKDGR---VEQLGWPRVKIQYRSGTRIPTGATVEATALDGSPL MAB_4483|M.abscessus_ATCC_1997 VSGARRVWRDPSKG-IEELGPIAHDITLIPGTREARSAVVTLG-----DI MSMEG_4982|M.smegmatis_MC2_155 QFEGEVLYPIETGRPAGTIIDVEHDLKFRDDLRVISGGTFTVHRGDRTTS TH_0414|M.thermoresistible__bu HYEGEMLAPSSTGRPSTPITRVSHDFTFRDDLRVISGGKVTIHTADGSAE MAV_5274|M.avium_104 YADGGITYADGT--LSKRFVKIEHEVEFDGERKRPARAVLVFTDEDGRAH Mvan_3398|M.vanbaalenii_PYR-1 YVDGGITRTDGT--LSKRFVKIDHDVTFDAGRKRPAGAVLVFTDEDGQTY : . : . . MMAR_1392|M.marinum_M HFDVESKLAVPIHVGGGYGGDSDWLHGMWKGEKFVERLTYGMTDPAIIAR MUL_2484|M.ulcerans_Agy99 HFDVESKLAVPIHVGGGYGGDSDWLHGMWKGEKFVERLTYGMTDPAIIAR Mb3194|M.bovis_AF2122/97 HFDVESKLAVPTHVGGGYGGDSDWSHGMWKGEKFVERRTYDMTDPTIIAR Rv3169|M.tuberculosis_H37Rv HFDVESKLAVPTHVGGGYGGDSDWSHGMWKGEKFVERRTYDMTDPTIIAR Mflv_4498|M.gilvum_PYR-GCK HFDVESKLAVPIHVGGGYGGDSDWLHGVWKGPNFTERLTYDMTDPAVIGR MAB_4483|M.abscessus_ATCC_1997 TITADIVLPHYFGFGTGYGLDPDWRHGMWQGDLVVQGKRYKTAELDATLK MSMEG_4982|M.smegmatis_MC2_155 TIEVRPMTDFWPGLAG-YMEVDGYASGHWRGRDFIDGFTADIGDIDVVKP TH_0414|M.thermoresistible__bu DITITPLTGFWPGFAG-YDEYRGYASGHWRGPSYVDSFVVDTTDPAEVGQ MAV_5274|M.avium_104 RVVAEAPHPQVNAYYGLPMAHCHYED--LGGGSYFIHFAWDSSDPEQLSE Mvan_3398|M.vanbaalenii_PYR-1 RVTADSPHRHVNAYYGLPMSHCRYQD--LGDGGYFIHFRWDSDDAGQLAE . : . : MMAR_1392|M.marinum_M SGFGVIDHVGRAVCRDGDTDPVEGWGLYEHGALGRHDPSGFSDWLTVAP- MUL_2484|M.ulcerans_Agy99 SGFGVIDHVGRAVCRDGDTDPVEGWGLYEHGALGRHDPSGFSDWLTVAP- Mb3194|M.bovis_AF2122/97 AGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGRHDPSGFADWSTLAP- Rv3169|M.tuberculosis_H37Rv AGFGVIDHVGRALCRDGDGNPVQGWGLFEHGALGRHDPSGFADWSTLAP- Mflv_4498|M.gilvum_PYR-GCK AGFGVIDHVGRAVCREADGTEREGWGLFEHGALGRHDPSGFADWLTVAP- MAB_4483|M.abscessus_ATCC_1997 L-LCPVDNLATFRLIEN-GVETHGSGLFEFGPIGPHKPSGFTGFVDTHQE MSMEG_4982|M.smegmatis_MC2_155 VSFLSETLCE--VSMDSGSGPKIGHGLVEMVFVGAYPRYGYTGW------ TH_0414|M.thermoresistible__bu VSLLSETFCR--VRC----GDAVGHGLVEMVFVGRNERYGYAGY------ MAV_5274|M.avium_104 T---EDKSMALDQLMRFERDGHTGWGIFELLLGGQGYRR-YPNWRAMDMS Mvan_3398|M.vanbaalenii_PYR-1 T---EDKSMALDQLMRFDFDGRTGWGVFELLMGGAGYRR-YPNWPAMDMT * *: * * :..: MMAR_1392|M.marinum_M --------------------- MUL_2484|M.ulcerans_Agy99 --------------------- Mb3194|M.bovis_AF2122/97 --------------------- Rv3169|M.tuberculosis_H37Rv --------------------- Mflv_4498|M.gilvum_PYR-GCK --------------------- MAB_4483|M.abscessus_ATCC_1997 RDSDS---------------- MSMEG_4982|M.smegmatis_MC2_155 --------------------- TH_0414|M.thermoresistible__bu --------------------- MAV_5274|M.avium_104 AFTQDKTPVDRLPADGDGADR Mvan_3398|M.vanbaalenii_PYR-1 SFTQDKTPVDRLQS-------