For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVVGADVHKHTHTFVAVDEVGRKLGEKTVKALTSGHAEAVMWARERFGAQVVWAIEDCRHLSARLERDLL TAGQQVVRVPPKLMAQARASARTRGKLKRPGFPGGSGYWIPIKGWSVRYAS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_5036 | - | - | 100% (122) | transposase |
| M. avium 104 | MAV_1059 | - | 1e-51 | 100.00% (97) | putative transposase |
| M. avium 104 | MAV_1872 | - | 1e-05 | 57.14% (28) | amidohydrolase 2 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3360 | - | 1e-40 | 76.29% (97) | transposase |
| M. gilvum PYR-GCK | Mflv_0450 | - | 4e-36 | 72.16% (97) | transposase IS116/IS110/IS902 family protein |
| M. tuberculosis H37Rv | Rv3327 | - | 1e-40 | 76.29% (97) | transposase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6023 | - | 6e-08 | 36.08% (97) | transposase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3360|M.bovis_AF2122/97 -----MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAR
Rv3327|M.tuberculosis_H37Rv -----MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAR
MAV_5036|M.avium_104 -----MVVVGADVHKHTHTFVAVDEVGRKLGEKTVKALTSGHAEAVMWAR
Mflv_0450|M.gilvum_PYR-GCK -----MVIVGTDVHKRTHTFVAVDEVGRKLGEKVVPATTAGHRTAVAWAR
MSMEG_6023|M.smegmatis_MC2_155 MTPSQIVVIGADTHLDTIHLAALSETGKPLGDAEFPTRPSGYYVAVKWAQ
:*::*:*.* : :.* .*.*: **: . : .:*: *: **:
Mb3360|M.bovis_AF2122/97 EQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSR
Rv3327|M.tuberculosis_H37Rv EQFGLELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSR
MAV_5036|M.avium_104 ERFGAQVVWAIEDCRHLSARLERDLLTAGQQVVRVPPKLMAQARASARTR
Mflv_0450|M.gilvum_PYR-GCK EQFGDELLWGIEDCRNLSARLEIDLLGMAQSAVRVAPKLMSQSRACARTR
MSMEG_6023|M.smegmatis_MC2_155 S-FGTVTLAGVEGTNSYGAGLTRALQDGGIDVVEVN----RPDRAARRRR
. ** : .:*. . .* * * . ..*.* * . * *
Mb3360|M.bovis_AF2122/97 GKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSA
Rv3327|M.tuberculosis_H37Rv GKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSA
MAV_5036|M.avium_104 GK------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK GKSDPIDALAVAHAVLRHPDLPVAAHDEVSRELKLLTDRREDLVAQRTST
MSMEG_6023|M.smegmatis_MC2_155 GKSDPLDAYAAARTALSGHGLAAPKDERTLALSALLTARRGAVKAHTAAT
**
Mb3360|M.bovis_AF2122/97 INRLRWLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAEL
Rv3327|M.tuberculosis_H37Rv INRLRWLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAEL
MAV_5036|M.avium_104 --------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK INRLRQRVHELDPAAEPNPGSLHRPTPCATLAAWLNTQTGILSELARDEL
MSMEG_6023|M.smegmatis_MC2_155 NQIQSLLVTAPSELRECYRRYTTRGLVKELARCRPTAHTDPTAVAVLTAL
Mb3360|M.bovis_AF2122/97 TDIIR----LTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEA
Rv3327|M.tuberculosis_H37Rv TDIIR----LTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEA
MAV_5036|M.avium_104 --------------------------------LKRPG-------------
Mflv_0450|M.gilvum_PYR-GCK ADIVR----LSEAINAVAARIGERVREVAPTLLALPGCGELTAAKILGET
MSMEG_6023|M.smegmatis_MC2_155 KALAYRAQFLHHQEHELTEQIHTLTQQMNPGLRAAHGVGPDTAAALLITA
*
Mb3360|M.bovis_AF2122/97 -AGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRI
Rv3327|M.tuberculosis_H37Rv -AGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRI
MAV_5036|M.avium_104 ------FPGGSGY-----WIPIKGWS------VRYAS-------------
Mflv_0450|M.gilvum_PYR-GCK -ATVSRFRSEAAFARHTGTAPIPVWSGNTAGRVRLSRSGNRQLNAALHRI
MSMEG_6023|M.smegmatis_MC2_155 GMNPHRLRSEAAFAALCGAAPVPASSGKTT-RHRLSRGGDRTANNALYRI
: . :.: *: * * :
Mb3360|M.bovis_AF2122/97 ALTQIRMTDSRGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQ
Rv3327|M.tuberculosis_H37Rv ALTQIRMTDSRGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQ
MAV_5036|M.avium_104 --------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK AITQIRLTDSAGQRYYRKRLAEGKATKEALRCLKRQLARIVYRHLHTDEN
MSMEG_6023|M.smegmatis_MC2_155 ALVRMSN-DPRTPDYVARQTANGRSKIEIIRLLKRAVAREVFRLLSQPCA
Mb3360|M.bovis_AF2122/97 PSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRA
Rv3327|M.tuberculosis_H37Rv PSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRA
MAV_5036|M.avium_104 --------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK TRKTKPHNNAQTAA------------------------------------
MSMEG_6023|M.smegmatis_MC2_155 IDDYSDLRPARQAKNITLTTVANHLDVWPNDISRLERGLKRDDTLAANYR
Mb3360|M.bovis_AF2122/97 LYRIAKRRFGEVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVREL
Rv3327|M.tuberculosis_H37Rv LYRIAKRRFGEVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVREL
MAV_5036|M.avium_104 --------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_6023|M.smegmatis_MC2_155 EYLSAA--------------------------------------------
Mb3360|M.bovis_AF2122/97 AVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYATSSKFSDDERA
Rv3327|M.tuberculosis_H37Rv AVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYATSSKFSDDERA
MAV_5036|M.avium_104 --------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_6023|M.smegmatis_MC2_155 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 AIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNS
Rv3327|M.tuberculosis_H37Rv AIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNS
MAV_5036|M.avium_104 --------------------------------------------------
Mflv_0450|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_6023|M.smegmatis_MC2_155 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 ALGITEQGFNSGDACRVPWAAPDVPSAESR
Rv3327|M.tuberculosis_H37Rv ALGITEQGFNSGDACRVPWAAPDVPSAESR
MAV_5036|M.avium_104 ------------------------------
Mflv_0450|M.gilvum_PYR-GCK ------------------------------
MSMEG_6023|M.smegmatis_MC2_155 ------------------------------